BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3396.p (843 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300313405|ref|YP_003777497.1| branched-chain amino acid ABC t... 245 9e-66 gi|300313300|ref|YP_003777392.1| branched-chain amino acid ABC t... 226 7e-60 gi|300310683|ref|YP_003774775.1| amino acid ABC transporter comp... 206 7e-54 gi|300313935|ref|YP_003778027.1| branched-chain amino acid ABC t... 190 5e-49 gi|300313283|ref|YP_003777375.1| branched-chain amino acid ABC t... 187 2e-48 >gi|300313405|ref|YP_003777497.1| branched-chain amino acid ABC transporter ATP-binding protein/permease [Herbaspirillum seropedicae SmR1] Length = 596 Score = 245 bits (626), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 199/612 (32%), Positives = 298/612 (48%), Gaps = 52/612 (8%) Query: 5 HKTSQPLWIGAAALIATPLLLPLLGLT---TTSATDVVIYAIAAMGLNLLVGYTGLTSFG 61 H+ + P A A L LP LGL T + V +YAI A+GL LL G GL SFG Sbjct: 7 HRAALP-----ALFFAIVLALPQLGLPPFWVTLLSYVGLYAIVALGLVLLTGVAGLISFG 61 Query: 62 HGAWFGVGAYAAALSQTHWFPGQIVMPLLFTLAFIAMAALLVGFLILRRRGVYFSLLTLA 121 A+ G+GAY A T F + LL +A A +A L+G L +R G Y L T+A Sbjct: 62 QAAFVGMGAYTTAYLTTQ-FGLSPWIGLLAGIALTACSAFLIGSLTMRISGHYLPLSTIA 120 Query: 122 LSALTFAVAFRWTDFTGGESGLGGIVRPVVAGIDLDRPIPYQVLVSLIALAVLFCLHRLI 181 L+ F + G G+ GI + ++ +L+ ++ + L + + Sbjct: 121 WG-LSLYYLFGNLEMLGKHDGINGIPVITIGSVEFGNGASMYLLIWVVLILALVSVVNFL 179 Query: 182 RSPFGHTIVAIRENEQRARFQGYATIVYKLHMFVISATVTGLAGGLLAFHHRFVSAEPTS 241 S G + A+R G T K+ +FV +A + G++G L A + V+ P Sbjct: 180 DSRAGRAVRALRFGTVMPEAMGVDTARLKIVIFVYAAVLAGISGWLYAHLQQAVNPTPFG 239 Query: 242 VAFSGELLAMVVIGGMRSFLGPALGALFYILFRECLSIWTENWL--------LWFGLAFV 293 + + + L MVV+GG G LGA + L W L + FG+A V Sbjct: 240 LKYGIDYLLMVVVGGAGHVAGAILGAGLLAVLSNFLQEWLPGVLGTGGNFEAIVFGIALV 299 Query: 294 GFILFSPTGLVGIWRQLQ-----RRLRP-PAEVGAAMSARQIIDGLPLPEFLQPPPRPGV 347 F+ F+ GL W +LQ RR RP PA D PL + + P R V Sbjct: 300 IFLQFANEGL---WPRLQARFGRRRPRPLPA------------DAAPLAQ-MAKPARGEV 343 Query: 348 VLEAKDIEIRFGGIQAVSNAQIALHAGEIHALIGPNGAGKTTTFNLISGMFAPHGGSVLL 407 +L+ + +FGG+ AV+N ++ AGEI LIGPNGAGK+TTFNL++G+ + G +L Sbjct: 344 ILDVEAARKQFGGLVAVNNVSFSVKAGEIVGLIGPNGAGKSTTFNLVTGVLSVSSGKLLY 403 Query: 408 NGEPIHGLPPSDICQRGLARSFQITNLFKGLSIYENLRLSLQARHPGRYNMWRDI----- 462 G+ + GL DI RG+AR+FQ L G+S+ EN ++ A G++ R I Sbjct: 404 RGQSLAGLSSRDISSRGIARTFQHVRLVPGMSVLEN--AAMGAFRRGQFAPQRGILASLL 461 Query: 463 ----DSYPEIHAETDALMRFLGLKGIDDIQGGALSYGGQRLVDLGIALGSKPQVLLMDEP 518 I +E + +GL + D G+L+ G QR++++ AL P +LL+DEP Sbjct: 462 RANRSEEARILSEARRQLERVGLGDLVDRPAGSLALGQQRILEIARALCCDPALLLLDEP 521 Query: 519 LAGLAAAERERVSRLV-QIIAANIPVLIVEHDIDRVLGFSHQVTVMNQGSVLMTGTPEQA 577 AGL E+E ++ L+ ++ + VL+VEHD+D V+ + + VM G+ + GTP Q Sbjct: 522 AAGLRLKEKEALAALLDKLRGEGMAVLLVEHDMDFVMQLTDHIVVMEFGAKIAEGTPAQI 581 Query: 578 RADQRVQEIYTG 589 + V E Y G Sbjct: 582 QVHPAVLEAYLG 593 Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/237 (36%), Positives = 129/237 (54%), Gaps = 17/237 (7%) Query: 609 LLAFEQVNAFYGKSHILNDASLDVRQGEIVALLGRNGAGKSTLLKTLTGLLKPASGAIHY 668 +L E +G +N+ S V+ GEIV L+G NGAGKST +TG+L +SG + Y Sbjct: 344 ILDVEAARKQFGGLVAVNNVSFSVKAGEIVGLIGPNGAGKSTTFNLVTGVLSVSSGKLLY 403 Query: 669 QGRDIAGLAAPEIARLGIGYVPQGRGLFAGMTVAENLALGRLAR-KTDGSDGVAWS---- 723 +G+ +AGL++ +I+ GI Q L GM+V EN A+G R + G+ S Sbjct: 404 RGQSLAGLSSRDISSRGIARTFQHVRLVPGMSVLENAAMGAFRRGQFAPQRGILASLLRA 463 Query: 724 ----EEQILHYFPRLKER------LHTHADFLSGGEQQMVAVARALSGNVKLLLLDEPFE 773 E +IL R ER + A L+ G+Q+++ +ARAL + LLLLDEP Sbjct: 464 NRSEEARILSEARRQLERVGLGDLVDRPAGSLALGQQRILEIARALCCDPALLLLDEPAA 523 Query: 774 GLAPAVVQELFKVFDQLRRE-ISIVIVEHNLDLVLALADRVFALERGAVFHTG-PAQ 828 GL + L + D+LR E +++++VEH++D V+ L D + +E GA G PAQ Sbjct: 524 GLRLKEKEALAALLDKLRGEGMAVLLVEHDMDFVMQLTDHIVVMEFGAKIAEGTPAQ 580 >gi|300313300|ref|YP_003777392.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] Length = 597 Score = 226 bits (575), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 192/591 (32%), Positives = 292/591 (49%), Gaps = 42/591 (7%) Query: 24 LLPLLGLTTTSATDVVIYAIAAMGLNLLVGYTGLTSFGHGAWFGVGAYAAA-LSQTHWFP 82 LLP A + +YA+ A+GL LL G G+TSFG A+ G+GAY + L+ H Sbjct: 21 LLPTPQFWVIQANYIGLYALVAIGLVLLTGIGGMTSFGQAAFVGMGAYTTSYLTTVHGVS 80 Query: 83 GQIVMPLLFTLAFIAMAALLVGFLILRRRGVYFSLLTLALSALTFAVAFRWTDFTGGESG 142 + +P+ L ++A ++G + LR G Y L T+A ++ F DF G G Sbjct: 81 PWLTLPV--GLFITGVSAYVLGRITLRMSGHYLPLATIAWG-ISLYFLFGKVDFLGKYDG 137 Query: 143 LGGIVRPVVAGIDLDRPIPYQVLVSLIALAVLFCLHRLIRSPFGHTIVAIRENEQRARFQ 202 + GI +AG+DL + L+ I LA + L+ S G I A++ A Sbjct: 138 ISGIPALQLAGLDLAKERHLYYLIWAIVLAAAWVSLNLLDSRAGRAIRALKGGRSMAEAM 197 Query: 203 GYATIVYKLHMFVISATVTGLAGGLLAFHHRFVSAEPTSVAFSGELLAMVVIGGMRSFLG 262 G T YK+ +FV +A + ++G L A R V+ P S+A E L +VV+GG+ G Sbjct: 198 GVDTGRYKILIFVFAALLASVSGWLFAHMQRTVNPSPFSLAMGIEYLFIVVVGGIAHIWG 257 Query: 263 PALGALFYILFRECLSIWTENWL--------LWFGLAFVGFILFSPTGLVGIWRQLQRRL 314 LGA L + L + L + FGL + + ++ GL R L R Sbjct: 258 ALLGAGVLKLLSDQLQVLLPALLGDGGSYESIVFGLILILLLKYAGGGLWPWVRALWLRA 317 Query: 315 RPPAEV------GAAMSARQII-DGLPLPEFLQPPPRPGVVLEAKDIEIRFGGIQAVSNA 367 P A AM R + G PL LE I RFGG+ AV++ Sbjct: 318 FPTAPAPLRVAHATAMDKRAAVARGAPL-------------LEVDQINKRFGGLVAVNDV 364 Query: 368 QIALHAGEIHALIGPNGAGKTTTFNLISGMFAPHGGSVLLNGEPIHGLPPSDICQRGLAR 427 + AGEI LIGPNGAGK+TTFNL++G+ GG V NG I GLP I + G+AR Sbjct: 365 SFKVKAGEIVGLIGPNGAGKSTTFNLVTGLLHASGGRVGFNGRDIAGLPARAIARLGIAR 424 Query: 428 SFQITNLFKGLSIYENLRLSLQARHPGRYNMWRDIDSYPEIH-AETDAL-------MRFL 479 +FQ L G+++ EN+ L R + + +++ + AE AL + + Sbjct: 425 TFQHVRLLPGMTVLENVALGAHMRSQQGF-LKNTVNAMLHLERAEEQALLDEAARALHRV 483 Query: 480 GLKGIDDIQGGALSYGGQRLVDLGIALGSKPQVLLMDEPLAGLAAAERERVSRLVQIIAA 539 GL+ + Q G L+ G QR++++ AL P +LL+DEP AGL E++ +S+++Q + A Sbjct: 484 GLQHLMHEQAGNLALGQQRILEIARALCCDPLLLLLDEPAAGLRHLEKQALSKVLQELRA 543 Query: 540 N-IPVLIVEHDIDRVLGFSHQVTVMNQGSVLMTGTPEQARADQRVQEIYTG 589 + + +L+VEHD++ V+ + + VM G+ + GTP++ V E Y G Sbjct: 544 DGMSILLVEHDMEFVMELTDHIVVMEFGAKIAEGTPQEIARHPAVIEAYLG 594 Score = 130 bits (326), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 98/238 (41%), Positives = 133/238 (55%), Gaps = 16/238 (6%) Query: 609 LLAFEQVNAFYGKSHILNDASLDVRQGEIVALLGRNGAGKSTLLKTLTGLLKPASGAIHY 668 LL +Q+N +G +ND S V+ GEIV L+G NGAGKST +TGLL + G + + Sbjct: 345 LLEVDQINKRFGGLVAVNDVSFKVKAGEIVGLIGPNGAGKSTTFNLVTGLLHASGGRVGF 404 Query: 669 QGRDIAGLAAPEIARLGIGYVPQGRGLFAGMTVAENLALGRLARKTDG--SDGV------ 720 GRDIAGL A IARLGI Q L GMTV EN+ALG R G + V Sbjct: 405 NGRDIAGLPARAIARLGIARTFQHVRLLPGMTVLENVALGAHMRSQQGFLKNTVNAMLHL 464 Query: 721 AWSEEQ-ILHYFPR------LKERLHTHADFLSGGEQQMVAVARALSGNVKLLLLDEPFE 773 +EEQ +L R L+ +H A L+ G+Q+++ +ARAL + LLLLDEP Sbjct: 465 ERAEEQALLDEAARALHRVGLQHLMHEQAGNLALGQQRILEIARALCCDPLLLLLDEPAA 524 Query: 774 GLAPAVVQELFKVFDQLRRE-ISIVIVEHNLDLVLALADRVFALERGAVFHTGPAQPL 830 GL Q L KV +LR + +SI++VEH+++ V+ L D + +E GA G Q + Sbjct: 525 GLRHLEKQALSKVLQELRADGMSILLVEHDMEFVMELTDHIVVMEFGAKIAEGTPQEI 582 >gi|300310683|ref|YP_003774775.1| amino acid ABC transporter composite ATP-binding protein/permease [Herbaspirillum seropedicae SmR1] Length = 627 Score = 206 bits (523), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 186/585 (31%), Positives = 278/585 (47%), Gaps = 66/585 (11%) Query: 55 TGLTSFGHGAWFGVGAY-AAALS-------------QTHWFPGQIVMPLLFTLAFIAMAA 100 GLTSFG A+ G+GAY +AALS Q+ W P L L A+ A Sbjct: 56 AGLTSFGQAAFVGLGAYFSAALSAKVLPLPEALLWLQSPW-PA-----LAVALVLTALLA 109 Query: 101 LLVGFLILRRRGVYFSLLTLALSALTFAVAFRWTDFTGGESGLGGIVRPVVAGIDLDRPI 160 VG + L+ G Y L T+A ++ F + GG++G+ GI G+ LD Sbjct: 110 FAVGSVTLKLSGHYLPLGTIAW-GISLYFIFGTLESMGGQTGMSGIPSIAFLGVVLDSD- 167 Query: 161 PYQVLVSLIALAVLF---CLHRLIRSPFGHTIVAIRENEQRARFQGYATIVYKLHMFVIS 217 + + LI +AVL L L+ S G I A++ A G T ++ +FVI+ Sbjct: 168 --RAMFGLIWVAVLLGVAALRNLLDSREGRAIRALKGGIVMAEAMGVNTARMRIVVFVIA 225 Query: 218 ATVTGLAGGLLAFHHRFVSAEPTSVAFSGELLAMVVIGGMRSFLGPALGALFYILFRECL 277 A + L+G L RFV+ P + F + L M V+GG G LG+ ++ +E Sbjct: 226 AVLAALSGWLYVHMQRFVNPSPFGLGFGIDYLFMAVLGGASHVWGAVLGSSLIVVLKE-- 283 Query: 278 SIWTENWL------------LWFGLAFVGFILFSPTGLVGIWRQLQRRLRPPAEVGAAMS 325 W + L + FGL V + S G IW L R L P + Sbjct: 284 --WLQGLLPVVLGRSGNFETIVFGLLIVVLLQRSREG---IWPYLAR-LAP------VRT 331 Query: 326 ARQIIDGLP--LPEFLQPPPRPGVVLEAKDIEIRFGGIQAVSNAQIALHAGEIHALIGPN 383 R +ID LP P P+ VVL+ + + +FGG+ A +N + + AGE+ ALIGPN Sbjct: 332 RRLVIDAQAEALPRRPMPTPQE-VVLDVRSVTRKFGGLVANNNMSLKVMAGEVLALIGPN 390 Query: 384 GAGKTTTFNLISGMFAPHGGSVLLNGEPIHGLPPSDICQRGLARSFQITNLFKGLSIYEN 443 GAGK+T FN ISG+ P GSV G+ + G I G++RSFQ L +++ EN Sbjct: 391 GAGKSTLFNQISGVDTPTSGSVQFRGQEVTGRGSRHIAGLGMSRSFQHVRLMPRMTVLEN 450 Query: 444 LRLS--LQARHPGRYNMWR-DIDSYPEIHAETDALMRFLGLKGIDDIQGGALSYGGQRLV 500 + + L+ + +M R D I AE + +GLK GALS G QR++ Sbjct: 451 VAIGAYLRGQRGVLASMLRLDRKEEARILAEAARQIERVGLKAQMYELAGALSLGQQRIL 510 Query: 501 DLGIALGSKPQVLLMDEPLAGLAAAERERVSRLV-QIIAANIPVLIVEHDIDRVLGFSHQ 559 ++ AL + P +LL+DEP AGL E++ ++ L+ ++ + +L+VEHD+D V+ + Sbjct: 511 EIARALAADPCLLLLDEPAAGLRLGEKQALAELLRKLRGEGMAILLVEHDMDFVMELVDR 570 Query: 560 VTVMNQGSVLMTGTPEQARADQRVQEIYTGHGTPPVTGRSQADSG 604 + VM+ G + G P + + V E Y G +AD G Sbjct: 571 IVVMDFGQKIAEGLPADIQNNPAVLEAYLG------VADEEADEG 609 Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 123/215 (57%), Gaps = 18/215 (8%) Query: 626 NDASLDVRQGEIVALLGRNGAGKSTLLKTLTGLLKPASGAIHYQGRDIAGLAAPEIARLG 685 N+ SL V GE++AL+G NGAGKSTL ++G+ P SG++ ++G+++ G + IA LG Sbjct: 372 NNMSLKVMAGEVLALIGPNGAGKSTLFNQISGVDTPTSGSVQFRGQEVTGRGSRHIAGLG 431 Query: 686 IGYVPQGRGLFAGMTVAENLALGRLARKTDGSDGVAWS--------EEQILHYFPR---- 733 + Q L MTV EN+A+G R G GV S E +IL R Sbjct: 432 MSRSFQHVRLMPRMTVLENVAIGAYLR---GQRGVLASMLRLDRKEEARILAEAARQIER 488 Query: 734 --LKERLHTHADFLSGGEQQMVAVARALSGNVKLLLLDEPFEGLAPAVVQELFKVFDQLR 791 LK +++ A LS G+Q+++ +ARAL+ + LLLLDEP GL Q L ++ +LR Sbjct: 489 VGLKAQMYELAGALSLGQQRILEIARALAADPCLLLLDEPAAGLRLGEKQALAELLRKLR 548 Query: 792 RE-ISIVIVEHNLDLVLALADRVFALERGAVFHTG 825 E ++I++VEH++D V+ L DR+ ++ G G Sbjct: 549 GEGMAILLVEHDMDFVMELVDRIVVMDFGQKIAEG 583 >gi|300313935|ref|YP_003778027.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 234 Score = 190 bits (482), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 104/234 (44%), Positives = 148/234 (63%), Gaps = 8/234 (3%) Query: 609 LLAFEQVNAFYGKSHILNDASLDVRQGEIVALLGRNGAGKSTLLKTLTGLLKPASGAIHY 668 +L E V+ +YGKSHIL SL V GE+V LLGRNGAGK+T LK++ G++ P G + + Sbjct: 2 ILQVEDVHGYYGKSHILQGVSLQVDAGEVVTLLGRNGAGKTTTLKSIVGVVPPVQGRVLF 61 Query: 669 QGRDIAGLAAPEIARLGIGYVPQGRGLFAGMTVAENLALGRLARKTDGSDGVAWSEEQIL 728 +G+ I+GL + +IA G+ VP+ RG+F +TV ENL + ARK AW E+I Sbjct: 62 EGQLISGLPSYKIAARGVCLVPEHRGIFKLLTVEENLTMA--ARKES-----AWGLEEIY 114 Query: 729 HYFPRLKERLHTHADFLSGGEQQMVAVARALSGNVKLLLLDEPFEGLAPAVVQELFKVFD 788 FPRLKER LSGGEQQM+A+ARAL + ++L+LDEP EGLAP +V E+ Sbjct: 115 AIFPRLKERRKNGGGQLSGGEQQMLAIARALMTHPRVLMLDEPVEGLAPVIVDEIVAQIR 174 Query: 789 QLRRE-ISIVIVEHNLDLVLALADRVFALERGAVFHTGPAQPLLTDLAYRKQIL 841 Q++ +SI++VE NL++ LADR + +E+G + + G L D + + L Sbjct: 175 QIKATGMSIILVEQNLEVCTQLADRHYIVEQGRIVYHGSNAEFLADEGVKDRYL 228 Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 77/244 (31%), Positives = 130/244 (53%), Gaps = 16/244 (6%) Query: 347 VVLEAKDIEIRFGGIQAVSNAQIALHAGEIHALIGPNGAGKTTTFNLISGMFAPHGGSVL 406 ++L+ +D+ +G + + + AGE+ L+G NGAGKTTT I G+ P G VL Sbjct: 1 MILQVEDVHGYYGKSHILQGVSLQVDAGEVVTLLGRNGAGKTTTLKSIVGVVPPVQGRVL 60 Query: 407 LNGEPIHGLPPSDICQRGLARSFQITNLFKGLSIYENLRLSLQARHPGRYNMWRDIDSYP 466 G+ I GLP I RG+ + +FK L++ EN L++ AR + + W Sbjct: 61 FEGQLISGLPSYKIAARGVCLVPEHRGIFKLLTVEEN--LTMAAR---KESAW----GLE 111 Query: 467 EIHAETDALMRFLGLKGIDDIQGGALSYGGQRLVDLGIALGSKPQVLLMDEPLAGLA-AA 525 EI+A F LK GG LS G Q+++ + AL + P+VL++DEP+ GLA Sbjct: 112 EIYA------IFPRLKERRKNGGGQLSGGEQQMLAIARALMTHPRVLMLDEPVEGLAPVI 165 Query: 526 ERERVSRLVQIIAANIPVLIVEHDIDRVLGFSHQVTVMNQGSVLMTGTPEQARADQRVQE 585 E V+++ QI A + +++VE +++ + + ++ QG ++ G+ + AD+ V++ Sbjct: 166 VDEIVAQIRQIKATGMSIILVEQNLEVCTQLADRHYIVEQGRIVYHGSNAEFLADEGVKD 225 Query: 586 IYTG 589 Y G Sbjct: 226 RYLG 229 >gi|300313283|ref|YP_003777375.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 233 Score = 187 bits (476), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 104/229 (45%), Positives = 146/229 (63%), Gaps = 10/229 (4%) Query: 607 PRLLAFEQVNAFYGKSHILNDASLDVRQGEIVALLGRNGAGKSTLLKTLTGLLKPASGAI 666 P LLA ++V+A YG+S +L D S +++GE +ALLGRNG GK++LL TL GL + G+I Sbjct: 2 PELLALDRVSAGYGQSIVLEDVSFTMQEGESLALLGRNGVGKTSLLITLMGLTRLHGGSI 61 Query: 667 HYQGRDIAGLAAPEIARLGIGYVPQGRGLFAGMTVAENLALGRLARKTDGSDGVAWSEEQ 726 ++G DIA +A + A G+G+VPQ R +F ++V E+L T G W ++ Sbjct: 62 RWRGGDIARVATHKRAHAGLGWVPQERFMFPSLSVEEHL--------TVVERGGKWDLQK 113 Query: 727 ILHYFPRLKERLHTHADFLSGGEQQMVAVARALSGNVKLLLLDEPFEGLAPAVVQELFKV 786 I FPRL ER H + LSGGEQQM+A+ARAL + +LLLDEP EGLAP +VQEL KV Sbjct: 114 IYQIFPRLHERRHNMGNQLSGGEQQMLAIARALMVSPSILLLDEPMEGLAPIIVQELLKV 173 Query: 787 FDQLRRE--ISIVIVEHNLDLVLALADRVFALERGAVFHTGPAQPLLTD 833 +L E +S+++VE + + L+L R L+RG + H +Q LL D Sbjct: 174 IRRLVSEEGMSVIVVEQHARMALSLTQRAIVLDRGRIVHASDSQSLLAD 222 Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 18/225 (8%) Query: 358 FGGIQAVSNAQIALHAGEIHALIGPNGAGKTTTFNLISGMFAPHGGSVLLNGEPIHGLPP 417 +G + + + GE AL+G NG GKT+ + G+ HGGS+ G I + Sbjct: 14 YGQSIVLEDVSFTMQEGESLALLGRNGVGKTSLLITLMGLTRLHGGSIRWRGGDIARVAT 73 Query: 418 SDICQRGLARSFQITNLFKGLSIYENLRLSLQARHPGRYNMWRDIDSYPEIHAETDALMR 477 GL Q +F LS+ E+L + G++++ + +P +H + Sbjct: 74 HKRAHAGLGWVPQERFMFPSLSVEEHLTV---VERGGKWDLQKIYQIFPRLHERRHNM-- 128 Query: 478 FLGLKGIDDIQGGALSYGGQRLVDLGIALGSKPQVLLMDEPLAGLAAAERERVSRLVQII 537 G LS G Q+++ + AL P +LL+DEP+ GLA + + ++++ + Sbjct: 129 -----------GNQLSGGEQQMLAIARALMVSPSILLLDEPMEGLAPIIVQELLKVIRRL 177 Query: 538 AAN--IPVLIVEHDIDRVLGFSHQVTVMNQGSVLMTGTPEQARAD 580 + + V++VE L + + V+++G ++ + AD Sbjct: 178 VSEEGMSVIVVEQHARMALSLTQRAIVLDRGRIVHASDSQSLLAD 222 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.324 0.141 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,651,969 Number of extensions: 117796 Number of successful extensions: 1410 Number of sequences better than 1.0e-08: 145 Number of HSP's gapped: 922 Number of HSP's successfully gapped: 268 Length of query: 843 Length of database: 1,619,870 Length adjustment: 93 Effective length of query: 750 Effective length of database: 1,179,515 Effective search space: 884636250 Effective search space used: 884636250 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.5 bits) S2: 135 (56.6 bits)