BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4577.p (2948 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300312548|ref|YP_003776640.1| filamentous hemagglutinin outer... 717 0.0 gi|300310626|ref|YP_003774718.1| filamentous hemagglutinin prote... 543 e-155 >gi|300312548|ref|YP_003776640.1| filamentous hemagglutinin outer membrane protein [Herbaspirillum seropedicae SmR1] Length = 2685 Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust. Identities = 524/1318 (39%), Positives = 743/1318 (56%), Gaps = 132/1318 (10%) Query: 1388 GTAQRTFVKSHSFKADDRRYESAPYASQTIETQFQLEVTPTHGTGST-----RDAISRAA 1442 GT Q V R + +A A+ + + ++T T G+G + DA +R Sbjct: 962 GTTQGAIVGKQGVNIMARNFSNADIAAGS-AANIRSDLTLTTGSGQSVGSVLNDASARPG 1020 Query: 1443 ITAPTQPLPATGRTNDLRAPAVDVSLPINALYQVNNSSPTAPLVQTDARFIGNRNWLSSD 1502 TAP P+P R N + PA + L++T +F R WLSSD Sbjct: 1021 ATAPDAPVPV--RPNPMFVPATSGNY----------------LLETRTQFTDRRTWLSSD 1062 Query: 1503 FLIQRIREQSGPAPQVQRFADGFYEQQLIQRQIQEATGQRYLKGFNSNEAQYLALMQAGL 1562 +L+ + P+ +R DGFYEQ++++ Q+ + TG R FN +++QY L+ + Sbjct: 1063 YLLTALNVD--PSTTQKRLGDGFYEQRMVREQMAQLTG-RPSGSFN-DDSQYQKLLNNAV 1118 Query: 1563 QQAQAQRYALGIALSEAQIAQLKTDIVWLVKQTVTLADGRTQEVLVPQVYL-HPSNIQVS 1621 AQ+ G+AL+ Q++ L +DIVWL Q V L DGRT+EVLVP++YL H + Sbjct: 1119 SVAQSWNLRPGVALTPDQVSHLTSDIVWLETQKVVLPDGRTEEVLVPKLYLAHIDKDALK 1178 Query: 1622 GQQTLIAGNDLALQTAQDILNRGGTIAARSGVSLRADNLRNLGGRIVGGNVDIAAASDID 1681 L++G+++ +Q A++I N+GG I R+ + GR V + A++DI Sbjct: 1179 NSGALVSGDNITIQ-AENISNKGGFIDGRASGT----------GRTV-----LVASNDIA 1222 Query: 1682 NAGGSIDADQQLILRAGRDI---ALTSTSVDTANATTVGRNI---NQVASVSGKDVVIAA 1735 N GG I D+ +++ AGR++ LT+T N T G NQ + + K++ I A Sbjct: 1223 NLGGGISGDE-IVISAGRNVRNETLTTTQTYN-NGQTSGSYTSLSNQGSIAADKNLTITA 1280 Query: 1736 GRDFTANAAVIA-------ARGDVSILAARDVNFGAVTEYFRQEIRWANDRGGSNWVRTL 1788 G D T A +A A G +S+ A RD+N G V + ++ G + V ++ Sbjct: 1281 GADITNLGATVASGRSGDAATGKLSMSAGRDINLGTVKTGSTYDANFSGYFGHAQSVSSV 1340 Query: 1789 -----TGPNL--------------VDRGNGAYGTTEVGVNRAVVTGS------------- 1816 G +L V G G + RAV G+ Sbjct: 1341 GSTVNAGGDLTMVAQRDLSLTAAQVAIGTNGSGNGSLMAGRAVTIGAALDRAESTIGRAA 1400 Query: 1817 -------QEVATQVSGSNI------RIQAG----QDVITQGTQIVADGALQAQAGRDIQI 1859 + + V GSNI I+AG DV + I A AL+ A DI + Sbjct: 1401 SRSYSRADDESVAVRGSNIDAAGGISIKAGLMEKADVKVAASSITAGKALEVAATGDINV 1460 Query: 1860 GTANASGSARDQVQRSSGGILSAKTVRTDDASSFSRQMGSTLSGNAVLVRAGQDVKVTGS 1919 + + S + + +S G+LS+ T + +++ +GSTLSG+ +++AG+D+ + GS Sbjct: 1461 VSEESFQSHSEYAKSTSRGLLSSTTRTSYGKRAYTNAVGSTLSGDTTVLQAGKDMSIVGS 1520 Query: 1920 DVVSTQGTAVVAGRDVNIASAIDS-STRRSFRQERASGVMGAGLGVTVGSRVQSRDVDGH 1978 +VVS+ GT++VA ++ +ASA D + ++ + + G GLG T+G+R Sbjct: 1521 NVVSSAGTSLVAANNITVASASDKVESAEGSNKKSSGLLSGGGLGFTIGTRELDNKNTTV 1580 Query: 1979 AQTAAASTVGSVEGNVTIVAGNRYTQVGSDVLAPKGDIDIAARSVEIRAAEQASRTETED 2038 TA +S VGS++GNV+I AGN YTQ GS+VLAPKGDID+ A+ + I AA + R+ + Sbjct: 1581 NSTAVSSNVGSIDGNVSIKAGNAYTQSGSNVLAPKGDIDVVAKQISILAAAETERSTQDM 1640 Query: 2039 KFKQSGLTVAVTSPVLSAIQTVGQMAEAASKTKDRRMQALAGATAGLSVSNAIDAVIAGQ 2098 FKQSGLT+ +TSPVLSAIQT QMA+AA T RMQ LA A G + NA+DAV GQ Sbjct: 1641 VFKQSGLTIQITSPVLSAIQTAQQMAQAAKSTSGGRMQLLAAANIGFAGKNAVDAVRTGQ 1700 Query: 2099 GQTIDGKAN-QIVTGPADP-------VTGKAPTRDANAAEKVGGINLAFSLGASSSQSRS 2150 G +DGK N Q+ T D K TRDA AA+K GGINLA S+GAS S++ S Sbjct: 1701 GFAVDGKDNPQVRTNALDENGDLKLGADKKPETRDATAADKAGGINLAISVGASKSENHS 1760 Query: 2151 EQTSNTVRGSTVSAGGSVNISAQGGGADSNIVIQGSDIKAGVNATLKAANEVRLISAQET 2210 + +++T RGST++AGG+++++AQGGGADSN+++QGSDI++G N LKA NEVRL++AQ T Sbjct: 1761 QSSASTARGSTLNAGGNISLTAQGGGADSNVIVQGSDIRSGANTLLKADNEVRLLAAQST 1820 Query: 2211 SEQHSRNSGASGSVGVSIGTDGLLFTASASGSRGKGEGAEVTQVNTHVDAGNKPTIVSGT 2270 +EQ S N SGSVG+SIGTDG L A SGSRG+G+G++V QVNTHVDAGNK TI SGT Sbjct: 1821 TEQSSSNKAMSGSVGISIGTDGFLVNAGLSGSRGRGDGSDVAQVNTHVDAGNKLTIASGT 1880 Query: 2271 DTTISGAVVRGKQVEMEVGTSGKGNLNIASQQDSSTFQSRQQSLGGSVSVGTGKMGGSVN 2330 DTTI GAV GKQV ++VGTSG GNLNI S QD+ST++SRQQS G S+S G G+M GS+N Sbjct: 1881 DTTIKGAVASGKQVVIDVGTSGSGNLNIESLQDTSTYKSRQQSAGVSISAGMGRMSGSLN 1940 Query: 2331 YSQSNINSNYASVMEQSGIKAGDGGFQINVRGNTDLKGAVIASSDKAVAANKNSLTTQTL 2390 ++S+++ NYASV EQSGIKAGD GFQINV GNTDLKGA IAS+DKA A KNSLTT+TL Sbjct: 1941 LARSSVDGNYASVNEQSGIKAGDDGFQINVAGNTDLKGAKIASTDKAAADGKNSLTTETL 2000 Query: 2391 TQSDIQNIAQYDAQSVGIGVGYN-TGKDGGLSATPPMVVGANGSASSTTRSAISGGVITI 2449 TQSDI+N + + A+S +G+G N G GL+ + +GS SSTTRS IS I I Sbjct: 2001 TQSDIKNRSDFKAESQSVGMGTNLAGSVLGLAGSALGRGNVSGSDSSTTRSGISQADIKI 2060 Query: 2450 TDDKKQQELTGKTAEQAIASVNREVSSSKEGSNALKPIFNKEEIENKTAIAGAFTRELGS 2509 TDD QQ TGKTAEQ IAS+N +VSS ++ S + +N +E++ TR G Sbjct: 2061 TDDAAQQAKTGKTAEQTIASINADVSSERDTSGKIAKTWNGQELQADVEAQAEITRAFGQ 2120 Query: 2510 FLNNRAKEADEARRKLDDAIAEERGNPVEQRDETRLRRLTEQYLDAEKWSSAGTYRQYAT 2569 + A E++ K + + N + D+T+ L + A++W G ++ Sbjct: 2121 QVAQLAGAYAESKEK---ELRQAASNAAQNGDQTQALLLGAE---ADQWKDGGENKRALK 2174 Query: 2570 AIVGAVTGNLNA-STSQFIQAAAVNYLQGLGAEQVKRIADSL--ESEPARVALQGVLG 2624 AI V G L S Q + A+ YL A+ + R E++ A+V +LG Sbjct: 2175 AITTLVIGGLGGQSAGQLLANASAPYL----ADAIGRYFSQPGNENKSAQVLSHAILG 2228 Score = 317 bits (811), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 231/597 (38%), Positives = 329/597 (55%), Gaps = 75/597 (12%) Query: 14 HAQILIDRNAPPTQQASVLSSGNGVPVVNIQQPNARGLSVNRYRRFDVDARGVILNNAGS 73 +AQI+ D NAP QQ V+++ NG+P VNIQ P+A G+S N Y +FDV+ G ILNN+ S Sbjct: 71 YAQIIADPNAPRAQQPVVVNTANGIPQVNIQTPSAAGVSRNTYSQFDVNRAGAILNNSRS 130 Query: 74 ASKTGLAGYVAGNPRLAGGGARVIVNQINATDPSYLRGFIEVAGHQAQVIIANPAGITCA 133 +T L G+V NP LA G ARVI+N++N+++PS LRGF+EVAG +AQVIIANP+G+TC Sbjct: 131 DVQTQLGGWVQRNPNLANGTARVILNEVNSSNPSMLRGFVEVAGDRAQVIIANPSGVTCD 190 Query: 134 GCGFINAPRVTLTTGTPIIHQGSLESYRVGGGVLSIEGDGMQAGSADYADLIARAVRINA 193 GCGFINA R TLTTGTPII+ GSL+ Y V GGV+SI+G+G+ + + DLIARA +INA Sbjct: 191 GCGFINASRSTLTTGTPIINNGSLDGYLVRGGVVSIKGNGLNDSQSSFTDLIARAAKINA 250 Query: 194 GLWANRVKVSTGLNAVSADHEQVVPGVAPLDATPLRAIDVAHLGGMYAGHIYLMATEQGV 253 G+W+ +KV+ G N V+AD+ V V+ A P IDVA LGGMYA I L+ TE GV Sbjct: 251 GIWSKELKVTVGTNQVNADNTTVT-AVSADPAKPQFGIDVAQLGGMYANKIVLVGTESGV 309 Query: 254 GAHN-GGKLVADTELIVTAAGRLENTGTLAARGH------------------------TR 288 G N G A EL +TAAGR+EN+G+LAA + Sbjct: 310 GVRNAGAIGAAAGELTLTAAGRIENSGSLAATASLGVRATGQGGDIVNSGSVASSAAAVK 369 Query: 289 LEVAGALGNSGSIGGTTGLTVNAAALDNSGDLLTPAA-LEIGLKQGLINGGRIGSNALLT 347 L+ G + NS +I +G+T+ AA+L NSG + +E+ + N G+ Sbjct: 370 LQADGGINNSNTISAQSGVTLTAASLQNSGAISAATGNVEVDTHGAVNNSGK-------- 421 Query: 348 VQAATLENRQDLYSSRSSVQLKIGERLVNRGNIEA--RQTVTANATALDNQGRFISEDAL 405 VQAA D+ S + Q + N GNIEA + +TA+ L N G ++ Sbjct: 422 VQAA-----GDISISATQPQGNAAADISNTGNIEAAGQLGLTADGM-LSNDGSITAQSIR 475 Query: 406 AVITRTHIRNTGTLG--SQGAVDLRAASVDN-QGLISAGKAMTISLSGQLNNDKTLQASG 462 A + +RN G++G S A L+ V G +SA + +++ G +N +QA+ Sbjct: 476 AGV--QGLRNNGSIGTRSNAAFTLQQGLVQGANGRLSAVSDLNLTMQGDYDNAGRVQAN- 532 Query: 463 DITIDAAAVDNK-GSVVTPGSLAMQIQGNVLNTGKIGAAGAIDFRAAALENRNALYSIRS 521 +T+ AA + N+ G+ + + + + N G+I A ++ Sbjct: 533 TLTLSAANIGNRSGAALQAADITLTALNRLDNAGEISANRQLNI---------------- 576 Query: 522 TIDVQTSGSTLNSGTMEAAQALRLNASALHNSGK---LTAVAAMTLALKQQLNNTGE 575 T+ S LNS T+ + L +NA L N+G L A M+L L + L N G+ Sbjct: 577 -----TADSILNSATI-LGKDLVVNARTLENTGANALLGAGNGMSLWLTEMLANRGK 627 >gi|300310626|ref|YP_003774718.1| filamentous hemagglutinin protein [Herbaspirillum seropedicae SmR1] Length = 2658 Score = 543 bits (1400), Expect = e-155, Method: Compositional matrix adjust. Identities = 621/2091 (29%), Positives = 949/2091 (45%), Gaps = 361/2091 (17%) Query: 655 GVVVAQQDLRIASGELTNAEGRIAAKGKLNIASGEIDNDQGLLQARKTVEIDTHGQALRN 714 G A D+ + S T+ +G + A + G I+N G L A+ ++I T Q LR+ Sbjct: 303 GKTSASDDIVLKSAVGTSNDGVLYAGRNAQLQGGVIEN-AGTLSAQGNLDI-TAAQ-LRS 359 Query: 715 THSSKDQGLRAGGGLRIESGPFINRSGVVVVVGEANLKVSRLDNQGGDMVTAGALNLDAD 774 T + L AG ++ + ++G + V ++ + ++ G D+ G +D Sbjct: 360 TGT-----LAAG----VDQAGNVAQAGNLTVTASGDVLATGVNRAGADLQLVGG-KIDLS 409 Query: 775 SLDNSTG-KLQAQSTMRIDIAGGTLDNHQGLIRADSDLVIQARTLRNDDTQDKEQGIEGR 833 +S G KL AQ++ + + G T++ G DL + T+ T D + Sbjct: 410 HSSSSAGRKLGAQASDALTLGGATVETLAG------DLELGGATI----TLDGAKLTSSA 459 Query: 834 DVTIRAT-DVNNNQGAIRTDRLLKIDSVGSVENRRGLLSS-KGKVGVSDSTPNRSLIIDN 891 D I A ++N G I + + + + SV+N G++S+ G GV S I N Sbjct: 460 DARINAVAGLSNRGGEITSAGAMNV-TAASVDNSAGMISAATGGAGVLSLRSAGS--ISN 516 Query: 892 DDGRIVAAEELDLRAAALIGKGLLLSHQDLRIDVVRDLEQRGQTAASANIDIR--TAGRF 949 GRI A L+L AA++ G+G ++++ D + + + L + +N D+R T+G Sbjct: 517 GQGRIAAGAALNLAAASIQGQGSVIANGDATLSL-QSLNNEAGSLIQSNRDLRITTSGAT 575 Query: 950 SHYGTTAAGASLSISAKGVENHAGAALLGKEVLLTATEASTLLNRGLIDGVTTRLQAGTL 1009 + G A +L+++A ++N AG + L A + N G I G T + L Sbjct: 576 GNQGALKAIGALNLTASQIDNAAGGDISAAATTLQALNGD-INNAGKIGGNTIATTSNAL 634 Query: 1010 DNLGPGRLYGDRLAIRADVLHNAPEIVEGVLRAPVIAARERLDIGAGEIHNSEQALLYSV 1069 +N G + G + I AD L+N+ V A + N + AL+YS+ Sbjct: 635 NN--QGSMIGGDVTINADRLNNSGAAAAIAATNSVQAFVRS------ALTNQDNALIYSL 686 Query: 1070 GDIAIGGTLGQ----DYRAGGRARAVNNTSATINADGRLRIAADTINNHNAHFETSEENK 1125 G + I Q DY R + N+SATI A G L ++ADT Sbjct: 687 GKLVIAADATQSAAGDYLH--RTGTLTNSSATIEAGGDLAVSADT--------------- 729 Query: 1126 PGRRIINYR--LVGSSDFISADKARLISIGNSQIIAPENWRAMGD----EDNFRLLLP-S 1178 I+N R LV + D + S WR+ G D+ L+ + Sbjct: 730 ----IVNKRSTLVIARDIFDGTE--------SWQKYNYYWRSWGSGMSGPDSAGLMAAVT 777 Query: 1179 AEYPFD-------RYGPPVDYNREVLRRDYSSGGIGVVPAYLKPLPESSTETAILPALPE 1231 PF+ RYG +L+ D SS Sbjct: 778 RTLPFNDASAFGSRYG-------SILQLDLSSN-------------------------RA 805 Query: 1232 LFVYLPSDRIWDVFGIARPTAEVPREPDKPAG--CSDADNCVSGDYQQ---RRAAWKAVR 1286 L + S+++W + + A+ + G C + C YQQ R V+ Sbjct: 806 LVQFQGSNQLWVSYKAIKQNADGSYDMTFYEGKNCDGSTLC---PYQQMVWREYTGSRVQ 862 Query: 1287 D----------AQLPAYEKLNEAIRDFNISLRERLFDQWIIHDGTEQIRRTIVTRSAPGM 1336 D A+L E+ DF RER ++ HD I S Sbjct: 863 DQFDPSRYTSPAELKGIGTNGESAYDF----RERSYNGSNYHD-------AITAMSDAAK 911 Query: 1337 ITSGGGMDLVAGVVNNYASQFIAGGALVADRINGT-----TINNIG-PLGRQTVTSTGTA 1390 + + G + + + N AS IAGGAL + NG+ +NNIG + R T+ GTA Sbjct: 912 LNASGRITINTAALTNDASDIIAGGALTINGANGSAASGGVVNNIGYSINR---TAIGTA 968 Query: 1391 QRTF---VKSHSFKADDRRYESAPYASQTIETQFQLEVTPTHGTGSTRDAISRAAITAPT 1447 + V H++ + +A QTI+ Q + ++ + A T Sbjct: 969 VDHYDRHVGHHTYTTLNLTEVTAL---QTIDANIQ----SNQAVSISAQNLNNTTVGAAT 1021 Query: 1448 QPLPATGRTNDLRAPAVDVSLPINALYQVNNSSPTAPLVQTDARFIGNRNWLSSDFLIQR 1507 P A G + +++LP L+ V LV+TD RF + +L SD+++ R Sbjct: 1022 VPTRAGGVGH------ANITLPAGGLFTVRPEPGQRYLVETDRRFTDYKTFLGSDYMLGR 1075 Query: 1508 IREQSGPAPQVQRFADGFYEQQLIQRQIQEATGQRYLKGFNSNEAQYLALMQAGLQQAQA 1567 + P+ +R DGFYEQ+LI QI + TG+++L G+ + EAQY ALM +G+ A + Sbjct: 1076 LTMD--PSMTQKRLGDGFYEQKLINDQIAQLTGKKFLDGYTNAEAQYKALMDSGVASAAS 1133 Query: 1568 QRYALGIALSEAQIAQLKTDIVWLVKQTVTLADGRTQEVLVPQVYL-HPSNIQVSGQQTL 1626 + GIALS Q+A L +DIVW+V VTLADG Q LVP VYL H + + L Sbjct: 1134 FKLTPGIALSADQMAALTSDIVWMVDTEVTLADGSRQHALVPTVYLAHGGSATLQASGAL 1193 Query: 1627 IAGNDLALQTAQDILNRGGTIAARSGVSLRADNLRNLGGRIVGGNVDI------------ 1674 I G D+ L A D +N G + A +++ A ++ N GG + G VD+ Sbjct: 1194 IGGRDVTL--AADTVNNSGIVRAEDKLAVAARDINNTGGELRGDKVDVLATETLNIGTDF 1251 Query: 1675 ---------------AAASDIDNAGGSIDADQQLILRAGRDIAL-TSTSVDTANATTVG- 1717 AA+DI+ G I AD L L A ++ + +T+ T G Sbjct: 1252 QNYGRQGSVTGRQVSLAANDINIIGAKIKADDTLKLAAQNNLTIAAATAQHDVKLTWSGA 1311 Query: 1718 ----------RNINQVASV---------SGKDVVIAAGRDFTANAAVIAARGDVSILAAR 1758 RN A + +G D AAGR+ + I +G+ ++LA Sbjct: 1312 GEREENHGMMRNGGVTAQLQQALGSTIEAGGDASFAAGRNIAVRGSSIDVKGNAALLAGG 1371 Query: 1759 DVNFGAVTEYFRQEIRWANDRGGSNWV---RTLT--------GPNLVDRG-NGAYGTT-- 1804 V AV + +DR N V LT G ++V G NG+ T Sbjct: 1372 SVEVSAVKTATDSVVTGRSDRYDLNVVGHTENLTTSQIAAGKGLSIVASGQNGSGDITLA 1431 Query: 1805 ---------EVGVNRA----------------------VVTGSQEVATQVSGSNIRIQAG 1833 EV +N A + + ++ +GS I + G Sbjct: 1432 ASRLSSKEGEVTLNAAGDISIGAMQKNNDNRIDERGGKAWMKTHDSSSVAAGSLIEGEKG 1491 Query: 1834 QDVITQG----------TQIVADGALQAQAGRDIQIGTANASGSARDQVQRSSGGILSAK 1883 ++I G + I ++G + QA D+ + +S Q S G LS Sbjct: 1492 VNLIATGRSDAKVSVAGSDIYSNGTIAIQAKGDVTVAETRSSSDEWQQAHSESRGFLSRS 1551 Query: 1884 TVRTDDASSFSRQMGSTLSGNAVLVRAGQDVKVTGSDVVSTQGTAVVAGRDVNIASAIDS 1943 + D GSTLSGN V++ AG+++ V GS+VVST+ T++ A DV+I + + Sbjct: 1552 SSDRTDQVRQDMANGSTLSGNKVVIDAGRNIAVRGSEVVSTELTSLRAANDVSITTTQNF 1611 Query: 1944 STRRSFRQERASGVMGAGLGVTVGSRVQSRDVDGHAQTAAASTVGSVEGNVTIVAGNRYT 2003 + + ++++R SG+MGAG G+++GS+ Q + +G + T ASTVGSV GNV I+AGN + Sbjct: 1612 TEQSHYKEDRKSGLMGAGFGISIGSQGQMANGNGSSVTNNASTVGSVNGNVNIIAGNAFR 1671 Query: 2004 QVGSDVLAPKGDIDIAARSVEIRAAEQASRTETEDKFKQSGLTVAVTSPVLSAIQTVGQM 2063 Q+GS V+AP+GDI+I A+SV+I AA AS E+KFKQSGLT+A+ SPV+S +QT Q+ Sbjct: 1672 QIGSQVVAPQGDINILAKSVDIGAAYDASVYTQENKFKQSGLTLAINSPVISVLQTGQQL 1731 Query: 2064 AEAASKTKDRRMQALAGATAGLSVSNAIDAVIAGQGQTIDGKANQIVTGPADPVTGKAPT 2123 +A KT D+RMQALA AT NA DA A ++ P D Sbjct: 1732 IQAGQKTPDKRMQALAAATL---AKNAYDAGAA------------LIDKPTD-------- 1768 Query: 2124 RDANAAEKVGGINLAFSLGASSSQSRSEQTSNTVRGSTVSAGGSVNISAQGGGADSNIVI 2183 G+ + SLG+S S ++ Q S+ GSTV+AGG+VNI A GG S+I + Sbjct: 1769 --------TSGVKITLSLGSSQSSNKVTQASSQAVGSTVAAGGAVNIVAS-GGPRSDINV 1819 Query: 2184 QGSDIKAGVNATLKAANEVRLISAQETSEQHSRN--SGASGSVGVSIG--TDGLLFTASA 2239 GS I AG + +L A +E+ L++AQ QH N SGAS +G ++G +G A Sbjct: 1820 VGSAISAGGDVSLVADHEINLLAAQSAYSQHGNNNSSGASIGIGFAMGGSQNGFTLELGA 1879 Query: 2240 SGSRGKGEGAEVTQVNTHVDAGNKPTIVSGTDTTISGAVVRGKQVEMEVGTSGKGNLNIA 2299 + +RG +G ++ + + AGN+ +++SG DT + G+ V K V +G G+LNI Sbjct: 1880 NRARGNLDGDDLVNKASTISAGNQASLISGGDTNVRGSTVSAKTVAAAIG----GDLNIE 1935 Query: 2300 SQQDSSTFQSRQQSLGGSVSVGTGKM-----GGSVNYSQSNINSNYASVMEQSGIKAGDG 2354 S QD ST+ S+Q S G +S+ S + S S +Y SV+ Q+GIKAGDG Sbjct: 1936 SLQDKSTYGSKQSSAGVGLSLCIPPFCYGASSVSGSLSGSKAKGDYQSVVTQAGIKAGDG 1995 Query: 2355 GFQINVRGNTDLKGAVIASSDKAVAANKNSLTTQTLTQSDIQNIAQYDAQSVGIGVGYNT 2414 GF++ V GNTDLKGAVI+S+ KA+ KN L T TLT SDI N Y+A + G + Sbjct: 1996 GFRLVVAGNTDLKGAVISSTAKAIEDGKNFLQTGTLTYSDISNHDAYEASGYSVS-GSMS 2054 Query: 2415 GKDGGLSATP-----------------PMVVGANGSASSTTRSAISGGVITITDDKKQQE 2457 + G S P GS SS TRS ISGG + ITD++ Q+ Sbjct: 2055 SQLGDQSKAKTEADKAAANSRTGPGGSPGYSDTGGSQSSVTRSGISGGTVIITDEQGQKA 2114 Query: 2458 LTGKTAEQAIASVNREVSSSKEGSNALKPIFN----KEEIENKTAIAGAFTRELGSFLNN 2513 TG++AEQ +AS+NR+V SSK+ S AL ++ ++++E + I AF + + + + Sbjct: 2115 ATGQSAEQILASLNRDVDSSKDSSGALSKAWDGEALRQQVEAEAQIRQAFGQTVAKSIGD 2174 Query: 2514 RAKEADEARRKLDDAIAE-ERGNPVEQRDETRLRRLTEQYLDAEKWSSAGT 2563 AD R L +A + E+ EQ + R +A +W GT Sbjct: 2175 Y---ADTKERDLKNAAKQAEQDGDAEQAAKLR--------AEAARWGEDGT 2214 Score = 248 bits (633), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 213/626 (34%), Positives = 317/626 (50%), Gaps = 66/626 (10%) Query: 14 HAQILIDRNAPPTQQASVLSSGNGVPVVNIQQPNARGLSVNRYRRFDVDARGVILNNAGS 73 + QI+ D NA ++ V ++ NG P+V I P+A G+S N+Y +F+V G ILNNA Sbjct: 37 YPQIVADPNAGAGKRPVVDNTANGRPLVQIATPSAAGVSHNQYSQFNVGPNGAILNNARD 96 Query: 74 ASKTGLAGYVAGNPRLAGGGARVIVNQINATDPSYLRGFIEVAGHQAQVIIANPAGITCA 133 T GYV NP L GG ARVI+N++ +T PS LRG+ EVAG +A+VIIANP GI+C Sbjct: 97 VVLTQQGGYVGANPNLQGGAARVILNEVTSTSPSQLRGYTEVAGQRAEVIIANPNGISCD 156 Query: 134 GCGFINAPRVTLTTGTPII-HQGSLESYRVGGGVLSIEGDGMQAGSADYADLIARAVRIN 192 GCGFIN R LTTG P+ GSLE++RV G + I G+ + D DLIAR+V++N Sbjct: 157 GCGFINTSRGVLTTGVPLFGGNGSLEAFRVSRGAIQIGSGGLNGANTDQLDLIARSVQVN 216 Query: 193 AGLWANRVKVSTGLNAVSADHEQVVPGVAPLDATPLRAIDVAHLGGMYAGHIYLMATEQG 252 LW NR+ + TG N V+ + + +A P +DVA +GGMYA I L+ TE G Sbjct: 217 GELWGNRLNLVTGANRVNY-GDLGLSVIAGEGNAPTIGVDVARMGGMYAQKIMLVGTENG 275 Query: 253 VGAHNGGKLVADT-ELIVTAAGRLENTGTLAARGHTRLEVAGALGNSGSIGGTTGLTVNA 311 VG + G L A +++ G++ +G +A L+ A N G + + Sbjct: 276 VGVRSLGTLAAQAGSFTLSSQGQIALSGKTSASDDIVLKSAVGTSNDGVLYAGRNAQLQG 335 Query: 312 AALDNSGDLLTPAALEIGLKQ---------GLINGGRIGSNALLTVQA-----ATLENRQ 357 ++N+G L L+I Q G+ G + LTV A AT NR Sbjct: 336 GVIENAGTLSAQGNLDITAAQLRSTGTLAAGVDQAGNVAQAGNLTVTASGDVLATGVNRA 395 Query: 358 -----------DLYSSRSSVQLKIGERLVNRGNIEARQTVTANATALDNQGRFISEDALA 406 DL S SS K+G + + + TV A L+ G I+ D Sbjct: 396 GADLQLVGGKIDLSHSSSSAGRKLGAQASDALTLGG-ATVETLAGDLELGGATITLDGAK 454 Query: 407 VITRTHIR---------NTGTLGSQGAVDLRAASVDNQ-GLISA--GKAMTISL--SGQL 452 + + R G + S GA+++ AASVDN G+ISA G A +SL +G + Sbjct: 455 LTSSADARINAVAGLSNRGGEITSAGAMNVTAASVDNSAGMISAATGGAGVLSLRSAGSI 514 Query: 453 NNDK-TLQASGDITIDAAAVDNKGSVVTPGSLAMQIQGNVLNTGKIGAAGAIDFRAAALE 511 +N + + A + + AA++ +GSV+ G + +Q +++ A +L Sbjct: 515 SNGQGRIAAGAALNLAAASIQGQGSVIANGDATLSLQ-------------SLNNEAGSLI 561 Query: 512 NRNALYSIRSTIDVQTSGSTLNSGTMEAAQALRLNASALHNS--GKLTAVAAMTLALKQQ 569 N + + TSG+T N G ++A AL L AS + N+ G ++A A AL Sbjct: 562 QSN------RDLRITTSGATGNQGALKAIGALNLTASQIDNAAGGDISAAATTLQALNGD 615 Query: 570 LNNTGEIGANDALGLTASTLDNRGTL 595 +NN G+IG N + T++ L+N+G++ Sbjct: 616 INNAGKIGGN-TIATTSNALNNQGSM 640 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.312 0.129 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 8,732,876 Number of extensions: 384350 Number of successful extensions: 1422 Number of sequences better than 1.0e-08: 2 Number of HSP's gapped: 1269 Number of HSP's successfully gapped: 11 Length of query: 2948 Length of database: 1,619,870 Length adjustment: 103 Effective length of query: 2845 Effective length of database: 1,132,165 Effective search space: 3221009425 Effective search space used: 3221009425 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 140 (58.5 bits)