BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0474.p (1048 letters) Database: BlastDatabases/690/690 3295 sequences; 1,000,347 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|134095880|ref|YP_001100955.1| aminoglycoside/multidrug efflux... 1836 0.0 gi|134095559|ref|YP_001100634.1| aminoglycoside/multidrug efflux... 1164 0.0 gi|134094275|ref|YP_001099350.1| multidrug ABC transporter membr... 378 e-105 gi|134093332|ref|YP_001098407.1| putative acriflavin resistance/... 289 5e-79 gi|134093787|ref|YP_001098862.1| RND divalent metal cation efflu... 264 2e-71 >gi|134095880|ref|YP_001100955.1| aminoglycoside/multidrug efflux pump [Herminiimonas arsenicoxydans] Length = 1049 Score = 1836 bits (4756), Expect = 0.0, Method: Compositional matrix adjust. Identities = 912/1048 (87%), Positives = 978/1048 (93%) Query: 1 MGKFFIDRPVFAWVLAIFIMLAGALAITGLPVSQYPNIAPPTIVVTATYPGATAQTLDDS 60 MGKFFIDRPVFAWVLAIFIMLAGALAIT LPVSQYPNIAPPTIV+TATYPGATAQTLDDS Sbjct: 1 MGKFFIDRPVFAWVLAIFIMLAGALAITSLPVSQYPNIAPPTIVITATYPGATAQTLDDS 60 Query: 61 VTSLIEQEMNGADGLQYIESQSQANGQVQITVTFSPETNPDLAAVDVQNRLKRVEARLPA 120 VTSLIEQEMNGADGLQY+ESQSQANGQVQITVTFSPETNPDLAAVDV NRLKRVEARLPA Sbjct: 61 VTSLIEQEMNGADGLQYVESQSQANGQVQITVTFSPETNPDLAAVDVSNRLKRVEARLPA 120 Query: 121 AVTQQGVQVTKSRSNFLLFIGLSSTDGKLDPVALGDYLSRNVLNEIKRVPGVGQAQLFGT 180 AVTQQGVQV K+RSNFL+FIGLSSTDG+LDPVALGDYLSRNVLNE+KRVPGVGQAQLFGT Sbjct: 121 AVTQQGVQVAKARSNFLMFIGLSSTDGRLDPVALGDYLSRNVLNEVKRVPGVGQAQLFGT 180 Query: 181 ERAMRIWIDPNKLIGLNLTPGDVTAAITAQNALVAGGTLGALPSPGTQQIAATVVVNGQL 240 ERAMRIWIDPNKL+GLNLTP +VTAAI QNALVAGG LG LPSP +QQI+ATVVVNGQL Sbjct: 181 ERAMRIWIDPNKLVGLNLTPAEVTAAINTQNALVAGGILGDLPSPSSQQISATVVVNGQL 240 Query: 241 TSPEQFGNIVLRANADGSTVRLRDVARVEMGGQSYDTSGRLDGKPSSFIGVQLSPTANAL 300 +SPE+FG I+LRAN DGS+VRLRDVAR+E+GGQSY TSGRLDG P+SFIGVQLSPTANAL Sbjct: 241 SSPEEFGKIILRANKDGSSVRLRDVARIEVGGQSYQTSGRLDGNPTSFIGVQLSPTANAL 300 Query: 301 GTATAVHKKMEELAKYFPAGVKYTIPYDTSKFVKISIEEVVKTLIEAIVLVFLVMFLFLQ 360 GTATAVHKKME+LA+YFPAGVKYT+PYDTSKFVKISIEEVVKTLIEAI+LVFLVM+LFLQ Sbjct: 301 GTATAVHKKMEDLARYFPAGVKYTVPYDTSKFVKISIEEVVKTLIEAIILVFLVMYLFLQ 360 Query: 361 NIRYTIIPTIVVPVALLGTFATLLLFGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM 420 NIRYT+IPTIVVPVALLGTFATLL+FGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM Sbjct: 361 NIRYTLIPTIVVPVALLGTFATLLVFGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM 420 Query: 421 SEEGLSPPEATRKAMGQISGALIGITLVLIAVFIPMAFFGGAVGAIYRQFSLSMVASMVF 480 SEEGLSP +ATRKAMGQI+GA+IGITLVLIAVF+PMAFFGGAVGAIYRQFSLSMVASMVF Sbjct: 421 SEEGLSPRDATRKAMGQITGAIIGITLVLIAVFLPMAFFGGAVGAIYRQFSLSMVASMVF 480 Query: 481 SVLMAFTLTPALCATILKPVEKGHHHEKKGFFGWFNRKFNSTASGYQGVISKMLNKAGRY 540 S LMAFTLTPALCATILKPVEKGHHHEK GFFGWFNR F+ T+ YQG I KML K RY Sbjct: 481 SALMAFTLTPALCATILKPVEKGHHHEKGGFFGWFNRIFHKTSLSYQGFIGKMLTKTTRY 540 Query: 541 MIVYVVIVACVGLLYVRLPASFLPNEDQGYIITNVQLPPGASTARTLEVVKKIEQYYLKD 600 MIVY +IVACVGLLY RLPASFLP+EDQGYIITNVQLP GAS+ RTLEV+K+IE+YYLK Sbjct: 541 MIVYGLIVACVGLLYARLPASFLPSEDQGYIITNVQLPAGASSGRTLEVLKQIEEYYLKQ 600 Query: 601 TAVEHAIAVLGYSFSGNGQNAALVFTPLKDWSERDKSQSADAIAGKAFGAFSQIKDAIVF 660 AVEH I++ G+SFSGNGQNA LVFTP DWS+R K +ADAIAG+AFGAFSQIKDAIVF Sbjct: 601 PAVEHVISISGFSFSGNGQNAGLVFTPFIDWSKRGKEDTADAIAGRAFGAFSQIKDAIVF 660 Query: 661 PLNPPPIPELGNATGFTFRLQDRAGLGHAALVQARNQILGMAAQSKVLAGVRPEGLEDAP 720 PLNPPPI ELGNATGFTFRLQDR GLGH ALV ARNQ+LGMA QSK+LAGVRPEGLEDAP Sbjct: 661 PLNPPPIRELGNATGFTFRLQDRGGLGHDALVAARNQLLGMAGQSKILAGVRPEGLEDAP 720 Query: 721 QLQLDIDRDKANALGVPFSTINSVLSTALGSSYVNDFPNQGRQQRVIVQADANQRLQPED 780 QLQLDIDRDKANALGVPF++INSVLST+LGSSYVNDFPNQGRQQRVIVQADA +RLQ +D Sbjct: 721 QLQLDIDRDKANALGVPFASINSVLSTSLGSSYVNDFPNQGRQQRVIVQADAPRRLQADD 780 Query: 781 LTNLYARNSSGGMVPFSAFVTAKWINGPVQLIRYNGYPAMKIAGGAAPGRSTGEAMAEME 840 LT LYAR+++G MVPFS+F+T+KWI GPVQLIRYNGYPAMKI+GG PG STG+AM EME Sbjct: 781 LTKLYARSTTGAMVPFSSFITSKWITGPVQLIRYNGYPAMKISGGVKPGFSTGDAMKEME 840 Query: 841 SFVAKLPPGFGFEWTGQSLEEKTSGNQAPALYALSLIAVFLVLAALYESTSIPLAVMLVV 900 + V KLP G G+EWTGQSLEE+TSGNQAPALYALSLIAVFLVLAALYESTSIPL+VMLVV Sbjct: 841 ALVQKLPAGIGYEWTGQSLEEQTSGNQAPALYALSLIAVFLVLAALYESTSIPLSVMLVV 900 Query: 901 PLGILGALLGVTLRAMPNDVYFKVGMIAVVGLSAKNAILIIEFAKDLQAQGMGLIEATLE 960 PLGILGALLGVTLR MPNDVYFKVGMIAVVGLSAKNAILIIEFAKDLQAQG GLIEATLE Sbjct: 901 PLGILGALLGVTLRGMPNDVYFKVGMIAVVGLSAKNAILIIEFAKDLQAQGKGLIEATLE 960 Query: 961 AVHLRFRPIIMTSLAFILGVLPLAIASGAGSASQRAIGTGVMGGMITATVLAVFLVPIFF 1020 AVHLRFRPIIMTSLAFILGVLPL IASGAGSASQRAIGTGVMGGMITATVLAVFLVP+FF Sbjct: 961 AVHLRFRPIIMTSLAFILGVLPLVIASGAGSASQRAIGTGVMGGMITATVLAVFLVPVFF 1020 Query: 1021 VVVRKVFKGSERQRKFDAEHSPKIDSGE 1048 VVVR FKGS+RQR+ A H + + E Sbjct: 1021 VVVRTFFKGSDRQRRMYAGHKQRNEDEE 1048 >gi|134095559|ref|YP_001100634.1| aminoglycoside/multidrug efflux pump [Herminiimonas arsenicoxydans] Length = 1053 Score = 1164 bits (3011), Expect = 0.0, Method: Compositional matrix adjust. Identities = 590/1030 (57%), Positives = 759/1030 (73%), Gaps = 3/1030 (0%) Query: 1 MGKFFIDRPVFAWVLAIFIMLAGALAITGLPVSQYPNIAPPTIVVTATYPGATAQTLDDS 60 M +FFIDRP+FAWVL+I IMLAG LAI LP+SQYP IAPPT+ + ATYPGA+A+ +++S Sbjct: 1 MARFFIDRPIFAWVLSIIIMLAGGLAIFTLPISQYPTIAPPTVSIQATYPGASAKVVENS 60 Query: 61 VTSLIEQEMNGADGLQYIESQSQANGQVQITVTFSPETNPDLAAVDVQNRLKRVEARLPA 120 VT +IEQ M G DGL Y+ + S A G Q+T+TF +T+PD+A V VQN+L+ LP Sbjct: 61 VTQIIEQNMKGLDGLIYMSATSSATGSAQLTLTFDNKTDPDIAQVQVQNKLQLASPLLPQ 120 Query: 121 AVTQQGVQVTKSRSNFLLFIGLSSTDGKLDPVALGDYLSRNVLNEIKRVPGVGQAQLFGT 180 V +QGV V+K+ S FL +G S DG +D + DY++ N+++ + RVPGVG Q+FG+ Sbjct: 121 EVQRQGVVVSKAASGFLQVVGFVSEDGSMDKDDISDYVAANLVDPLSRVPGVGNIQVFGS 180 Query: 181 ERAMRIWIDPNKLIGLNLTPGDVTAAITAQNALVAGGTLGALPSPGTQQIAATVVVNGQL 240 + +MRIW+DPNKL L D+ A I AQNA VA G LG PS QQ+ AT+ +L Sbjct: 181 KYSMRIWLDPNKLDTYKLATTDIIATIRAQNAQVAVGQLGGAPSAPGQQLNATISAQDRL 240 Query: 241 TSPEQFGNIVLRANADGSTVRLRDVARVEMGGQSYDTSGRLDGKPSSFIGVQLSPTANAL 300 +PEQF IV+R+N DGST++L D+ARVE+G ++Y+T R +GKP++ + + LS ANAL Sbjct: 241 QTPEQFRAIVIRSNPDGSTLKLGDIARVELGAENYETISRYNGKPATGVLISLSTGANAL 300 Query: 301 GTATAVHKKMEELAKYFPAGVKYTIPYDTSKFVKISIEEVVKTLIEAIVLVFLVMFLFLQ 360 TA + K+EEL YFPAG+ +P+DT+ F+ +SI+ VV TL+EAI LVFLVM+LF+Q Sbjct: 301 DTAVGIKNKLEELKPYFPAGLTAVVPFDTTPFISVSIKGVVVTLLEAIALVFLVMYLFMQ 360 Query: 361 NIRYTIIPTIVVPVALLGTFATLLLFGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM 420 NIR T+IPTI VPV LLGTF L GFSIN+LTMF MVLAIG+LVDDAIVVVENVERIM Sbjct: 361 NIRATLIPTIAVPVVLLGTFGILAALGFSINMLTMFAMVLAIGLLVDDAIVVVENVERIM 420 Query: 421 SEEGLSPPEATRKAMGQISGALIGITLVLIAVFIPMAFFGGAVGAIYRQFSLSMVASMVF 480 +EEGLSP EATRK+M QI+GAL+GI LVL AVF+PMAF GG+ G IYRQF+ ++V++M Sbjct: 421 TEEGLSPLEATRKSMDQITGALVGIALVLSAVFVPMAFLGGSTGIIYRQFTATIVSAMAL 480 Query: 481 SVLMAFTLTPALCATILKPVEKGHHHEKKGFFGWFNRKFNSTASGYQGVISKMLNKAGRY 540 SVL+A LTPALCAT+LKPV+KG H + GFF WFNR F+ ++ YQ + +L + R+ Sbjct: 481 SVLVAVVLTPALCATMLKPVKKGEHGKTTGFFAWFNRNFDRSSVKYQSGVRGILGRGKRF 540 Query: 541 MIVYVVIVACVGLLYVRLPASFLPNEDQGYIITNVQLPPGASTARTLEVVKKIEQYYLKD 600 M +++ ++ + LL+VRLP+SFLPNEDQG + + +Q P GA+ RTLE +KK+E ++L D Sbjct: 541 MAIFLALIVVMVLLFVRLPSSFLPNEDQGILFSLIQTPVGATQERTLEAIKKVEHHFLTD 600 Query: 601 --TAVEHAIAVLGYSFSGNGQNAALVFTPLKDWSERDKSQSA-DAIAGKAFGAFSQIKDA 657 AVE V G+SF+G GQN + F LKDWSER ++S DA+AG+A GAFSQIKDA Sbjct: 601 EKDAVESIFTVQGFSFAGTGQNNGMAFIKLKDWSERTSAESQIDAVAGRAMGAFSQIKDA 660 Query: 658 IVFPLNPPPIPELGNATGFTFRLQDRAGLGHAALVQARNQILGMAAQSKVLAGVRPEGLE 717 F PP IPELG A GF+F L+D A LGH ALVQARNQ+LG AAQSK+LA VRP G E Sbjct: 661 FAFAFAPPAIPELGTAAGFSFFLKDNANLGHDALVQARNQLLGAAAQSKLLAKVRPNGQE 720 Query: 718 DAPQLQLDIDRDKANALGVPFSTINSVLSTALGSSYVNDFPNQGRQQRVIVQADANQRLQ 777 D+PQ ++DID KA+A G+ + INS LSTA G Y++DF ++GR +RV +QADA R+ Sbjct: 721 DSPQFRIDIDTQKASAQGLSIADINSTLSTAWGGQYIDDFIDRGRVKRVYMQADAPFRMV 780 Query: 778 PEDLTNLYARNSSGGMVPFSAFVTAKWINGPVQLIRYNGYPAMKIAGGAAPGRSTGEAMA 837 PED RN+ G MVPFSAF +A+W G +L RYNG AM+I G AAPG S+G +M Sbjct: 781 PEDFKLWSVRNNQGQMVPFSAFASARWEYGSPRLERYNGVSAMEIQGEAAPGISSGASMD 840 Query: 838 EMESFVAKLPPGFGFEWTGQSLEEKTSGNQAPALYALSLIAVFLVLAALYESTSIPLAVM 897 E+E +LP GFG EWT S +E+ +G+Q LY LSL+ VFL LAALYES +IP AV+ Sbjct: 841 EIERLAGQLPAGFGIEWTALSYQERQAGSQTTLLYTLSLLIVFLCLAALYESWTIPTAVL 900 Query: 898 LVVPLGILGALLGVTLRAMPNDVYFKVGMIAVVGLSAKNAILIIEFAKDLQAQGMGLIEA 957 LV PLGILGA+L TL M DVYF+V M+ VGL++KNAILI+EFAK GM LI+A Sbjct: 901 LVAPLGILGAVLANTLAGMERDVYFQVAMLTTVGLTSKNAILIVEFAKANLESGMELIDA 960 Query: 958 TLEAVHLRFRPIIMTSLAFILGVLPLAIASGAGSASQRAIGTGVMGGMITATVLAVFLVP 1017 TL+AV +R RPIIMTSLAF LGVLPLA+ASGAGS +QRAIGTGV+GGMI T+L +F +P Sbjct: 961 TLQAVRVRLRPIIMTSLAFGLGVLPLALASGAGSGAQRAIGTGVVGGMIVGTLLGIFFIP 1020 Query: 1018 IFFVVVRKVF 1027 +FFV+V ++F Sbjct: 1021 LFFVLVERLF 1030 >gi|134094275|ref|YP_001099350.1| multidrug ABC transporter membrane protein [Herminiimonas arsenicoxydans] Length = 1034 Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust. Identities = 308/1050 (29%), Positives = 521/1050 (49%), Gaps = 54/1050 (5%) Query: 1 MGKFFIDRPVFAWVLAIFIMLAGALAITGLPVSQYPNIAPPTIVVTATYPGATAQTLDDS 60 + + I RPV +L+I +++ G LP++ P+ P I VTA+ PGA+ + + S Sbjct: 3 ISELCIRRPVMTVLLSIAVVVVGFFCYFKLPIAALPSYDTPVINVTASLPGASPEVMASS 62 Query: 61 VTSLIEQEMNGADGLQYIESQSQANGQVQITVTFSPETNPDLAAVDVQNRLKRVEARLPA 120 V + +E++ + G+ I S S G I + F + D AAVDVQ L R + LP Sbjct: 63 VATPLEKQFSTIAGVATISSSSTL-GNTSIVLEFDQNRDIDAAAVDVQAALLRAQRSLPE 121 Query: 121 AVTQQGVQVTKSRSNFLLFIGLSSTDGKLDPVALGDYLSRNVLNEIKRVPGVGQAQLFGT 180 + K + L+ T L L DY + + + GV Q Q++G Sbjct: 122 EMNDLPAY-RKVNPADAAILLLALTSPSLSLSELNDYAENLISPSLSTIDGVAQVQVYGQ 180 Query: 181 ER-AMRIWIDPNKLIGLNLTPGDVTAAITAQNALVAGGTLGALPSPGTQQIAATVVVNGQ 239 R A+RI + P++L N+T ++ A+I A NA +G L P + T+ N Q Sbjct: 181 RRYAVRIKVKPSELAARNMTLDEIAASIRAANA---NSPVGVLDGP---RQTLTLQANRQ 234 Query: 240 LTSPEQFGNIVLRANADGSTVRLRDVARVEMGGQSYDTSGRLDGKPSSFIGVQLSPTANA 299 L + E FGN+V+ +++ G T RL+DVA VE +S + ++GKPS + VQ P AN Sbjct: 235 LQNAEAFGNLVI-SSSKGQTTRLKDVATVEDSVESTKSGSWVNGKPSIVLAVQRQPNANT 293 Query: 300 LGTATAVHKKMEELAKYFPAGVKYTIPYDTSKFVKISIEEVVKTLIEAIVLVFLVMFLFL 359 + AV + PA + + D S ++ +I +V TL+ I+LV LV+FLFL Sbjct: 294 VAVVDAVKHTLPLFQSQMPASIDLQVLNDRSVSIREAIHDVKLTLLLTILLVVLVIFLFL 353 Query: 360 QNIRYTIIPTIVVPVALLGTFATLLLFGFSINVLTMFGMVLAIGILVDDAIVVVENVERI 419 + + T IP + +P++L+G A + GFS++ +++ G+ +A+G++VDDAIV++EN+ R Sbjct: 354 KRLTATAIPVLSLPISLIGCCALMYWMGFSLDNVSLLGITIAVGLVVDDAIVMLENIVRH 413 Query: 420 MSEEGLSPPEATRKAMGQISGALIGITLVLIAVFIPMAFFGGAVGAIYRQFSLSMVASMV 479 + E+G+ P A K ++S +I I++ L+AVFIP+ F G +G + +F+ + +++ Sbjct: 414 I-EDGMEPLAAALKGSREVSFTIISISISLVAVFIPIFFMPGVIGLLLHEFAAVVSLAVL 472 Query: 480 FSVLMAFTLTPALCATILKPVEKGHHHE-----KKGFFGWFNRKFNSTASGYQGVISKML 534 S +M+ TL P LC+ LK + GH ++ + F + FN + Y + L Sbjct: 473 VSAVMSLTLVPMLCSRFLKHEKAGHENDAVQPQENWLIRSFEKVFNRLLASYTRALDWSL 532 Query: 535 NKAGRYMIVYVVIVACVGLLYVRLPASFLPNEDQGYIITNVQLPPGASTARTLEVVKKIE 594 +++ L++ +P F P ED G I ++ P AS +++V + Sbjct: 533 AHRTTMLVLAAGTFVLTAYLFITIPKGFFPTEDIGQISVTIEGPQDASYPTMVKLVTAVG 592 Query: 595 QYYLKDTAVEHAIAVLGYSFSGNGQNAALVFTPLKDWSERDKSQSADAIAGKAFGAFSQI 654 D VE A S GN +F LK + R+ DA+ + Sbjct: 593 TIIQNDPNVETATMRTRDSNVGN------MFVGLKPRTAREP---MDAVLRGLRAKVKAV 643 Query: 655 KDAIVFPLNPPPIPELGNATG---FTFRLQDRAGLGHAALVQARNQILGMAAQSKVLAGV 711 V+ L P LG T F + LQ R L + A+ K+ A + Sbjct: 644 PGVTVY-LTPVQNLRLGGRTSKSQFQYVLQS-----------VRADELNVWAE-KIQAEM 690 Query: 712 RPEG----LEDAPQLQ-----LDIDRDKANALGVPFSTINSVLSTALGSSYVNDFPNQGR 762 R +G + QL+ +DI+RD+AN GV + I + L +A G V+ Sbjct: 691 RADGSFIDVTSDSQLKGLQAVVDINRDRANEAGVGIADIRTALYSAYGDRQVSTIYTSSN 750 Query: 763 QQRVIVQADANQRLQPEDLTNLYARNSSGGMVPFSAFVTAKWINGPVQLIRYNGYPAMKI 822 VI+Q ++ R DL+ +Y R+ +G +VP + T K GP+ + A+ I Sbjct: 751 SYSVILQDESVGRQDESDLSKIYLRSKTGVLVPLLSVATVKRTAGPISVNHQGQLQAITI 810 Query: 823 AGGAAPGRSTGEAMAEMESF--VAKLPPGFGFEWTGQSLEEKTSGNQAPALYALSLIAVF 880 + APG G+A +++ LP + G + ++S AL L+L+ ++ Sbjct: 811 SFNLAPGIPLGDATRKVDQIKDAISLPSSIVTNYAGDAAVFQSSQASQIALVVLALVVIY 870 Query: 881 LVLAALYESTSIPLAVMLVVPLGILGALLGVTLRAMPNDVYFKVGMIAVVGLSAKNAILI 940 ++L LYES P+ ++ +P +GALL + + + +G++ ++GL KNAI++ Sbjct: 871 ILLGVLYESYIHPVTILAGLPSAAVGALLTLRIFGFELTMIAMIGILLLIGLVKKNAIMM 930 Query: 941 IEFAKDLQ-AQGMGLIEATLEAVHLRFRPIIMTSLAFILGVLPLAIASGAGSASQRAIGT 999 I+FA Q QG+ +EA A LRFRPI+MT+LA +G LP+A+ GAG+ ++ +G Sbjct: 931 IDFALAAQREQGLTPLEAIRTACILRFRPIMMTTLAAAVGALPIALGLGAGAELRQPLGL 990 Query: 1000 GVMGGMITATVLAVFLVPIFFVVVRKVFKG 1029 V+GG++ + V+ + + P+ ++ + + F G Sbjct: 991 AVVGGLMVSQVITLLITPVIYLFLDR-FSG 1019 >gi|134093332|ref|YP_001098407.1| putative acriflavin resistance/multidrug efflux transporter AcrB [Herminiimonas arsenicoxydans] Length = 1024 Score = 289 bits (740), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 282/1039 (27%), Positives = 477/1039 (45%), Gaps = 78/1039 (7%) Query: 14 VLAIFIMLAGALAITGLPVSQYPNIAPPTIVVTATYPGATAQTLDDSVTSLIEQEMNGAD 73 +L + + LAG L+ V +P+I P + V+A GA L+ V IE + Sbjct: 1 MLFVLLGLAGLLSFKSAAVQDFPDIELPIVTVSAALSGAAPAQLETEVARKIEDSVATLQ 60 Query: 74 GLQYIESQSQANGQVQITVTFSPETNPDLAAVDVQNRLKRVEARLPAAVTQQGVQVTKSR 133 G++ I ++ +G V +TV F E N A DV++ + V A LPA + V + Sbjct: 61 GVKNIYTKV-LDGLVTVTVEFILEKNLSDAVNDVRDAVASVRADLPAELRDPTVTKASTA 119 Query: 134 SNFLL-FIGLSSTDGKLDPVALGDYLSRNVLNEIKRVPGVGQAQLFG-TERAMRIWIDPN 191 +L F ++ LD L ++ V I VPG+G + G R +R+ +D Sbjct: 120 GRVVLTFTAAAAPGSALDEQELSWFVDNTVSKAILAVPGIGAVKRVGGVTREVRVELDTA 179 Query: 192 KLIGLNLTPGDVTAAITAQNALVAGGTLGALPSPGTQQIAATVVVNGQLTSPEQFGNIVL 251 K+ LN+ DV+ + GG + + + ATV +L + +I L Sbjct: 180 KMAALNVAAVDVSRRLKLVQQEAPGGRGDVSGAEQSVRTIATVQTAAELAA----MDIPL 235 Query: 252 RANADGSTVRLRDVARVEMGGQSYDTSGRLDGKPSSFIGVQLSPT--ANALGTATAVHKK 309 ADG +RL VA V +S DGK + +G ++ T A+ L A Sbjct: 236 ---ADGHHIRLDRVATVTDTIAERRSSASQDGK--TVVGFEIFRTKGASELEVANGSRAA 290 Query: 310 MEELAKYFPAGVKYTIPYDTSKFVKISIEEVVKTLIEAIVLVFLVMFLFLQNIRYTIIPT 369 + L + +P V + + D +K V+ + E ++ L E L LV++ FL++ R T++ Sbjct: 291 VAALQERYP-NVVFKLAIDNAKPVEENFEASMELLYEGAFLAVLVVWWFLRDWRATLVAA 349 Query: 370 IVVPVALLGTFATLLLFGFSINVLTMFGMVLAIGILVDDAIVVVENVERIMSEEGLSPPE 429 +P++++ TF L FG+++N++T+ + L +G+LVDDAIV +EN+ R + G +P + Sbjct: 350 AALPLSVIPTFLGLAYFGYTLNMVTLLSLALVVGVLVDDAIVEIENISRHL-RMGKTPMQ 408 Query: 430 ATRKAMGQISGALIGITLVLIAVFIPMAFFGGAVGAIYRQFSLSMVASMVFSVLMAFTLT 489 A +A +I A+I T L+AVF+P AF G G ++QF + V +++ S+L+A LT Sbjct: 409 AAMEAADEIGMAVIATTFALVAVFLPTAFMAGIPGLFFKQFGWTAVLAILASLLVARLLT 468 Query: 490 PALCATILKPVEKGHHHEKKGFFGWFNRKFNSTASGYQGVISKMLNKAGRYMIVYVVIVA 549 P + A ILKP H EK G W +++ T + ++ L A I + + Sbjct: 469 PMMAAYILKPT--AHREEKDG---WLMQRYLKT---MRWCLTHRLTTAIASGIFFFGSIM 520 Query: 550 CVGLLYVRLPASFLPNEDQGYIITNVQLPPGASTARTLEVVKKIEQYYLKDTAVEHAIAV 609 V LL P F+P D+ NV+LPPG++ A T VV+ + ++ ++ A Sbjct: 521 LVPLL----PTGFVPAADRAQTQINVELPPGSTLAETTTVVEAVRTKIAENKNIKSVFAS 576 Query: 610 LGYSFSGNG---------QNAALVFTPLKDWSERDKSQSADAIAGKAFGAFSQIKDAIV- 659 +G SG+ + A L T ++K +A QI+ AI Sbjct: 577 IGGGSSGDAFAPGASAEARRAVLTITTTHRSDRKEKMAEIEA----------QIRTAIAD 626 Query: 660 -----FPLNPPPIPELGNATGFTFRLQDRAGLGHAALVQARN--QILGMAAQSKVLAGVR 712 F + PP + G R +D L A R + G+ + + VR Sbjct: 627 IPGARFTVGPP---DTGVKMQLVLRSEDPVALLTTAQKVERELRTLKGIGNVNSSASLVR 683 Query: 713 PEGLEDAPQLQLDIDRDKANALGVPFSTINSVLSTALGSSYVNDFP--NQGRQQ---RVI 767 PE + + D +A LGV ++I + A Y P N +Q RV Sbjct: 684 PE-------IIVRPDSARAADLGVTAASIGETVRVATAGDYDTSLPKMNLSERQVPIRVK 736 Query: 768 VQADANQRLQPEDLTNLYARNSSGGMVPFSAFVTAKWINGPVQLIRYNGYPAMKIAGGAA 827 + D L + + +N G V T +GP Q+ R N + + Sbjct: 737 LPDDVRADLSAIERLTVPGKN---GPVMLGNVATVTMESGPAQIDRLNR--SRNVTFDVE 791 Query: 828 PG-RSTGEAMAEMESF--VAKLPPGFGFEWTGQSLEEKTSGNQAPALYALSLIAVFLVLA 884 G RS G+ AE + + LPP G + E + N A+ ++ ++ VL Sbjct: 792 LGTRSLGDLNAEARALPTLQNLPPAVKIAELGDAQEMQALFNSFGLAMAIGVLCIYGVLV 851 Query: 885 ALYESTSIPLAVMLVVPLGILGALLGVTLRAMPNDVYFKVGMIAVVGLSAKNAILIIEFA 944 L++ P+ ++ +PL I GA + + L + +G+I ++G+ KN+IL++++A Sbjct: 852 LLFKDFMQPVTILAALPLSIGGAFVALLLTRSALSMPSMIGLIMLMGIVTKNSILLVDYA 911 Query: 945 KDLQAQGMGLIEATLEAVHLRFRPIIMTSLAFILGVLPLAIASGAGSASQRAIGTGVMGG 1004 + GM ++A ++A H R RPI+MT++A G+LPLA+ + + + V+GG Sbjct: 912 ILARKAGMNRVDALVDACHKRSRPIVMTTIAMGAGMLPLALGWVGDPSFRSPMAITVIGG 971 Query: 1005 MITATVLAVFLVPIFFVVV 1023 +IT+T+L++ +VP F + Sbjct: 972 LITSTLLSLLVVPAVFTYI 990 >gi|134093787|ref|YP_001098862.1| RND divalent metal cation efflux transporter [Herminiimonas arsenicoxydans] Length = 1063 Score = 264 bits (674), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 276/1055 (26%), Positives = 469/1055 (44%), Gaps = 93/1055 (8%) Query: 3 KFFIDRPVFAWVLAIFIMLAGALAITG---LPVSQYPNIAPPTIVVTATYPGATAQTLDD 59 +F ID+ W++ + + AL I LP+ P+I + + ++ PG + + Sbjct: 7 RFAIDQ---RWLIMLMTIGMAALGIYNYQKLPIDAVPDITNVQVQINSSAPGYSPLEAEQ 63 Query: 60 SVTSLIEQEMNGADGLQYIESQSQANGQVQITVTFSPETNPDLAAVDVQNRLKRVEARLP 119 +T +E M G L+ S S+ G Q+TV F T+ A V R++ + +LP Sbjct: 64 RITFPVETVMAGLPFLEQTRSISRY-GLSQVTVIFKEGTDIYFARQMVNERIQEAKEKLP 122 Query: 120 AAVTQQGVQVTKSRSNFLLFI-----GLSSTDGK-LDPVALGDYLSRNVLNEIKRVPGVG 173 V+ ++ ++ G DG P L + + +++ VPGV Sbjct: 123 PGVSPSMGPISTGLGEIYMWTVEAKTGALKPDGTPYTPTDLREIQDWIIKPQLRNVPGVT 182 Query: 174 QAQLFG-TERAMRIWIDPNKLIGLNLTPGDVTAAITAQNALVAGGTLGALPSPGTQQIAA 232 + G + ++ P+KLI L+ GD+ AA+ N V G + G Q + Sbjct: 183 EINTIGGNAKEFQVAPYPDKLIAHGLSLGDLVAALERNNNNVGAGYI---EKRGEQYL-- 237 Query: 233 TVVVNGQLTSPEQFGNIVLRANADGSTVRLRDVARVEMGGQSYDTSGRLDGKPSSFIGVQ 292 + GQ+T GNIV+ + G +R+RDVA V +G + + +GK V Sbjct: 238 -IRAPGQVTDITDIGNIVI-STRQGVPLRIRDVADVVIGNELRTGAATENGKEVVLGTVF 295 Query: 293 LSPTANALGTATAVHKKMEELAKYFPAGVKYTIPYDTSKFVKISIEEVVKTLIEAIVLVF 352 + N+ A AV KKM+E+ P G+ YD + V +I V K L+E +LV Sbjct: 296 MLIGENSRSVAAAVDKKMKEINLTLPKGIVADTVYDRTVLVDKAISTVKKNLMEGALLVI 355 Query: 353 LVMFLFLQNIRYTIIPTIVVPVALLGTFATLLLFGFSINVLTMFGMVLAIGILVDDAIVV 412 V+FLFL NIR II +V+P+A+L TF ++ S N++++ L GI++D A+V+ Sbjct: 356 AVLFLFLGNIRAAIITAMVIPLAMLFTFTGMVGNKVSANLMSLGA--LDFGIIIDGAVVI 413 Query: 413 VEN-VERIMSEEGLSPPEATRK--------AMGQISGALIGITLVLIAVFIPMAFFGGAV 463 VEN + R+ + L+ TR A + LI L+++ V++P+ G Sbjct: 414 VENCIRRLSHAQALAGRALTRTERFHEVFAASKEARRPLIFGQLIIMVVYLPIFALSGVE 473 Query: 464 GAIYRQFSLSMVASMVFSVLMAFTLTPALCATILKPVEKGHHHEKKGFFGWFNRKFNSTA 523 G ++ + ++V ++V +++++ T PA A ++ +K E + W R++ Sbjct: 474 GKMFHPMAFTVVIALVGAMILSLTFIPAAVALLIG--DKVSEKENR-LMVWSKRRYEPIL 530 Query: 524 SGYQGVISKMLNKAGRYMIVYVVIVACVGLLYVRLPASFLPNEDQGYIITNVQLPPGAST 583 ML+K IV VVIV GLL R+ + F+P+ ++G I + PG S Sbjct: 531 DWV------MLSKPLVLTIVGVVIVLS-GLLMTRMGSEFIPSLNEGDIALHAMRIPGTSL 583 Query: 584 ARTLEVVKKIEQYYLKDTAVEHAIAVLGYS------FSGNGQNAALVFTPLKDWSERDKS 637 + +E+ K++E+ V A LG + N + ++ P +W E +S Sbjct: 584 TQAIEMQKELERNIKDFPEVSRVFAKLGTAEIATDPMPPNVADTFVILKPQSEWPEPKRS 643 Query: 638 QSADAIAGKAFGAFSQIKDAIVFPLNPPPIPELGNATGFTFRLQDRA------------- 684 KD +V + GN FT +Q R Sbjct: 644 -----------------KDELVIAMQEAVSKVPGNNYEFTQPIQMRFNELISGVRSDVAV 686 Query: 685 ---GLGHAALVQARNQILGMAAQSKVLAGVRPEGLEDAPQLQLDIDRDKANALGVPFSTI 741 G A+ +QI + + A V+ E P L + IDR+K LGV + Sbjct: 687 KVFGDDMDAMNVTADQISDVLSSVPGAADVKVEQTTGLPMLTVKIDREKVARLGVNVGDV 746 Query: 742 NSVLSTALGSSYVNDFPNQGRQQRVIVQADANQRLQPEDLTNLYAR-----NSSGGMVPF 796 LS A+G ++ ++V+ + R E + + R + G + + Sbjct: 747 QEALSIAVGGREAGMLFEGDKRFDILVRLPDSVRNDIESIKKIPIRLPVLEGTQAGTLGY 806 Query: 797 SAF---VTAKWINGPVQLIRYNGYPAMKIAGGAAPGRSTGEAMAEMESFV---AKLPPGF 850 + T GP Q+ R NG + I GR G + E + V K+P G+ Sbjct: 807 TQLGDVATFTLAPGPNQISRENG-KRLVIVTANVRGRDIGSFVNEAQQRVQGIVKVPTGY 865 Query: 851 GFEWTGQSLEEKTSGNQAPALYALSLIAVFLVLAALYESTSIPLAVMLVVPLGILGALLG 910 W G + +++ ++ + LSL+ VFL+L A++ + L V VP + G + Sbjct: 866 WITWGGTFEQLQSATDRLKIVVPLSLLLVFLLLFAMFGNVKDGLLVFTGVPFALTGGIAA 925 Query: 911 VTLRAMPNDVYFKVGMIAVVGLSAKNAILIIEFAKDLQAQGMGLIEATLEAVHLRFRPII 970 + LR +P + VG IA+ G++ N +++I F + L+ +G L EA E R RP++ Sbjct: 926 LWLRDIPLSISAGVGFIALSGVAVLNGLVMISFIRSLREEGRSLDEAIHEGALTRLRPVL 985 Query: 971 MTSLAFILGVLPLAIASGAGSASQRAIGTGVMGGM 1005 MT+L LG +P+A+A G G+ QR + T V+GG+ Sbjct: 986 MTALVASLGFVPMALAMGTGAEVQRPLATVVIGGI 1020 Database: BlastDatabases/690/690 Posted date: Apr 9, 2011 4:48 AM Number of letters in database: 1,000,347 Number of sequences in database: 3295 Lambda K H 0.321 0.136 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3295 Number of Hits to DB: 1,954,324 Number of extensions: 82504 Number of successful extensions: 416 Number of sequences better than 1.0e-08: 10 Number of HSP's gapped: 339 Number of HSP's successfully gapped: 16 Length of query: 1048 Length of database: 1,000,347 Length adjustment: 91 Effective length of query: 957 Effective length of database: 700,502 Effective search space: 670380414 Effective search space used: 670380414 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 134 (56.2 bits)