BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4644.p
         (412 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300314035|ref|YP_003778127.1| transmembrane patatin-like phos...   744   0.0  
gi|300312580|ref|YP_003776672.1| FabD/lysophospholipase-like est...    84   2e-17

>gi|300314035|ref|YP_003778127.1| transmembrane patatin-like
           phospholipase [Herbaspirillum seropedicae SmR1]
          Length = 395

 Score =  744 bits (1920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/406 (89%), Positives = 379/406 (93%), Gaps = 14/406 (3%)

Query: 1   MRKEPEQLPPTNGPAAPVRKARAGKRSAAAPET--KPRVALVLQGGGALGAYQAGVYQAL 58
           MRK PEQ PP+            G+R AAA     KPRVALVLQGGGALGAYQAGVYQAL
Sbjct: 1   MRKAPEQTPPS------------GRRKAAAAPVAEKPRVALVLQGGGALGAYQAGVYQAL 48

Query: 59  HEHDFTPDWVVGTSIGAINAALIAGNPRETRIERLREFWETVAHPDLFDLRQVPDTLRPW 118
           HEHDFTPDWVVGTSIGAINAALIAGNPRETRIERLREFWETVAHPDL DLR VPDTLRPW
Sbjct: 49  HEHDFTPDWVVGTSIGAINAALIAGNPRETRIERLREFWETVAHPDLLDLRTVPDTLRPW 108

Query: 119 ATRLTTLDTFLRGTPGFFRPRPLNAFTLGLPVPPEEASFYSTAELGQTLSRLVDFDYLNG 178
           ATRLTT+DTFLRGTPGFFRPRPLNAF LGLPVPPEEASFYSTAEL QTLSRLVDFDYLNG
Sbjct: 109 ATRLTTMDTFLRGTPGFFRPRPLNAFALGLPVPPEEASFYSTAELEQTLSRLVDFDYLNG 168

Query: 179 QSGIRMTVAAVKVSCGSLVNFDTRERVLGPEHVMASGALPPGFAPVRVDGELYWDGGLYS 238
           QSGIRMTV+AVKVSCG+LVNFD+RE+ LGP+HV+ASGALPPGFAPVRV+GELYWDGGLYS
Sbjct: 169 QSGIRMTVSAVKVSCGTLVNFDSREQALGPQHVLASGALPPGFAPVRVEGELYWDGGLYS 228

Query: 239 NTPLEAVLNDEPRTNLVCLMVDLWHADGPEPRTLEEVVTREKDVTFASRSQRHIDAYLQQ 298
           NTPLEAVLND PRTNLVCLMVDLWHADGPEPRTLEEVVTREKDVTFASRSQRHIDAYLQQ
Sbjct: 229 NTPLEAVLNDTPRTNLVCLMVDLWHADGPEPRTLEEVVTREKDVTFASRSQRHIDAYLQQ 288

Query: 299 YRLRRAAHDLYQRLPPELLTQEDRQMMAELNADTTIHIVRLAYAGRDWNMASKDVNFARG 358
           YRLRRAAHDLYQRLP ELLTQ+DRQMMAEL+ADTTIHIVRLAYAGRDWNMASKDVNFARG
Sbjct: 289 YRLRRAAHDLYQRLPRELLTQQDRQMMAELDADTTIHIVRLAYAGRDWNMASKDVNFARG 348

Query: 359 SVQWRWEQGYQDALRGIALSQEDSFGQSEAGIVVHDLPSGQTHISA 404
           SV+WRWEQGYQDALRGIALSQEDSFGQSEAGIVVHDLPSGQTH++A
Sbjct: 349 SVRWRWEQGYQDALRGIALSQEDSFGQSEAGIVVHDLPSGQTHVAA 394


>gi|300312580|ref|YP_003776672.1| FabD/lysophospholipase-like
           esterase [Herbaspirillum seropedicae SmR1]
          Length = 338

 Score = 84.0 bits (206), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 119/260 (45%), Gaps = 32/260 (12%)

Query: 37  VALVLQGGGALGAYQAGVYQALHEHD-FTPDWVVGTSIGAINAALIAG----NPRETRIE 91
           ++L LQGGG+ GA+  GV   L E      + + G S GA+NA ++A     + RE    
Sbjct: 6   ISLALQGGGSHGAFTWGVLDRLLEDGRLGFEGISGASAGAMNAVVLAQGYVQDGREGARA 65

Query: 92  RLREFW---ETVAHPDLFDLRQVPDTLRPWATRLTTLDTFLRGTPGFFRPRPLNAFTLGL 148
            L  FW    T A  D  +    P    P  T +  +   L  T  FF P  LN     L
Sbjct: 66  ALERFWTALSTGAPLDYINAEGAPVIANP--TPMPGMQALLAMTR-FFSPTQLNP----L 118

Query: 149 PVPPEEASFYSTAELGQTLSRLVDFDYLNGQSGIRMTVAAVKVSCGSLVNFDTRERVLGP 208
            + P          L   L   VDFD L  Q  +++ +AA +VS G+L  F  R   L  
Sbjct: 119 DINP----------LRDILLEQVDFDRLRRQRELKLFIAATQVSTGTLKIF--RNADLSV 166

Query: 209 EHVMASGALPPGFAPVRVDGELYWDGGLYSNTPLEAVLNDEPRTNLVCLMVDLWHAD--G 266
           E ++AS  LP    P+ ++GE YWDGGL +N P+  +L+     +   +MV L H     
Sbjct: 167 EALLASACLPSLHRPIEIEGEAYWDGGLTANPPIFPLLHACAARD---VMVVLLHPSRRA 223

Query: 267 PEPRTLEEVVTREKDVTFAS 286
             P +  ++  R  +++F+S
Sbjct: 224 GTPTSTHDIGQRLSEISFSS 243


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.134    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,246,009
Number of extensions: 50805
Number of successful extensions: 150
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 148
Number of HSP's successfully gapped: 2
Length of query: 412
Length of database: 1,619,870
Length adjustment: 88
Effective length of query: 324
Effective length of database: 1,203,190
Effective search space: 389833560
Effective search space used: 389833560
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 132 (55.5 bits)