BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0464.p
         (250 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094369|ref|YP_001099444.1| putative glycosyltransferase [H...    76   2e-15

>gi|134094369|ref|YP_001099444.1| putative glycosyltransferase
           [Herminiimonas arsenicoxydans]
          Length = 303

 Score = 75.9 bits (185), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 110/224 (49%), Gaps = 10/224 (4%)

Query: 7   PLVTVVVPSFNQGRFLEAALESIFRQDIDV-EVFVMDGGSTDNSVDIIRRWEH---RLTF 62
           P+VTVV+P++N   FL  AL+S+  Q     E  V++  S D+++ ++  +     RL  
Sbjct: 5   PVVTVVIPTYNHAHFLREALQSLCAQSFSNWEAIVVNNYSEDDTIAVVASFSDPRIRLEN 64

Query: 63  WRSAPDGGQAAAINEGMAMGKAPYVAWLNSDDWYLDGALKRLVCELQSNPHTPATYGRAW 122
           +R+  +G  A++ N G+A+ +  Y+A+L+SDD +    L + +     N      +G  W
Sbjct: 65  FRN--NGVIASSRNRGIALAQGQYIAFLDSDDIWYPEKLTQCMQSFDDNVDL-VCHGLYW 121

Query: 123 NVVEATGKRYPVWVEAFSERRLALRCIVSQPATLMRRSAWEVVGGV--DPSLHMAMDYDL 180
              E           A  +  L     ++  AT++R+S  ++V G   +P++  + DY L
Sbjct: 122 FGNEERNMFCGPAQRATFDALLDKGNCITPSATVVRKSILDLVDGFSQNPAVVTSEDYHL 181

Query: 181 WWRLFKTVGPLTFIDEFVAVNREHEDTKTRNFRSRHYKEAIAVV 224
           W +L K    + F++E +   R H   ++ +   RH +  + VV
Sbjct: 182 WLKLAKVGARMKFLEEILGGYRIHSSNQS-SAALRHLESVLQVV 224


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.323    0.137    0.449 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 538,573
Number of extensions: 21977
Number of successful extensions: 51
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 50
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 1,000,347
Length adjustment: 79
Effective length of query: 171
Effective length of database: 740,042
Effective search space: 126547182
Effective search space used: 126547182
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 127 (53.5 bits)