BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0313.p
         (410 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095967|ref|YP_001101042.1| cell division protein ATPase [H...   768   0.0  

>gi|134095967|ref|YP_001101042.1| cell division protein ATPase
           [Herminiimonas arsenicoxydans]
          Length = 410

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/410 (90%), Positives = 398/410 (97%)

Query: 1   MTKDAKNLIVGLDIGTSKVVAVVAEVLPDGRHEVIGLGQSESKGLKKGVVVNIEATVESI 60
           MTKDAKNLIVGLDIGTSKVVAVVAEV+P+GRHEVIGLGQ ES+GLKKGVVVNIEATVESI
Sbjct: 1   MTKDAKNLIVGLDIGTSKVVAVVAEVMPNGRHEVIGLGQHESRGLKKGVVVNIEATVESI 60

Query: 61  QRALEEAELMADCKIRNVYTGIAGSHIRSFNSSGMVAIKDKEVTAADVSRVIETAKAVNI 120
           QRALEEAELMADCKIRNVYTGIAG+HIRSFNSSGMVAIKDKEVTA DV+RVIETAKAVNI
Sbjct: 61  QRALEEAELMADCKIRNVYTGIAGNHIRSFNSSGMVAIKDKEVTATDVARVIETAKAVNI 120

Query: 121 PTDQQLLHTVPQEFIVDNQEDVREPIGMSGIRLEVKVHIVTGAVSAVQNIVKCVRRCGLE 180
           PTDQQLLHTVPQEFIVDNQEDVREPIGMSGIRLEVKVHIVTGAVSAVQNIVKC+RRCGLE
Sbjct: 121 PTDQQLLHTVPQEFIVDNQEDVREPIGMSGIRLEVKVHIVTGAVSAVQNIVKCIRRCGLE 180

Query: 181 VSDLILQPMASADSVLTTDERELGVVLVDIGGGTTDVAVFTEGAIRHTAVIPIAGDQITN 240
           VSDLILQPMASA++VLT DE+ELGVVL+DIGGGTTDVA+FTEGAIRHTAVIPIAGDQITN
Sbjct: 181 VSDLILQPMASAEAVLTPDEKELGVVLIDIGGGTTDVAIFTEGAIRHTAVIPIAGDQITN 240

Query: 241 DIAMALRTPTLEAEEIKLRYGVAKQILADPTETLEVPGLGDRNPRTLSRQALAAVIEPRV 300
           DIAMA+RTPT EAEEIKLRYG+AKQ+LADP ETLEVPGLGDR  R LSRQALAAVIEPR+
Sbjct: 241 DIAMAVRTPTAEAEEIKLRYGMAKQVLADPGETLEVPGLGDRGTRALSRQALAAVIEPRI 300

Query: 301 EELFALVHQVVRESGYEEVLSSGIVLTGGSAMMPGMTELAEDIFLKPARLGTPEYSGQLA 360
           EELF+LVHQVVRESGYEEVLSSGIVLTGG++MMPGM ELAEDIFLKPARLGTPEY+GQLA
Sbjct: 301 EELFSLVHQVVRESGYEEVLSSGIVLTGGTSMMPGMVELAEDIFLKPARLGTPEYNGQLA 360

Query: 361 DVVRSPRYSTVLGLLQEAKKQYLRGYIVTRQEGSVKAVWQRMKEWFLGNF 410
           DVVRSPRY+TVLGLL EAKKQYLRG+IVTRQ+GS  A+++RMKEWFLGNF
Sbjct: 361 DVVRSPRYATVLGLLLEAKKQYLRGHIVTRQDGSATAIFRRMKEWFLGNF 410


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.317    0.134    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 745,017
Number of extensions: 30460
Number of successful extensions: 120
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 121
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 1,000,347
Length adjustment: 84
Effective length of query: 326
Effective length of database: 723,567
Effective search space: 235882842
Effective search space used: 235882842
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 130 (54.7 bits)