BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3098.p
         (153 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312429|ref|YP_003776521.1| rhodanese-related sulfurtransfe...   275   2e-75
gi|300311651|ref|YP_003775743.1| rhodanese-related sulfurtransfe...   100   9e-23

>gi|300312429|ref|YP_003776521.1| rhodanese-related
           sulfurtransferase [Herbaspirillum seropedicae SmR1]
          Length = 153

 Score =  275 bits (702), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 129/153 (84%), Positives = 138/153 (90%)

Query: 1   MSTQAILATATQRATEGQLPYAGAVTPQEALALIQADPAVKLVDVRTRAERDWVGVVQIP 60
           MSTQ IL+ ATQRA + QLPY GAVTP EALAL++ D  +KLVDVRTRAERDWVGVVQI 
Sbjct: 1   MSTQDILSAATQRAVDAQLPYRGAVTPAEALALLEGDSRIKLVDVRTRAERDWVGVVQIA 60

Query: 61  AAQHLAVQWNLYPEGKPNPQFLEQLREVAAPQDIVLFLCRSGVRSKHAAKLASEHGYSRC 120
            AQHLAVQWNLYPEGKPNPQFLEQLREV  P D++LFLCRSGVRSKHAAKLA+EHGY+ C
Sbjct: 61  PAQHLAVQWNLYPEGKPNPQFLEQLREVTNPDDVLLFLCRSGVRSKHAAKLATEHGYTHC 120

Query: 121 FDILEGFEGNKDAAGHRKTVEGWCKAGLPWVGA 153
           FDILEGFEGNKDAAGHRKTVEGWCKAGLPWVGA
Sbjct: 121 FDILEGFEGNKDAAGHRKTVEGWCKAGLPWVGA 153


>gi|300311651|ref|YP_003775743.1| rhodanese-related
           sulfurtransferase [Herbaspirillum seropedicae SmR1]
          Length = 168

 Score = 99.8 bits (247), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 85/146 (58%), Gaps = 6/146 (4%)

Query: 7   LATATQRATEGQLPYAGAVTPQEALALIQADPAVKLVDVRTRAERDWVGVVQIPAAQHLA 66
           LA    +A    LPYAG +TP++A AL+Q    V LVDVRT  ER +VG   +P + H+A
Sbjct: 26  LAQIRAQAIADGLPYAGGITPKQAWALVQTG-KVLLVDVRTAEERKFVG--HVPDSLHVA 82

Query: 67  VQWNLYPEGKPNPQFLEQLREVAAPQDI-VLFLCRSGVRSKHAAKLASEHGYSRCFDILE 125
             W        NP+F+ +L      +D+  L LCRSG RS  AA+ A++ G S  F++LE
Sbjct: 83  --WATGTSLSRNPRFVRELESKLGGKDVPALLLCRSGKRSAAAAEAATKAGLSCIFNVLE 140

Query: 126 GFEGNKDAAGHRKTVEGWCKAGLPWV 151
           GFEG  DAA  R   +GW   GLPWV
Sbjct: 141 GFEGELDAAQQRGKADGWRFHGLPWV 166


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.319    0.133    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 522,173
Number of extensions: 21376
Number of successful extensions: 68
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 66
Number of HSP's successfully gapped: 2
Length of query: 153
Length of database: 1,619,870
Length adjustment: 77
Effective length of query: 76
Effective length of database: 1,255,275
Effective search space: 95400900
Effective search space used: 95400900
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 126 (53.1 bits)