BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4122.p (516 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300313549|ref|YP_003777641.1| ABC transporter ATPase [Herbasp... 1018 0.0 gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [H... 277 1e-75 gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [H... 271 1e-73 gi|300310741|ref|YP_003774833.1| ABC transporter ATPase [Herbasp... 268 6e-73 gi|300310371|ref|YP_003774463.1| sugar ABC transporter ATPase [H... 250 3e-67 >gi|300313549|ref|YP_003777641.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 518 Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust. Identities = 506/518 (97%), Positives = 509/518 (98%), Gaps = 2/518 (0%) Query: 1 VSAVPLRLEISHVRKAYPGVLANDDVSLAVAPGEIHAVLGENGAGKSTLMKIIFGAVKPD 60 +SAVPLRLEISHVRKAYPGVLANDDVSLAVAPGEIHAVLGENGAGKSTLMKIIFGAVKPD Sbjct: 1 MSAVPLRLEISHVRKAYPGVLANDDVSLAVAPGEIHAVLGENGAGKSTLMKIIFGAVKPD 60 Query: 61 AGEIRWNGAAVQIANPQVARKLGIAMVFQHFSLFDTLTVTENIALGLDAKTDLKELAERI 120 AGEIRWNG AVQIANPQVARKLGIAMVFQHFSLFDTLTVTENIALGLDAKTDLKELAERI Sbjct: 61 AGEIRWNGEAVQIANPQVARKLGIAMVFQHFSLFDTLTVTENIALGLDAKTDLKELAERI 120 Query: 121 TRTGEKYGLELEPQRHVHTLSVGERQRVEIVRALLTEPQLLILDEPTSVLTPQAVEKLFV 180 TRTGEKYGLELEPQRHVHTLSVGERQRVEIVRALLTEPQLLILDEPTSVLTPQAVEKLFV Sbjct: 121 TRTGEKYGLELEPQRHVHTLSVGERQRVEIVRALLTEPQLLILDEPTSVLTPQAVEKLFV 180 Query: 181 TLRRLADEGCSILYISHKLDEIRALCHSATVMRGGRVTGNCDPRNESSASLSRMMIGDEL 240 TLRRLADEGCSILYISHKLDEIRALCHSATVMRGGRVTGNCDPRNESSASLSRMMIGDEL Sbjct: 181 TLRRLADEGCSILYISHKLDEIRALCHSATVMRGGRVTGNCDPRNESSASLSRMMIGDEL 240 Query: 241 VRLQRERNPESMRNERKLHVNRLSLPKAHLFATELKDIECEVRAGEIVGIAGVSGNGQQE 300 VRLQRERNPESMRNERKLHVNRLSLPKAHLFATELKDIECEVRAGEIVGIAGVSGNGQQE Sbjct: 241 VRLQRERNPESMRNERKLHVNRLSLPKAHLFATELKDIECEVRAGEIVGIAGVSGNGQQE 300 Query: 301 LLAALSGEDQRAAPNMIMLSGKAVGDLSPNPRRAAGLGLVPEERLGRGAVPTLSLTANML 360 LLAALSGEDQRAAP+MIML KAVGDLSPNPRRAAGLGLVPEERLGRGAVPTLSLTANML Sbjct: 301 LLAALSGEDQRAAPHMIMLGSKAVGDLSPNPRRAAGLGLVPEERLGRGAVPTLSLTANML 360 Query: 361 LSHQKAPYVKRGMIDFGFTRRAAASIIERFKVKAAGPDAPAKSLSGGNLQKFIVGREMER 420 LSHQKAPYVKRGMIDFGFTRRAAASIIERFKVKAAGPDAPAKSLSGGNLQKFIVGREMER Sbjct: 361 LSHQKAPYVKRGMIDFGFTRRAAASIIERFKVKAAGPDAPAKSLSGGNLQKFIVGREMER 420 Query: 421 KPAVFVVAQPTWGVDVGAAAQIHGEILKLKQEGCAVLVISEELDELFALCDRLHVIAKGR 480 KPAVFVVAQPTWGVDVGAAAQIHGEILKLKQEGCAVLVISEELDELFALCDRLHVIAKGR Sbjct: 421 KPAVFVVAQPTWGVDVGAAAQIHGEILKLKQEGCAVLVISEELDELFALCDRLHVIAKGR 480 Query: 481 LSPSIPIEQATREQVGVWMSGLWDEPKA--AGAEVQHG 516 LSPSIPIEQATREQVGVWMSGLWDEP A G EV +G Sbjct: 481 LSPSIPIEQATREQVGVWMSGLWDEPAALDKGTEVGNG 518 >gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 521 Score = 277 bits (708), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 173/507 (34%), Positives = 280/507 (55%), Gaps = 26/507 (5%) Query: 1 VSAVPLRLEISHVRKAYPGVLANDDVSLAVAPGEIHAVLGENGAGKSTLMKIIFGAVKPD 60 ++ PL L++ +RK++ LA D+ L + PGEIHA++GENGAGKSTLMK++ G PD Sbjct: 1 MTQTPL-LQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPD 59 Query: 61 AGEIRWNGAAVQIANPQVARKLGIAMVFQHFSLFDTLTVTENIALGLDAKT-----DLKE 115 GEI +G V + +P +R GI +++Q ++ ++V N+ +G + +T D Sbjct: 60 QGEILLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAA 119 Query: 116 LAERITRTGEKYGLELEPQRHVHTLSVGERQRVEIVRALLTEPQLLILDEPTSVLTPQAV 175 + R + G LS+ E+Q+VEI RAL+ +++I+DEPT+ L+ + Sbjct: 120 MRSRTDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERET 179 Query: 176 EKLFVTLRRLADEGCSILYISHKLDEIRALCHSATVMRGGRVTGNCDPRNESSASLSRMM 235 E+LF +RRL DEG +I+YISH++ E+ AL TV+R G G S + +MM Sbjct: 180 EQLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQMM 239 Query: 236 IGDELVRLQRERNPESMRNERKLHVNRLSLPKAH----LFATELKDIECEVRAGEIVGIA 291 +G L E +++R + LP L +++ +VRAGE++G A Sbjct: 240 VGRSL--------SEFYQHQRIAPADAAQLPTVMQVRALAGGKIRPASFDVRAGEVLGFA 291 Query: 292 GVSGNGQQELLAALSGEDQRAAPNMIMLSGKAVGDLSPNPRRAAGLGLVPEERLGRGAVP 351 G+ G G+ EL L G D R+ + I+L G+ V P AG+ VPE+R G+G Sbjct: 292 GLVGAGRTELARLLFGADPRSGGD-ILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFL 350 Query: 352 TLSLTANMLLSHQKAPYVKRGMI---DFGFTRRAAASIIERFKVKAAGPDAPAKSLSGGN 408 +++ AN + + + + + G++ G RAA I+R VK A P+ P LSGGN Sbjct: 351 QMAVAANATM-NVASRHTRLGLVRSRSLGGVARAA---IQRLNVKVAHPETPVGKLSGGN 406 Query: 409 LQKFIVGREMERKPAVFVVAQPTWGVDVGAAAQIHGEILKLKQEGCAVLVISEELDELFA 468 QK ++ R +E P V ++ +PT GVD+ A ++I+ + +L +G AV+VIS EL E+ Sbjct: 407 QQKVLLARWLEIAPKVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIG 466 Query: 469 LCDRLHVIAKGRLSPSIPIEQATREQV 495 +CDR+ V+ +G ++ + T+E + Sbjct: 467 ICDRVLVMREGMITGELAGAAITQENI 493 Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 16/245 (6%) Query: 275 LKDIECEVRAGEIVGIAGVSGNGQQELLAALSGEDQRAAPNM--IMLSGKAVGDLSPNPR 332 L D+ +R GEI + G +G G+ L+ LSG AP+ I+L G+ V P Sbjct: 22 LSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVH---APDQGEILLDGRPVALRDPGAS 78 Query: 333 RAAGLGLVPEERLGRGAVPTLSLTANMLLSHQKAPYVKRGMIDFGFTRRAAASIIERFKV 392 RAAG+ L+ +E P +S+ AN+ + + + G+ID R +++ + Sbjct: 79 RAAGINLIYQEL---AVAPNISVAANVFMGSEL--RTRLGLIDHAAMRSRTDAVLRQLGA 133 Query: 393 KAAGPDAPAKSLSGGNLQKFIVGREMERKPAVFVVAQPTWGVDVGAAAQIHGEILKLKQE 452 D A LS Q+ + R + + + ++ +PT + Q+ + +L+ E Sbjct: 134 GFGASDL-AGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLFNVVRRLRDE 192 Query: 453 GCAVLVISEELDELFALCDRLHVIAKGRL-----SPSIPIEQATREQVGVWMSGLWDEPK 507 G A++ IS + E++AL DR+ V+ G I E+ + VG +S + + Sbjct: 193 GLAIIYISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQMMVGRSLSEFYQHQR 252 Query: 508 AAGAE 512 A A+ Sbjct: 253 IAPAD 257 >gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 520 Score = 271 bits (692), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 167/494 (33%), Positives = 277/494 (56%), Gaps = 15/494 (3%) Query: 8 LEISHVRKAYPGVLANDDVSLAVAPGEIHAVLGENGAGKSTLMKIIFGAVKPDAGEIRWN 67 + + +V K +PGVLA D+ +A GE+HA++GENGAGKSTLMKI+ G + D+G+I + Sbjct: 23 IALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDSGDILLD 82 Query: 68 GAAVQIANPQVARKLGIAMVFQHFSLFDTLTVTENIALGLDAK------TDLKELAERIT 121 G V+I P+ A+ LGI ++ Q +L + L+ +NI +G + + D EL + Sbjct: 83 GKPVEITEPRQAQALGIGIIHQELNLMNHLSAAQNIFIGREPRKAMGLFIDEDELNRQAA 142 Query: 122 RTGEKYGLELEPQRHVHTLSVGERQRVEIVRALLTEPQLLILDEPTSVLTPQAVEKLFVT 181 + L+++P V L+V +Q VEI +AL + ++LI+DEPT+ L + +LF Sbjct: 143 AIFARMRLDMDPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAELFRI 202 Query: 182 LRRLADEGCSILYISHKLDEIRALCHSATVMRGGRVTGNCDPRNESSASLSRMMIGDELV 241 +R L +G I+YISHK+DE+R + +VMR G+ + S ++ MM+G L Sbjct: 203 IRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTIISMMVGRALD 262 Query: 242 RLQRERNPESMRNERKLHVNRLSLPKAHLFATELKDIECEVRAGEIVGIAGVSGNGQQEL 301 QR P++ RN+ L V L+ +A ++D+ +R GEI+G AG+ G G+ E+ Sbjct: 263 GEQR-IPPDTSRNDVVLEVRGLNRGRA------IRDVSFTLRKGEILGFAGLMGAGRTEV 315 Query: 302 LAALSGEDQRAAPNMIMLSGKAVGDLSPNPRRAAGLGLVPEERLGRGAVPTLSLTANMLL 361 A+ G D A +I+ GKAV SP A G+G + E+R G + + AN+ L Sbjct: 316 ARAIFGADPLEAGEIIIHGGKAVIK-SPADAVAHGIGYLSEDRKHFGLAVGMDVQANIAL 374 Query: 362 SHQKAPYVKRGMIDFGFTRRAAASIIERFKVKAAGPDAPAKSLSGGNLQKFIVGREMERK 421 S + + G +D R AA + + +K + A+ LSGGN QK ++ + + R Sbjct: 375 SSM-GRFTRVGFMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAKWLLRD 433 Query: 422 PAVFVVAQPTWGVDVGAAAQIHGEILKLKQEGCAVLVISEELDELFALCDRLHVIAKGRL 481 + +PT G+DVGA ++I+ + L ++G A+++IS EL E+ + R+ V+ +GR+ Sbjct: 434 CDILFFDEPTRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVMCEGRI 493 Query: 482 SPSIPIEQATREQV 495 + + AT+E++ Sbjct: 494 TGELARADATQEKI 507 Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 112/228 (49%), Gaps = 8/228 (3%) Query: 275 LKDIECEVRAGEIVGIAGVSGNGQQELLAALSGEDQRAAPNMIMLSGKAVGDLSPNPRRA 334 L + + E+ AGE+ + G +G G+ L+ LSG QR + + I+L GK V P +A Sbjct: 38 LDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDSGD-ILLDGKPVEITEPRQAQA 96 Query: 335 AGLGLVPEERLGRGAVPTLSLTANMLLSHQKAPYVKRGM-IDFGFTRRAAASIIERFKVK 393 G+G++ +E + LS N+ + + P G+ ID R AA+I R ++ Sbjct: 97 LGIGIIHQEL---NLMNHLSAAQNIFIGRE--PRKAMGLFIDEDELNRQAAAIFARMRLD 151 Query: 394 AAGPDAPAKSLSGGNLQKFIVGREMERKPAVFVVAQPTWGVDVGAAAQIHGEILKLKQEG 453 P P L+ Q + + + V ++ +PT ++ A++ I L+ +G Sbjct: 152 M-DPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAELFRIIRDLQAQG 210 Query: 454 CAVLVISEELDELFALCDRLHVIAKGRLSPSIPIEQATREQVGVWMSG 501 ++ IS ++DEL + DR+ V+ G+ ++P+++ + + + M G Sbjct: 211 VGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTIISMMVG 258 >gi|300310741|ref|YP_003774833.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 522 Score = 268 bits (686), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 190/517 (36%), Positives = 280/517 (54%), Gaps = 30/517 (5%) Query: 6 LRLEISHVRKAYPGVLANDDVSLAVAPGEIHAVLGENGAGKSTLMKIIFGAVKPDAGEIR 65 L LEI + K++ A D+VSL + G IHA+LGENGAGKSTL+K + G D G I Sbjct: 4 LELEIINAGKSFGSFRALDEVSLKIRAGTIHALLGENGAGKSTLVKGLVGYSPLDQGSIL 63 Query: 66 WNGAAVQIANPQVARKLGIAMVFQHFSLFDTLTVTENIALGLDAKTDLKELAERITRTGE 125 + V I + +V +LGI MV+QHF+L +LTV EN+ L A+ DL RI + E Sbjct: 64 ADRREVDIRSARVPNQLGIGMVYQHFTLAPSLTVAENLLL---ARGDLP---WRIRWSSE 117 Query: 126 KYGLE---------LEPQRHVHTLSVGERQRVEIVRALLTEPQLLILDEPTSVLTPQAVE 176 + LE L P+R V +LS GE+Q++EI++ L + LILDEPTSVLTPQ + Sbjct: 118 RAVLEEFMAKMPFKLSPERTVSSLSAGEKQKLEILKQLYLRRRFLILDEPTSVLTPQEAD 177 Query: 177 KLFVTLRRLA-DEGCSILYISHKLDEIRALCHSATVMRGGRVTGNCDPRNESSASLSRMM 235 ++ + L + ++L I+HK E+ A TV+R GR+ G+ S L+ M Sbjct: 178 EVLGLMHALTRQQELTVLMITHKFHEVSAYADDVTVLRKGRLVGSARVAETSPDMLAHWM 237 Query: 236 IGDELV-RLQRERNPESMRNERKLHVNRLSLPKAHLFATELKDIECEVRAGEIVGIAGVS 294 +G + Q R ++ L V L++ A ++ + +VR GEIVG+AG+S Sbjct: 238 MGQARAEKAQVARPAVPVQASVGLEVRDLTVNNDRGVAA-VRALSLQVRRGEIVGLAGIS 296 Query: 295 GNGQQELLAALSGEDQRAAPNMIMLSGKAVGDLSPNPRRAAGLGLVPEERLGRGAVPTLS 354 GNGQ+EL+ AL G+ + I + G RR L PEE L + +S Sbjct: 297 GNGQKELVEALLGQRRLLLGE-IRVEGAPYAATREEMRRLRVFAL-PEEPLRNACIAGMS 354 Query: 355 LTANMLLSHQKAPYVKRG--MIDFGFTRRAAASIIERFKVKAAGPDAPAKSLSGGNLQKF 412 + NM L + KRG ID +R A ++I F VK P+ P +LSGGN+Q+ Sbjct: 355 VAENMALRNFDVAPFKRGGWRIDRSAMKRQAQALISAFNVKPPVPERPIGTLSGGNVQRA 414 Query: 413 IVGREM-----ERKPAVFVVAQPTWGVDVGAAAQIHGEILKLKQEGCAVLVISEELDELF 467 ++ RE+ + V +VA P +G+D + A IH +L+ + G AVL++SE+LDEL Sbjct: 415 VLARELGEDGQDGAANVLIVANPVFGLDFASVADIHARLLQARARGAAVLLVSEDLDELL 474 Query: 468 ALCDRLHVIAKGRL---SPSIPIEQATREQVGVWMSG 501 L DR+ V+ +GR+ + + E A R +G WM+G Sbjct: 475 ELSDRILVMTEGRIVHVAQDVAKEGADRAALGRWMAG 511 >gi|300310371|ref|YP_003774463.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 518 Score = 250 bits (638), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 180/521 (34%), Positives = 281/521 (53%), Gaps = 35/521 (6%) Query: 8 LEISHVRKAYPGVLANDDVSLAVAPGEIHAVLGENGAGKSTLMKIIFGAVKPD---AGEI 64 LE+ + K++PGV A ++V+LAV GEIHA++GENGAGKSTLMK++ G V P +G+I Sbjct: 5 LEMRGIEKSFPGVKALNNVNLAVREGEIHAIVGENGAGKSTLMKVLSG-VYPHGSYSGDI 63 Query: 65 RWNGAAVQIANPQVARKLGIAMVFQHFSLFDTLTVTENIALGLD-AKTDLKELAERITRT 123 + G + + + LGI ++ Q +L L+V EN+ LG + A+ + + + R Sbjct: 64 VYKGEVRAFKDIRDSEHLGIIIIHQELALVPLLSVMENLFLGNEQARGGVIDWEQSYVRA 123 Query: 124 GE---KYGLELEPQRHVHTLSVGERQRVEIVRALLTEPQLLILDEPTSVLTPQAVEKLFV 180 E K GL+ P V L VG++Q +EI +AL E +LLILDEPT+ L + L Sbjct: 124 KELLAKVGLKESPLTQVGDLGVGKQQLIEIAKALSKEVKLLILDEPTASLNESDSDALLE 183 Query: 181 TLRRLADEGCSILYISHKLDEIRALCHSATVMRGGRVTGNCDPRNE--SSASLSRMMIGD 238 L L +G + + ISHKL+EI + S TV+R G D R E S + + M+G Sbjct: 184 LLLELKRQGIASILISHKLNEISKVADSITVLRDGTTVDTFDCRAEPISEDRIIQHMVGR 243 Query: 239 ELVRLQRERNPE---------SMRNERKLHVNRLSLPKAHLFATELKDIECEVRAGEIVG 289 E+ +R+P+ R LH +RL++ KD+ VRAGEIVG Sbjct: 244 EMADRYPQRDPQIGEVIFEVRDWRVHHPLHTDRLAI----------KDVNMSVRAGEIVG 293 Query: 290 IAGVSGNGQQELLAALSGEDQ-RAAPNMIMLSGKAVGDLSPNPRR-AAGLGLVPEERLGR 347 IAG+ G G+ EL ++ G + L GK V DLS + A G+ V E+R G Sbjct: 294 IAGLMGAGRTELAKSIFGRAYGKKITGQAFLHGKEV-DLSTIEKAIAKGIAYVTEDRKGD 352 Query: 348 GAVPTLSLTANMLLSHQKAPYVKRGMIDFGFTRRAAASIIERFKVKAAGPDAPAKSLSGG 407 G V + N+ L++ +R +ID + AA ++ +++ + +LSGG Sbjct: 353 GLVLEEDIKKNISLANL-GGVSERTVIDEAREYKIAADFKQQMRIRCSSVLQKVVNLSGG 411 Query: 408 NLQKFIVGREMERKPAVFVVAQPTWGVDVGAAAQIHGEILKLKQEGCAVLVISEELDELF 467 N QK ++ + + +P V ++ +PT G+DVGA +I+ I KL EG +++IS E+ EL Sbjct: 412 NQQKVVLSKWLFSQPEVLILDEPTRGIDVGAKFEIYNIISKLAAEGKCIIMISSEMPELL 471 Query: 468 ALCDRLHVIAKGRLSPSIPIEQATREQV--GVWMSGLWDEP 506 +CDR++V+ +G+ +P +AT+E + + + DEP Sbjct: 472 GMCDRIYVMNEGQFVGHLPKAEATQENIMRAIMRNKRIDEP 512 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.318 0.135 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,659,863 Number of extensions: 72773 Number of successful extensions: 851 Number of sequences better than 1.0e-08: 132 Number of HSP's gapped: 540 Number of HSP's successfully gapped: 173 Length of query: 516 Length of database: 1,619,870 Length adjustment: 89 Effective length of query: 427 Effective length of database: 1,198,455 Effective search space: 511740285 Effective search space used: 511740285 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 133 (55.8 bits)