BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0248.p
         (319 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094736|ref|YP_001099811.1| bifunctional enoyl-CoA hydratas...   325   2e-90

>gi|134094736|ref|YP_001099811.1| bifunctional enoyl-CoA
           hydratase/phosphate acetyltransferase [Herminiimonas
           arsenicoxydans]
          Length = 477

 Score =  325 bits (834), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 182/285 (63%), Positives = 222/285 (77%), Gaps = 1/285 (0%)

Query: 26  MRVAVVHPCSVEALQGALEARDEGLLEPLLVGPQAKIRHIAEQAGLSLQGLLIEDVEHSH 85
           + VAVVHPC   +L   L+AR+ GL+EP+LV P+AK+  +A QAGL++ G+ I DV HSH
Sbjct: 190 IHVAVVHPCDALSLAAVLDAREAGLIEPVLVAPRAKLEAVAAQAGLNISGIQIVDVAHSH 249

Query: 86  AAAARAVELAIQGQVGALMKGSLHSDELLGAVVGAGSGLRTERRISHVYAMAIPTYAKPL 145
           AAAA+AVE+A+Q +V ALMKGSLH+DEL+ AV+ A  GLRT+RRISH + M  P Y +P 
Sbjct: 250 AAAAQAVEMAVQKKVVALMKGSLHTDELMHAVI-AHPGLRTKRRISHCFLMQTPAYPRPF 308

Query: 146 IITDAAINIAPTLAHKRDICQNAIDLLHVMGVPRPHVAVLAAVETVNPAMPSTLDAAALT 205
           IITDAAINIAPTL  K DI +NAIDL HV+GV +P VA+LAAVETVN  M +TLDAAAL 
Sbjct: 309 IITDAAINIAPTLEEKADIVRNAIDLAHVIGVAQPRVAILAAVETVNTEMQATLDAAALC 368

Query: 206 VMATRHQITGAMVDGPLAFDNAISLQSAAIKDIQSPVAGSADILLVPDLEAGNMLAKQLI 265
            MA R QI G +VDGPLAFDNA+S  +A IK I S VAG AD+L+VPDLE+GNMLAKQL 
Sbjct: 369 KMADRGQIAGGIVDGPLAFDNAVSAAAAHIKGIVSEVAGRADVLVVPDLESGNMLAKQLE 428

Query: 266 YLAQAEAAGLVLGARVPVILTSRADSLRVRLASSALARLFASRSK 310
           YL  A +AG+VLGA+VP++LTSRADS   RLAS A+A L A+R K
Sbjct: 429 YLGGASSAGIVLGAKVPIVLTSRADSRESRLASCAIALLLANRYK 473


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.319    0.133    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 522,193
Number of extensions: 19539
Number of successful extensions: 69
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 68
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 1,000,347
Length adjustment: 82
Effective length of query: 237
Effective length of database: 730,157
Effective search space: 173047209
Effective search space used: 173047209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 129 (54.3 bits)