BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0217.p
         (391 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134093830|ref|YP_001098905.1| acetyl-CoA acetyltransferase [H...   641   0.0  
gi|134095996|ref|YP_001101071.1| acetyl-CoA acetyltransferase [H...   250   8e-68

>gi|134093830|ref|YP_001098905.1| acetyl-CoA acetyltransferase
           [Herminiimonas arsenicoxydans]
          Length = 391

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/391 (78%), Positives = 351/391 (89%)

Query: 1   MDDVVIVAAQRTAIGKFGGSLSKIAAADLGAQVIKALLAKTGIKPEAISEVILGQVLTAG 60
           M+++VIVAA RTA+GKFGG+L+KI AADLGA +I+ LL +TGI  +AISEVILGQVLTAG
Sbjct: 1   MEEIVIVAAGRTAVGKFGGALAKIPAADLGAHIIRNLLLRTGIAADAISEVILGQVLTAG 60

Query: 61  LGQNPARQSVIKSGLPDMVPAFVVGKVCGSGLKAVQLAAQAIRCGDAQIVIAGGQENMSA 120
            GQNPARQ+ I+ GLPDMVPAF + KVCGSGLKA  LAAQAI+CGDA I+IAGGQENMSA
Sbjct: 61  CGQNPARQASIRGGLPDMVPAFTINKVCGSGLKATHLAAQAIQCGDAHIIIAGGQENMSA 120

Query: 121 SPHVLNNSRDGFRMGDAKLTDTMIVDGLWDVYNQYHMGITAENVAKKFEISREEQDAFAA 180
           SPHVL NSR+G RMGD KL DTMI+DGLWDVYNQYHMG TAEN+AKKF ISR+EQD FA 
Sbjct: 121 SPHVLQNSREGIRMGDGKLVDTMIIDGLWDVYNQYHMGTTAENIAKKFGISRQEQDEFAL 180

Query: 181 ASQNKAEAAQKAGRFKDEIVPIEIKGKKETVVFDTDEFVKHGVTAEALAALRPAFDKAGT 240
           ASQ+KAEAAQ AG+FKDEI+P+EI GKK  V+ D+DE++K G T E+LAALRPAF K GT
Sbjct: 181 ASQHKAEAAQNAGKFKDEIIPLEIPGKKGAVIVDSDEYIKPGTTLESLAALRPAFSKDGT 240

Query: 241 VTAGNASGINDGAAAVVVTSAKLAAELGLPVLAKIKAYSSAGLDPSIMGMGPVPASQLTL 300
           VTAGNASGINDGAAAV++ +AK AAELGL  LA+IKAYSSAG+DP+IMGMGPVPA+QL L
Sbjct: 241 VTAGNASGINDGAAAVIMMTAKKAAELGLKPLARIKAYSSAGVDPAIMGMGPVPAAQLCL 300

Query: 301 KKAGWTPQDLDLMEINEAFAAQAIAVNKQMGWDTSKINVNGGAIALGHPIGASGCRVLVT 360
           KKAGW+ QD+DLMEINEAFAAQAIAVN++MGWDT KINVNGGAIA+GHPIGASGCR+LVT
Sbjct: 301 KKAGWSHQDIDLMEINEAFAAQAIAVNREMGWDTGKINVNGGAIAIGHPIGASGCRILVT 360

Query: 361 LLHEMVRRDAKKGLASLCIGGGMGVALAVER 391
           LLHEM+RRDA++GLASLCIGGGMGVALA+ER
Sbjct: 361 LLHEMMRRDARRGLASLCIGGGMGVALAIER 391


>gi|134095996|ref|YP_001101071.1| acetyl-CoA acetyltransferase
           [Herminiimonas arsenicoxydans]
          Length = 398

 Score =  250 bits (639), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 155/404 (38%), Positives = 230/404 (56%), Gaps = 24/404 (5%)

Query: 1   MDDVVIVAAQRTAIGKFG-GSLSKIAAADLGAQVIKALLAKT-GIKPEAISEVILG-QVL 57
           + D  IVAA RT IGK   G        DL  +V++++L++   + P  I + I+G    
Sbjct: 5   LQDAYIVAATRTPIGKAPRGMFRNTRPDDLLVRVLQSVLSQVPDLDPNLIEDAIIGCSFP 64

Query: 58  TAGLGQNPARQSVIKSGLPDMVPAFVVGKVCGSGLKAVQLAAQAIRCGDAQIVIAGGQEN 117
            A  G N AR  V+ +GLP  V    V + C SGL A+ +AA  IR G+A ++IAGG E+
Sbjct: 65  EAEQGLNMARMGVLLAGLPKTVGGVTVNRYCASGLTAIAMAADRIRVGEADVMIAGGAES 124

Query: 118 MSASPHVLNNSRDGFRMGDAKLTDTMIVDGLWDVYNQYHMGITAENVAKKFEISREEQDA 177
           MS  P  +        MG  K  +         +   Y MG+TAE VA+++++SRE QD 
Sbjct: 125 MSMVP--MMGHHPAMNMGIFKDEN---------IGMAYGMGLTAERVAEQWKVSREAQDQ 173

Query: 178 FAAASQNKAEAAQKAGRFKDEIVPIEIKGKKE----------TVVFDTDEFVKHGVTAEA 227
           FA  S  KA AAQ++G F +E+  ++I  +            T + + DE  +   + EA
Sbjct: 174 FALNSHLKALAAQQSGEFNNEMTSVDIVERFPNLSSGEIDITTRMVNMDEGARADTSLEA 233

Query: 228 LAALRPAFDKAGTVTAGNASGINDGAAAVVVTSAKLAAELGLPVLAKIKAYSSAGLDPSI 287
           LA LRP F   G+VTAGN+S  +DGA A+++ S K+  +  L  LA+  +++  G+ P I
Sbjct: 234 LAKLRPVFAPKGSVTAGNSSQTSDGAGALILVSEKILRQFNLTPLARFVSFAVRGVPPEI 293

Query: 288 MGMGPVPASQLTLKKAGWTPQDLDLMEINEAFAAQAIAVNKQMGWDTSKINVNGGAIALG 347
           MG+GP  A    L+ AG     +D +E+NEAFAAQA+AV + +G D +++N  GGAIALG
Sbjct: 294 MGIGPKEAIPAALRAAGLKQDQMDWIELNEAFAAQALAVIQDLGLDPARVNPVGGAIALG 353

Query: 348 HPIGASGCRVLVTLLHEMVRRDAKKGLASLCIGGGMGVALAVER 391
           HP+GA+G     T++H + R++ K G+ ++C+G GMG A   ER
Sbjct: 354 HPLGATGAIRSATVVHALRRKNMKYGMVTMCVGTGMGAAGIFER 397


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.316    0.132    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 700,312
Number of extensions: 27573
Number of successful extensions: 115
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 112
Number of HSP's successfully gapped: 2
Length of query: 391
Length of database: 1,000,347
Length adjustment: 84
Effective length of query: 307
Effective length of database: 723,567
Effective search space: 222135069
Effective search space used: 222135069
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 130 (54.7 bits)