BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0073.p
         (633 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096460|ref|YP_001101535.1| Kup family low affinity potassi...   648   0.0  

>gi|134096460|ref|YP_001101535.1| Kup family low affinity potassium
           transporter [Herminiimonas arsenicoxydans]
          Length = 661

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/621 (50%), Positives = 442/621 (71%), Gaps = 1/621 (0%)

Query: 13  RSRKFHMITLAALGVVFGDIGTSPLYALKECFSPDHGIAFSPGAVLGIISMLFWAITIVV 72
           +      +TLAA+G+V+GDIGTSPLY +KE FS +HG+  +P  +LG++S++ W + I+V
Sbjct: 42  KKSSLAALTLAAVGIVYGDIGTSPLYTMKEVFSKEHGLDLTPENLLGVVSLIVWGLIIIV 101

Query: 73  TIKYVMFVLRADNNGEGGVLALMALSLRSAVSGSPRAKLLLMLGVFGACMFYGDVVITPA 132
           ++KYV  VLRA+N GEGG++ALMAL+L S    S     L+++G+FGA +FYGD VITPA
Sbjct: 102 SLKYVTLVLRANNRGEGGIMALMALALSSVTKNSRWYFPLMVMGLFGATLFYGDSVITPA 161

Query: 133 ISVLSAVEGLEIAAPSTAHVVIPLTLVIVVVLFLIQRHGTSVVGRFFGPVMFLWFFSLAL 192
           ISVLSAVEGL +A  +    V+P+T+ I+V L+ +Q  GT+ +G++FGPVM +WF +LA+
Sbjct: 162 ISVLSAVEGLGVATSAFDPYVVPVTVAILVGLYSLQARGTAGIGKWFGPVMLIWFITLAV 221

Query: 193 LGLYNIVKAPEVLVAINPYYAVHFMAEHSLQAFIVLGSVVLVLTGAEALYADMGHFGIKP 252
           +G+ NI+ AP +L A+NP++A+HF++ +   AFI LG+VVL  TGAEALYADMGHFG KP
Sbjct: 222 MGVVNIIDAPYILHALNPWHALHFLSGNGFLAFIALGAVVLAFTGAEALYADMGHFGAKP 281

Query: 253 IRYAWLFTVMPSLLINYFGQGANLIANPKAIANPFYLMIPEPLVLPMVLLATCATVIASQ 312
           IR AW     P+L +NY GQGA L+ NP+A+ NPFY  +    + P+V L+T A +IASQ
Sbjct: 282 IRMAWFLIAFPALSLNYLGQGALLLLNPEAVTNPFYQQLGAWSIYPLVALSTMAAIIASQ 341

Query: 313 AVISGAFSLTSQAILLGFVPRMRILHTSEDEQGQIYIPLINWMLLVLVVAVVLAFKKSDN 372
           A ISG FS+T QAI LGF+PRM+I  TS  + GQIYIP +NW+ +++VV  V+ F  S N
Sbjct: 342 ATISGTFSMTKQAIALGFLPRMKIEFTSASQIGQIYIPAVNWLQMIVVVLAVIGFGSSSN 401

Query: 373 LAAAYGVAVTTTMVITTMLLGVVMRHIWKWRNSALVVTITFLLVVDLAFFAANLLKLTEG 432
           LAAAYG+AVT TM++TT+L   V+R+ WK+     V    F LV+DL+ F+AN+LKL  G
Sbjct: 402 LAAAYGIAVTATMMVTTVLTFFVIRYRWKYNLILCVAATGFFLVIDLSLFSANMLKLFHG 461

Query: 433 GWFPLVIGGAAFFLLMTWYSGRMLLRMRIKDDGIPIEPFIEGLLAHPPHRVGGTAVFMTG 492
           GWFPL++G   F L++TW  GR L+   ++   IP+E F+  L   PP RV GTA+F+ G
Sbjct: 462 GWFPLLLGVVLFTLMLTWKRGRELVFENLQKHAIPLEDFLASLFISPPTRVPGTAIFLRG 521

Query: 493 NIATVPVALLHNLKHNRILHERVFFLKISIWDVPYVADSERLTMKDLGGDIYLLRAAFGF 552
               VP A+LHNL HN++LHERV FL + + +VPYV  ++++ ++ LG D Y +   +GF
Sbjct: 522 ESDGVPHAMLHNLSHNKVLHERVVFLTVRMMEVPYVPKADQVRIEHLGDDCYQMNVTYGF 581

Query: 553 KEAPEVQKVMTLTEQQFGHHFDLMDTSFFLARDTVVPSKLLGMSLWRERIFAWMYQNGAK 612
           K  P++   + L ++Q G  F++M+TSFF+AR TVV + + GM+LWRE IF  M ++   
Sbjct: 582 KNVPDIPAALDLAKEQ-GLEFEMMETSFFIARQTVVANPVRGMALWREHIFVAMSRHARG 640

Query: 613 PSDFFHIPANRVVELGTKVEI 633
            +D++ IP+NRV+ELGTKVEI
Sbjct: 641 AADYYQIPSNRVIELGTKVEI 661


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.328    0.142    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 1,145,825
Number of extensions: 46557
Number of successful extensions: 168
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 167
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1,000,347
Length adjustment: 87
Effective length of query: 546
Effective length of database: 713,682
Effective search space: 389670372
Effective search space used: 389670372
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 132 (55.5 bits)