BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4449.p
         (351 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313857|ref|YP_003777949.1| bifunctional NMN adenylyltransf...   582   e-167

>gi|300313857|ref|YP_003777949.1| bifunctional NMN
           adenylyltransferase/nudix hydrolase [Herbaspirillum
           seropedicae SmR1]
          Length = 349

 Score =  582 bits (1500), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 306/341 (89%), Positives = 324/341 (95%)

Query: 9   QADAAVVIGRFQPFHHGHLHLLRHALERAASVIVVLGSAFHARNTKNPFTWQERAAMIAG 68
           Q DAAVVIGRFQP H+GHLHLL HALERAA VIVVLGSAFHARNTKNPFTW+ERAAMIAG
Sbjct: 7   QYDAAVVIGRFQPVHNGHLHLLHHALERAAMVIVVLGSAFHARNTKNPFTWEERAAMIAG 66

Query: 69  ALAPAQRERVRFVATRDYYDDRRWSAEVQRLVSAELGPQARVLLVGHFKDASSYYLRHFP 128
           A+ P QRER+RFVATRDYYDDRRWSAEV+R V+AE G QARVLLVGHFKDASSYYLRHFP
Sbjct: 67  AMPPGQRERLRFVATRDYYDDRRWSAEVRRQVAAEAGSQARVLLVGHFKDASSYYLRHFP 126

Query: 129 QWQLESLERAGEVDATDIRRVWFEAEDLEVSLDVLAPMLPVSVRHYLRAWSLLPHYAALV 188
           QWQLE+LERAG++DATDIR+VWFEA+DLEVSLDVLAPM+P SVRHYLRAWSLLPHYAALV
Sbjct: 127 QWQLETLERAGDIDATDIRQVWFEADDLEVSLDVLAPMVPPSVRHYLRAWSLLPHYAALV 186

Query: 189 EEHRQLRKYQTAWAAAPYPPVFTTVDAVIRAAGHVLLVQRKGFPGRGLWAIPGGFLDQRE 248
           EEHRQLRKYQ AWAAAPYPPVFTTVDAVIRAA HVLLVQRKGFPGRGLWAIPGGFLDQRE
Sbjct: 187 EEHRQLRKYQAAWAAAPYPPVFTTVDAVIRAADHVLLVQRKGFPGRGLWAIPGGFLDQRE 246

Query: 249 RLMQAALRELAEETNLAVLEVTLEDALVDVKIFDHPDRSARGRTITHAYYFDLRLEHLPE 308
           RLMQAALRELAEETNLAVL+VTLE+ALVDVKIFDHPDRSARGRTITHAYYFDLRLEHLPE
Sbjct: 247 RLMQAALRELAEETNLAVLDVTLEEALVDVKIFDHPDRSARGRTITHAYYFDLRLEHLPE 306

Query: 309 VEAADDAAQAIWMPIERLVAMEEQFFDDHFHILDSFLNLTA 349
           VEAADDAAQA+W PI++L AME  FFDDHFHILD+FLNLT 
Sbjct: 307 VEAADDAAQAVWTPIDQLAAMEASFFDDHFHILDTFLNLTG 347


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.324    0.136    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,124,220
Number of extensions: 47692
Number of successful extensions: 206
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 206
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 1,619,870
Length adjustment: 86
Effective length of query: 265
Effective length of database: 1,212,660
Effective search space: 321354900
Effective search space used: 321354900
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 131 (55.1 bits)