BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3611.p
         (262 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312996|ref|YP_003777088.1| 1-acyl-sn-glycerol-3-phosphate ...   430   e-122

>gi|300312996|ref|YP_003777088.1| 1-acyl-sn-glycerol-3-phosphate
           O-acyltransferase [Herbaspirillum seropedicae SmR1]
          Length = 262

 Score =  430 bits (1105), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 218/262 (83%), Positives = 241/262 (91%)

Query: 1   MIERHLSQLDRGWRVLATGLCFAVFGVGGLLLRLVIFPILQLLVRNARQRVLWARHIIRL 60
           M++R  + +DRGWR+LATG+CFA+FG+GGLLLRLV+FPILQLLVR+A+QRVLWARHIIRL
Sbjct: 1   MLDRVFALIDRGWRILATGMCFALFGLGGLLLRLVVFPILQLLVRDAQQRVLWARHIIRL 60

Query: 61  AFRAFVELMRMVGVIRYEITGLERLNRNGLLILANHPTLIDTVLLMAFVRHADCIVKNAL 120
           AFRAFVELMR+ GVIRYEI+GLERLNRNG LILANHPTLIDTVLLMAFVRHADCIVKNAL
Sbjct: 61  AFRAFVELMRICGVIRYEISGLERLNRNGQLILANHPTLIDTVLLMAFVRHADCIVKNAL 120

Query: 121 WRNPFTRGPIRAAGYISNDQGPDLIDDCIQSVRAGGNLIIFPEGTRTPSNGDINLKRGAA 180
           WRNPFTRGPIRAAGYISNDQGPDLI+DCI+S+R+GGNLIIFPEGTRTP++G I+LKRGAA
Sbjct: 121 WRNPFTRGPIRAAGYISNDQGPDLIEDCIRSIRSGGNLIIFPEGTRTPTDGQISLKRGAA 180

Query: 181 NVAVRGQCAITPVRIRCTPGTLSKGEKWWQVPPTRAHFRLHIGEDIHLDRVIGDELSHGA 240
           NVAVR  C ITPVRIRCTP TLSKGEKWWQVP  RAHFRL IG+D+HLD +IG    H A
Sbjct: 181 NVAVRCGCPITPVRIRCTPVTLSKGEKWWQVPARRAHFRLQIGDDLHLDHIIGAGQPHPA 240

Query: 241 HNPTLAARQLTTYLQQYFMKEQ 262
            NPTLAARQLTTYLQQYFMKE 
Sbjct: 241 DNPTLAARQLTTYLQQYFMKEN 262


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.328    0.143    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 768,861
Number of extensions: 29949
Number of successful extensions: 101
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 102
Number of HSP's successfully gapped: 1
Length of query: 262
Length of database: 1,619,870
Length adjustment: 83
Effective length of query: 179
Effective length of database: 1,226,865
Effective search space: 219608835
Effective search space used: 219608835
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 129 (54.3 bits)