BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0099.p
         (432 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134093434|ref|YP_001098509.1| glutathione synthetase [Hermini...   740   0.0  

>gi|134093434|ref|YP_001098509.1| glutathione synthetase
           [Herminiimonas arsenicoxydans]
          Length = 432

 Score =  740 bits (1910), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/432 (82%), Positives = 397/432 (91%)

Query: 1   MVPHLVTALNGPLLELEKKILGATPAIERWFRMEWQEHTPPFYCSVDLRNAGFKLAPVDT 60
           MVPHLVTALNGPLL+LEKKIL ATPAIERWFR+EWQEHTPPFYCSVDLRNAGFKLAPVDT
Sbjct: 1   MVPHLVTALNGPLLDLEKKILTATPAIERWFRLEWQEHTPPFYCSVDLRNAGFKLAPVDT 60

Query: 61  NLFPGGFNNLSPEMLPLAVQAAMAAIEKYCPDARNLLLIPENQPGNTFYLQNIGRLMQIF 120
           NLFPGGFNNLSPEMLPLAVQAAMAAIEKYCPDA+NLLLIPE    NTFYLQNI RL+QIF
Sbjct: 61  NLFPGGFNNLSPEMLPLAVQAAMAAIEKYCPDAKNLLLIPEAHTRNTFYLQNIARLIQIF 120

Query: 121 RQTGLNVRLGTLAPGATKPQQIELPDGTHITLEPLERSANGRRLGLKNFDPCTVLLNNDL 180
           RQTGLNVRLG+L+P  T P  IELPDGT +TLEPLERS NGRRLGLKNFDPCT+LLNNDL
Sbjct: 121 RQTGLNVRLGSLSPDITAPTPIELPDGTTLTLEPLERSHNGRRLGLKNFDPCTILLNNDL 180

Query: 181 SSGVPSVLEGLYEQSVLPPLHAGWALRRKSNHFAAYDEVVKKFSKMVEVDPWMLNPLFTK 240
           SSG+P++LE L+EQ++LPPLHAGWA+RRK+NHFAAYDEVVKKF+KM++VDPWMLNP F K
Sbjct: 181 SSGLPAILENLHEQNLLPPLHAGWAVRRKTNHFAAYDEVVKKFAKMIDVDPWMLNPYFMK 240

Query: 241 VSNIDFQDNTGTDALADSVSSLLSKIRKKYKEYGIKEQPFVFIKANAGTYGMGIMTVKDA 300
             N++F +NTG D LA +V +LL+K+RKKYKEYGIKE+PFV +KA+AGTYGMGIMTV DA
Sbjct: 241 CDNVNFNENTGEDCLASNVDTLLAKMRKKYKEYGIKEKPFVIVKADAGTYGMGIMTVHDA 300

Query: 301 SEIKDLNRKQRSGMLAGKEGLEVSEVIVQEGVHSFERINQAVAEPVVYMIDRYVVGGFYR 360
           SE+KDLNRKQR+ M   K+GLEV++VI+QEGV +FE IN++VAEPVVYMIDRYVVGGFYR
Sbjct: 301 SEVKDLNRKQRNKMAVIKDGLEVTDVIIQEGVPTFEHINESVAEPVVYMIDRYVVGGFYR 360

Query: 361 VHADRGVNENLNAPGAHFVPLAFAQQHALPDMHAKPGTAAPNRFYMYGVVARLALLAASV 420
           VHADRG +ENLNAPGAHFVPLAFA QHALPD  AKPGTAAPNRFY+YGVVARLALLAAS+
Sbjct: 361 VHADRGNDENLNAPGAHFVPLAFAHQHALPDYQAKPGTAAPNRFYIYGVVARLALLAASL 420

Query: 421 EMEKTDPNPEVY 432
           EMEKTDPNPEVY
Sbjct: 421 EMEKTDPNPEVY 432


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.319    0.136    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 839,968
Number of extensions: 34330
Number of successful extensions: 92
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 92
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 1,000,347
Length adjustment: 84
Effective length of query: 348
Effective length of database: 723,567
Effective search space: 251801316
Effective search space used: 251801316
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 130 (54.7 bits)