BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3240.p
         (280 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312578|ref|YP_003776670.1| PHP family metal-dependent phos...   503   e-144

>gi|300312578|ref|YP_003776670.1| PHP family metal-dependent
           phosphoesterase [Herbaspirillum seropedicae SmR1]
          Length = 282

 Score =  503 bits (1295), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 249/280 (88%), Positives = 262/280 (93%)

Query: 1   MPELKFDLHCHSNVSDGLLSPEEVAARAKANGVDVWALTDHDEVGGVARARAAAHALGMK 60
           M ELKFDLHCHSNVSDGLL PE+VAARAKANGV VWALTDHDE+ GVARARAAA ALGM 
Sbjct: 3   MSELKFDLHCHSNVSDGLLPPEQVAARAKANGVGVWALTDHDEIDGVARARAAAQALGMV 62

Query: 61  HVAGVEISVTWAGHTVHVVGLRIDENNRALVEGLAATRNGRERRAREIAAALEQHGIGGA 120
           HV GVEISVTWAGHTVH+VGL+IDE N ALV+GLAATRNGRERRAREIAA LEQHG+ GA
Sbjct: 63  HVGGVEISVTWAGHTVHIVGLQIDETNPALVQGLAATRNGRERRAREIAAQLEQHGVAGA 122

Query: 121 YEGALQHVGNPDLISRTHFARYLVECGHCCDTKEVFANYLTEGKPGYVPHRWATLEEAVR 180
           YEGAL+HVGNPDLISRTHFAR++VECG CCDT+EVFANYLTEGKPGYVPHRWATLEEAVR
Sbjct: 123 YEGALKHVGNPDLISRTHFARFMVECGRCCDTREVFANYLTEGKPGYVPHRWATLEEAVR 182

Query: 181 WIRGAGGVAVIAHPGRYKYTQTQFGALFDEFRQLGGAAIEVNTGSHTPEQYQQYAQVARS 240
           WIRGAGGVAVIAHPGRYKY++TQFGA FDEFRQLGGAAIEVNTGSHTPEQYQQYAQVAR 
Sbjct: 183 WIRGAGGVAVIAHPGRYKYSETQFGAFFDEFRQLGGAAIEVNTGSHTPEQYQQYAQVARH 242

Query: 241 YGFLGSMGSDFHGPGESRLDLGELPPLPVGVKPVWHDWEL 280
           YGFL SMGSDFHGPGESR+DLG LPPLP GVKPVWHDW L
Sbjct: 243 YGFLASMGSDFHGPGESRVDLGGLPPLPQGVKPVWHDWAL 282


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.319    0.136    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 932,326
Number of extensions: 37013
Number of successful extensions: 108
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 108
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 1,619,870
Length adjustment: 84
Effective length of query: 196
Effective length of database: 1,222,130
Effective search space: 239537480
Effective search space used: 239537480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 130 (54.7 bits)