BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0172.p
         (137 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096130|ref|YP_001101205.1| thiosulfate sulfurtransferase [...   170   2e-44
gi|134095876|ref|YP_001100951.1| putative thiosulfate sulfurtran...    55   1e-09

>gi|134096130|ref|YP_001101205.1| thiosulfate sulfurtransferase
           [Herminiimonas arsenicoxydans]
          Length = 133

 Score =  170 bits (431), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 81/132 (61%), Positives = 102/132 (77%)

Query: 1   VKFIIDNIFLIALALVSGGALLVPYLQQRGNKLSLLQATQMLNQGKVLVLDVRDSEQFAA 60
           +KFIIDNIFLI + LVSGGAL+V  LQ+ G K++ LQATQ++NQGKVL+LDVR++  FA 
Sbjct: 1   MKFIIDNIFLIGIVLVSGGALIVHTLQRTGAKVTALQATQIINQGKVLILDVRNAADFAL 60

Query: 61  GHLRDARNIPLKELPQRIGELDKLKGRPVIVVCQTGTQASRAESSLKKAGFTEVYGLHGG 120
           GH+RDA+NIPLKEL  R+ EL+K K RPVIVVC  G Q+ +A + LKKAG+     L GG
Sbjct: 61  GHIRDAKNIPLKELKTRVSELEKFKERPVIVVCTKGLQSVKATAQLKKAGYANAASLLGG 120

Query: 121 IAAWQGQGLPLT 132
           + AWQ QGLP+ 
Sbjct: 121 LDAWQSQGLPVV 132


>gi|134095876|ref|YP_001100951.1| putative thiosulfate
           sulfurtransferase [Herminiimonas arsenicoxydans]
          Length = 107

 Score = 55.5 bits (132), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 48  LVLDVRDSEQFAAGHLRDARNIPLKELPQRIGELDKLKGRPVIVVCQTGTQASRAESSLK 107
           ++LDVR+  ++    +  A +IP+  +P ++ +LDK     ++ +C  G ++ R    L+
Sbjct: 22  ILLDVREPWEYQTCRIEGAISIPMNTIPDQLAQLDKDAA--IVCICHHGARSMRVAHFLE 79

Query: 108 KAGFTEVYGLHGGIAAWQGQGLP 130
             G+T V  L GGI AW  Q  P
Sbjct: 80  SQGYTHVTNLTGGIHAWAQQVDP 102


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.319    0.137    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 222,633
Number of extensions: 7868
Number of successful extensions: 32
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 32
Number of HSP's successfully gapped: 2
Length of query: 137
Length of database: 1,000,347
Length adjustment: 73
Effective length of query: 64
Effective length of database: 759,812
Effective search space: 48627968
Effective search space used: 48627968
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 124 (52.4 bits)