BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2885.p (921 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300312208|ref|YP_003776300.1| assimilatory nitrate reductase ... 1727 0.0 gi|300310808|ref|YP_003774900.1| NAD-dependent formate dehydroge... 282 8e-77 gi|300313158|ref|YP_003777250.1| anaerobic dehydrogenase family ... 129 9e-31 gi|300310774|ref|YP_003774866.1| anaerobic formate dehydrogenase... 96 2e-20 gi|300311015|ref|YP_003775107.1| anaerobic (selenocysteine-conta... 88 3e-18 >gi|300312208|ref|YP_003776300.1| assimilatory nitrate reductase large subunit [Herbaspirillum seropedicae SmR1] Length = 922 Score = 1727 bits (4474), Expect = 0.0, Method: Compositional matrix adjust. Identities = 823/921 (89%), Positives = 879/921 (95%) Query: 1 MNLSQTPLALTVATTRSTCPYCGVGCGVTASMQQDGSLGIKGDEQHPANFGRLCVKGSAL 60 MNLSQTPLAL VATT +TCPYCGVGCGV+ASM+ DG +GI+GD QHPANFGRLCVKGSAL Sbjct: 1 MNLSQTPLALAVATTSTTCPYCGVGCGVSASMKDDGRIGIQGDAQHPANFGRLCVKGSAL 60 Query: 61 GETVDLEGRLLHPQVRDAQGALQQVSWDVALEQVAGKFSSIIAEHGPNAVALYVSGQLLT 120 GETVDL+GRLLHPQ+RDAQG LQQ++WD AL+ VA KFS+IIAEHGP+AVALYVSGQLLT Sbjct: 61 GETVDLDGRLLHPQLRDAQGQLQQLAWDQALDHVASKFSAIIAEHGPDAVALYVSGQLLT 120 Query: 121 EDYYIANKLMKGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLIVLVG 180 EDYYIANKLMKGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADL+VLVG Sbjct: 121 EDYYIANKLMKGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLVVLVG 180 Query: 181 ANAAWCHPILFQRIAKLKETRPALRLIVIDPRRTATCELADLHLPIKAGTDVWLFNGLMS 240 +NAAWCHPILFQRIA+LKETRPALRL+VIDPRRTATCELADLHLPIK GTDVWLFNGLMS Sbjct: 181 SNAAWCHPILFQRIARLKETRPALRLVVIDPRRTATCELADLHLPIKPGTDVWLFNGLMS 240 Query: 241 YLAHRGLRDNAFIAAHTNGFDEALAVADADCADPATVARLCKVDLQDLLAFYQAFAETDK 300 YLAHRGLRDNAFI AHT GFDEALAVADADCADPATVARLCK+DL+DLLAFY+AFA T+K Sbjct: 241 YLAHRGLRDNAFIEAHTKGFDEALAVADADCADPATVARLCKIDLKDLLAFYEAFANTEK 300 Query: 301 VVTGFSMGVNQSSVGSDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLANM 360 VVTGFSMGVNQSS G+DKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLANM Sbjct: 301 VVTGFSMGVNQSSAGTDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLANM 360 Query: 361 LAAHMDLEQPLHREIVQEFWQSPRMADQPGLKAVDMFRAIEEGRIKAVWIIATNPLVSLP 420 LAAHMDL+QPLHR+IVQ+FWQSPR+AD+PGLKAVDMFRAIEEGRIKAVWI+ATNP+VSLP Sbjct: 361 LAAHMDLDQPLHRQIVQDFWQSPRIADKPGLKAVDMFRAIEEGRIKAVWIMATNPMVSLP 420 Query: 421 DADLVQRALQKCELVVSSDVIAQTDTNAYAHVLLPALAWGEKDGTVTNSERRISRQRAFL 480 DADLVQRALQKCELVVSSDVI QTDTNA AHVLLPALAWGEKDGTVTNSERRISRQRAFL Sbjct: 421 DADLVQRALQKCELVVSSDVITQTDTNALAHVLLPALAWGEKDGTVTNSERRISRQRAFL 480 Query: 481 SAPGQARGDWRILCEVAQRMGFTGFDFDGPHAIFDEHARLSAYRNGQADAGQVRRVFNLA 540 SAPG+ARGDWRI+C+VA+RMGF GFDF GPH IFDEHARLSA+RNG+ADA +VRRVFNLA Sbjct: 481 SAPGEARGDWRIICDVARRMGFDGFDFAGPHEIFDEHARLSAHRNGEADASRVRRVFNLA 540 Query: 541 GLTGLDRASYDALAPIQWPVQRLSDGSINGTARVLQDLRFSHPDGRARFIPTAPRSPGHA 600 GLTG+DRA+YDALAPIQWPVQRLSDGS++GTARVL+D RFSH DGRARF+PTAPRS HA Sbjct: 541 GLTGMDRAAYDALAPIQWPVQRLSDGSVSGTARVLEDHRFSHADGRARFVPTAPRSAAHA 600 Query: 601 PCEDYPLILNTGRVRDHWHTMTRTGKSATLASHIPESFIDIHPQDALLYGVREGGLARIS 660 CEDYPLILNTGRVRDHWHTMTRTG+SATLASHIPESFIDIHPQDALLYGVREGGLARIS Sbjct: 601 ACEDYPLILNTGRVRDHWHTMTRTGRSATLASHIPESFIDIHPQDALLYGVREGGLARIS 660 Query: 661 SRWGAMVARVQHGGGIPRGALFVPIHWNGQSASDARVGAVVNPVVDPVSGEPEFKHTPVA 720 SRWGAMVARVQHGGGI RG++FVPIHWNGQSASDARVGAVVNPVVDPVSGEPEFKHTPVA Sbjct: 661 SRWGAMVARVQHGGGIARGSVFVPIHWNGQSASDARVGAVVNPVVDPVSGEPEFKHTPVA 720 Query: 721 IEEFRVGWHGFILTRHALVLDDITHWTRVQGRDFVRYELAGRNQINDHTAWARALLGVQD 780 IEEFRV WHGFILTRHAL LD +THWTRVQGRDF+RYELAGRN I DH+AWAR+LLGVQD Sbjct: 721 IEEFRVSWHGFILTRHALDLDQVTHWTRVQGRDFMRYELAGRNHIPDHSAWARSLLGVQD 780 Query: 781 ADADWLEYEDLSDGSYRAVHVVEDRIDMCLFMSARPDLPSRSWLAGLFAKDKLEDADRVG 840 ADWLEYEDLSDGSYRAVHVVEDRIDMCLFMSARPDLPSRSWLAGLFAK+KLE+ADRVG Sbjct: 781 PQADWLEYEDLSDGSYRAVHVVEDRIDMCLFMSARPDLPSRSWLAGLFAKEKLEEADRVG 840 Query: 841 LLVGQPIEKGADTGPTVCSCFGVGRNTICRAIKEQGLQEVSQVTACLKAGGNCGSCVPEI 900 LLVGQPIEKGADTGPTVCSCFGVGRNTIC AI+ QGL EV QVTACLKAGGNCGSCVPEI Sbjct: 841 LLVGQPIEKGADTGPTVCSCFGVGRNTICNAIRTQGLSEVGQVTACLKAGGNCGSCVPEI 900 Query: 901 KKLLVEIKVLAAAEEREDVQA 921 KKL+VE+++ AAE RE +A Sbjct: 901 KKLIVEVRLQDAAELREGAKA 921 >gi|300310808|ref|YP_003774900.1| NAD-dependent formate dehydrogenase subunit alpha [Herbaspirillum seropedicae SmR1] Length = 957 Score = 282 bits (722), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 199/712 (27%), Positives = 329/712 (46%), Gaps = 43/712 (6%) Query: 17 STCPYCGVGCGVTASMQQDGSLGIKGDEQHPANFGRLCVKGSALGETVDLEGRLLHPQVR 76 +TC YCGVGC A M+ + + + + AN G CVKG + R+L+P +R Sbjct: 246 TTCAYCGVGCSFKAEMKGNEVVRMVPYKDGKANQGHSCVKGRFAWGYATHKDRILNPMIR 305 Query: 77 DA-QGALQQVSWDVALEQVAGKFSSIIAEHGPNAVALYVSGQLLTEDYYIANKLMKGYIG 135 + ++VSW+ AL A +F I A+HG +++ S + E+ Y+ KL++ G Sbjct: 306 KSINDPWREVSWEEALSYAASEFRRIQAKHGKDSIGGITSSRCTNEETYLVQKLVRAAFG 365 Query: 136 SANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLIVLVGANAAWCHPILFQRIA 195 + N+DT +R+C S G K+ GE +E + +D+I+++GAN A HP+ +I Sbjct: 366 NNNVDTCARVCHSPTGYGLKQTLGESAGTQTFESVMKSDVILIMGANPAAGHPVFASQIK 425 Query: 196 KLKETRPALRLIVIDPRRTATCE----LADLHLPIKAGTDVWLFNGLMSYLAHRGLRDNA 251 + R +LIVIDPR T + AD HL ++ GT+ + L + GL+D A Sbjct: 426 --RRVRQGAKLIVIDPRTTEMVKSPHIQADYHLKLRPGTNTAIITALAHVILSEGLQDEA 483 Query: 252 FIAAHTN--GFDEALAVADADCADPATVARLCKVDLQDLLAFYQAFAETDKVVTGFSMGV 309 +I + + + + P +A + V + + + +A + +GV Sbjct: 484 YIQERCDLQSYQDWKEFVLREDNSPEAMAAITGVPAEIIRGAARLYATGGNAAIYYGLGV 543 Query: 310 NQSSVGSDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLANMLAAHMDLEQ 369 + + GS V I N + TG +G+ G+G + GQ N G ++G + L + + Sbjct: 544 TEHAQGSTTVMGIANLAMCTGNVGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHISD 603 Query: 370 PLHREIVQEFWQSPRMADQPGLKAVDMFRAIEEGRIKAVWIIATNPLVSLPDADLVQRAL 429 R ++ W + +PGL+ +MF A +G K ++ + + S P+ V AL Sbjct: 604 STVRNQFEQAW-GVTLNPEPGLRIPNMFDAALDGSFKGLYCEGEDIVQSDPNTQHVAAAL 662 Query: 430 QKCELVVSSDVIAQTDTNAYAHVLLPALAWGEKDGTVTNSERRISRQRAFLSAPGQARGD 489 Q E +V D+ +T YAHV LP ++ EKDGT TN+ERRISR R + P + D Sbjct: 663 QAMECIVVQDLFLN-ETAKYAHVFLPGSSFLEKDGTFTNAERRISRVRKVM-PPKAGKSD 720 Query: 490 WRILCEVAQRMGFTGFDFDGPHAIFDEHARLSAYRNGQADAGQVRRVFNLAGLTGLDRAS 549 W + +A+ +G+ ++ P I DE A L+ G+ Sbjct: 721 WEVTVALAEALGYP-MPYNHPSEIMDEIAALT------------------PSFHGVSYDK 761 Query: 550 YDALAPIQWPVQRLSDGSINGTARVLQDLRFSHPDGRARFIPTAPRSPGHAPCEDYPLIL 609 + L IQWP ++ + GT ++ F G+ +FI T + + YPLIL Sbjct: 762 LEKLGSIQWPC---NESAPEGTP-IMHVGSFIR--GKGKFINTQYFATDEKVTQRYPLIL 815 Query: 610 NTGRVRDHWHTMTRTGKSATLASHIPESFIDIHPQDALLYGVREGGLARISSRWGAMVAR 669 TGR+ ++ +T ++ H E ++IHP DA G+REG + SR G V R Sbjct: 816 TTGRILSQYNVGAQTRRTENSQWH-SEDRLEIHPHDAEDRGIREGDWVGVESRAGQTVLR 874 Query: 670 VQHGGGIPRGALFVPIHWNGQSASDARVGAVVNPVVDPVSGEPEFKHTPVAI 721 + G ++ H+ A+ + D + PE+K T V + Sbjct: 875 ATVTEKVQPGVVYTTFHFPESGAN-----VITTDNSDWATNCPEYKVTAVQV 921 >gi|300313158|ref|YP_003777250.1| anaerobic dehydrogenase family protein [Herbaspirillum seropedicae SmR1] Length = 701 Score = 129 bits (325), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 174/745 (23%), Positives = 293/745 (39%), Gaps = 82/745 (11%) Query: 10 LTVATTRSTCPY-CGVGCGVTASMQQDGSLGIKGDEQHPANFGRLCVKGSALGETVDLEG 68 +T R+ CP+ C C + +++ + ++GD HP G LC K S E Sbjct: 1 MTTTIVRAACPHDCPDTCALLVTVKDGVATEVRGDPAHPPTAGVLCTKVSRYAERTYHPD 60 Query: 69 RLLHPQVR---DAQGALQQVSWDVALEQVAGKFSSIIAEHGPNAVALY----VSGQLLTE 121 RLLHP R +G +++SWD A+ +A + I A P A+ Y GQ+ E Sbjct: 61 RLLHPMRRVGKKGEGKFERISWDEAIATIAQRLGQI-ALRDPQAILPYSYAGTMGQVQGE 119 Query: 122 DYYIANKLMKGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLIVLVGA 181 +A + +G++ ++ +C S+ AG++ G V E ++ A LI++ G Sbjct: 120 S--MAGRFFH-RLGASQLERT--ICASAGGAGYRYTIGAR-VGADLEQVDHAKLILIWGG 173 Query: 182 NAAWCHPILFQRIAKLKETRPALRLIVIDPRRTATCELADLHLPIKAGTDVWLFNGLMSY 241 N + + R+ K R RLI IDP R+ T E H+ + GTD L G+M Sbjct: 174 NPIASNLHFWTRVQTAK--RNGARLIAIDPYRSLTAEKCHQHIALLPGTDAALALGMMHV 231 Query: 242 LAHRGLRDNAFIAAHTNGFDEALAVADADCADPATVARLCKVDLQDLLAFYQAFAETDKV 301 L L D+ +IA HT GF E L A+ PA A +C + +++L + + Sbjct: 232 LISEDLLDHDYIARHTLGF-EQLRERVAEWT-PARTAEVCGISAEEVLNLAREYGRVALA 289 Query: 302 VTGFSMGVN---QSSVGSDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLA 358 G + N Q G + C A + G ++ + Sbjct: 290 GEGVFIRANYGLQRVRGGGMAARNVACLPALVGAWRHPAGGVQMSVSDSFPKDAAALSRP 349 Query: 359 NMLAAHMDLEQPLHREIVQEFWQSPRMADQPGLKAVDMFRAIEEGRIKAVWIIATNPLVS 418 ++ A H + ++ + + P AD +++A+ + +NP+ Sbjct: 350 DLAAGHGKPARVINMSTIGDALLHPASAD-------------FGPKVEALIVYNSNPVAV 396 Query: 419 LPDADLVQRALQKCELVVSSDVIAQTDTNAYAHVLLPALAWGEK-DGTVTNSERRISRQR 477 P++ V + + +L QTDT YA +LLPA E D + I Sbjct: 397 APESAKVAQGFAREDLFTVVLEHFQTDTADYADILLPATTQLEHIDVHASYGHVYIMANN 456 Query: 478 AFLSAPGQARGDWRILCEVAQRMGFTGFDFDGPHAIFDEHARLSAYRNGQADAGQVRRVF 537 A ++ G+A+ + I +A MGFT F D+ A ++ R+ AG Sbjct: 457 AAIAPMGEAKPNTEIFRRLAAAMGFTEDCFQDSD---DQLAAVAFKRDDPRSAGY----- 508 Query: 538 NLAGLTGLDRASYDALAPIQWPVQRLSDGSINGTARVLQDLRFSHPDGRARFIPTAPRSP 597 L + + LA PV ++G F+ P G+ F ++ Sbjct: 509 ---DWEQLKQKGWQRLA---VPVAPFAEGG------------FATPSGKCEFYSEQMKAA 550 Query: 598 GHAP-----------------CEDYPLILNTGRVRDHWHTMTRTGKSATLASHIPESFID 640 G P YPL + + R+ ++ +S L E +D Sbjct: 551 GLDPLPAYIPPYESVASNPQLAARYPLAMISPPARNFLNSSFVNVQS--LRDTEGEPHLD 608 Query: 641 IHPQDALLYGVREGGLARISSRWGAMVARVQHGGGIPRGALF-VPIHWNGQSASDARVGA 699 +HPQDA G+ +G + RI + G++ ARV+ G + + I W +A Sbjct: 609 MHPQDAAARGISQGDMVRIFNDRGSLQARVRVTDKARVGLVVGLSIWWKKFAADGKNANE 668 Query: 700 VVNPVVDPVSGEPEFKHTPVAIEEF 724 V + + + P F V +E+ Sbjct: 669 VTSQRLTDMGHAPTFYDVLVQVEKL 693 >gi|300310774|ref|YP_003774866.1| anaerobic formate dehydrogenase [Herbaspirillum seropedicae SmR1] Length = 790 Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 110/438 (25%), Positives = 173/438 (39%), Gaps = 61/438 (13%) Query: 65 DLE----GRLLHPQVRDAQG-ALQQVSWDVALEQVAGKFSSIIAEHGPNAVALYVSGQLL 119 DLE GR+ P DA VSW A + +A + ++ P V Y SG+ Sbjct: 124 DLELESSGRVTEPMKYDAASDRYLPVSWSEAFDDIAAQLRAM----DPKKVVFYASGRAS 179 Query: 120 TEDYYIANKLMKGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLIVLV 179 E Y+ +LM G+ N+ +S +C S + G + V +D D I+ Sbjct: 180 LETSYLY-QLMARMYGTNNLPDSSNMCHESTSVALPQTIGVPVGTVTLDDFGQTDCILFF 238 Query: 180 GANAAWCHPILFQRIAKLKETRPALRLIVIDPRRT------------------ATCELAD 221 G N P + + ++++ + +I +P R A +++ Sbjct: 239 GHNTGTNAPRMLHPLEEVRKR--GVPVITFNPLRERGLERFVNPQSPKEMVTPAHTDIST 296 Query: 222 LHLPIKAGTDVWLFNGLMSYLAHRG----------LRDNAFIAAHTNGFDEALAVADADC 271 +L IK G D G+ + R L D AFI HT+GF++ ADA Sbjct: 297 QYLQIKIGGDSAAAIGMAKRILERDDKARQEGLPRLLDLAFIEEHTSGFEQ---FADAVR 353 Query: 272 ADP-ATVARLCKVDLQDLLAFYQAFAETDKVVTGFSMGVNQSSVGSDKVNSIINCHLATG 330 A P + R V +L +A + + + MGV Q ++ + N L G Sbjct: 354 AAPWDELERHAGVSRAELELAADTYAGAGRAMLMYGMGVTQHREAVRTIHMLTNLLLMRG 413 Query: 331 RIGKPGMGPFSITGQPNAMGGREVGGLAN-MLAAHMDLEQPLHREIVQEFWQSPRMADQP 389 IGKPG G I G N G R VG L + L H E P M + Sbjct: 414 NIGKPGAGICPIRGHSNVQGQRTVGITEKPELVPNDKLRALYHFE--------PPM--EK 463 Query: 390 GLKAVDMFRAIEEGRIKAVWIIATNPLVSLPDADLVQRALQKCELVVSSDVIAQTDTNAY 449 GL V+ I +G + A +++ N + ++PD +++ A +K L V V+ + + Sbjct: 464 GLNTVEACEKIRDGELSAFFMLGGNFVRAIPDHGVMEAAWRKLPLTVQ--VVTHFNRSCV 521 Query: 450 AH----VLLPALAWGEKD 463 H +LP L E D Sbjct: 522 IHGQTSYVLPCLGRIEID 539 >gi|300311015|ref|YP_003775107.1| anaerobic (selenocysteine-containing) formate dehydrogenase [Herbaspirillum seropedicae SmR1] Length = 775 Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 100/431 (23%), Positives = 166/431 (38%), Gaps = 56/431 (12%) Query: 68 GRLLHPQVRDA-QGALQQVSWDVALEQVAGKFSSIIAEHGPNAVALYVSGQLLTEDYYIA 126 GRL HP V DA +++ W A +A +++ P+ YVSG+ E ++ Sbjct: 110 GRLTHPMVYDAATDKYKKIEWADAFALMAKHLNALP---DPDMADFYVSGRASNEAAFLF 166 Query: 127 NKLMKGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLIVLVGANAAWC 186 ++ Y G+ N S +C G G V ED + D ++L G N A Sbjct: 167 QLFVRQY-GTNNFPDCSNMCHEPTSVGLPGTVGIGKGTVLLEDFDHCDTLLLFGQNPATN 225 Query: 187 HPILFQRIAKLKETRPALRLIVIDPRRTATCE------------------LADLHLPIKA 228 HP + + ++ ++ I+P + E ++ + + Sbjct: 226 HPRMMGELRH--ASKRGATIVAINPLKERGLERFADPQSKVEMLTMGSTRISSMFIHPTL 283 Query: 229 GTDVWLFNGLMSYL-----------AHRGLRDNAFIAAHTNGFDEALAVADADCADPATV 277 G D+ L G++ A R + D FI HT GF+E A A A+ D + Sbjct: 284 GGDLALIKGVIKRTIELDDAARAAGAERVI-DVKFIEEHTAGFEEFAAQARAESWD--DI 340 Query: 278 ARLCKVDLQDLLAFYQAFAETDKVVTGFSMGVNQSSVGSDKVNSIINCHLATGRIGKPGM 337 V +D+ Q + + V+ + MG+ Q + + N + G IG+ G Sbjct: 341 VAESGVSREDIEKLAQVYVKGKAVIATWGMGLTQHKHAVATIQLLSNMMMLRGNIGRQGA 400 Query: 338 GPFSITGQPNAMGGREVGGLANMLAAHMD-LEQPLHREIVQEFWQSPRMADQPGLKAVDM 396 G + G N G R VG A +D LEQ +++PR G V Sbjct: 401 GLCPVRGHSNVQGDRTVGIDEKPTPAFLDRLEQVFG-------FKAPR---HHGNDTVGS 450 Query: 397 FRAIEEGRIKAVWIIATNPLVSLPDADLVQRALQKCELVVSSDVIAQTDTNAYAH----V 452 A+ EGR K + N ++ PD A++ C L V + + + + H + Sbjct: 451 VMAMLEGRTKVFIGLGGNFAMATPDTPRTFEAMRSCNLTVH--ITTKLNRSHLVHGKDAL 508 Query: 453 LLPALAWGEKD 463 +LP + E D Sbjct: 509 ILPTMGRTEID 519 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.321 0.136 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 3,095,496 Number of extensions: 141282 Number of successful extensions: 397 Number of sequences better than 1.0e-08: 5 Number of HSP's gapped: 386 Number of HSP's successfully gapped: 5 Length of query: 921 Length of database: 1,619,870 Length adjustment: 94 Effective length of query: 827 Effective length of database: 1,174,780 Effective search space: 971543060 Effective search space used: 971543060 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 135 (56.6 bits)