BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2857.p (1112 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300312190|ref|YP_003776282.1| hemolysin-type calcium binding ... 947 0.0 gi|300312186|ref|YP_003776278.1| calcium binding secreted hemoly... 655 0.0 gi|300312185|ref|YP_003776277.1| calcium binding secreted hemoly... 632 0.0 gi|300311899|ref|YP_003775991.1| hemolysin-type calcium binding ... 543 e-155 >gi|300312190|ref|YP_003776282.1| hemolysin-type calcium binding protein [Herbaspirillum seropedicae SmR1] Length = 1139 Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/711 (66%), Positives = 569/711 (80%), Gaps = 3/711 (0%) Query: 402 GDDVINGSKGDDILWGGDGKDLLWGKEGDDQLYGENGDDQLVGAEGNDLLSGGAGADRIF 461 G D + G+ GDD LWGG G D L+G+EG+D+L+GE+GDDQL+G EG DLL GGAG D++F Sbjct: 432 GKDTLVGTTGDDTLWGGAGNDTLFGREGNDRLFGEDGDDQLLGGEGFDLLDGGAGDDQLF 491 Query: 462 AGLGNDRIWGGDGDDDLYGNDLKAGVTKGLEPGQTDDDQIVGGAGNDSISGGLGNDQLWG 521 GLGND++WGGDGDD + G+D+ + + L GQTDDD + GGAG D + GG GNDQ+WG Sbjct: 492 GGLGNDQMWGGDGDDTMMGSDV-SNTGRPLPAGQTDDDIMFGGAGKDGMFGGAGNDQMWG 550 Query: 522 GIGNDSLYGEEGDDKLDGEAGNDRLYGGAGNDVLQGGDGDDVLYGDYMRAYAAATNDIGG 581 G G+D LYG EGDDKL GEAGND +YGG GNDV+QGGDGDD++YGD M + + GG Sbjct: 551 GDGDDGLYGNEGDDKLYGEAGNDHIYGGKGNDVIQGGDGDDLIYGDDMEYFWMQPDTTGG 610 Query: 582 DDLIYGGAGNDSLYGSVGNDLLDGGSGNDYLEGGKGDDTYLVDCSGDTVVENANEGHDTV 641 DDL+YGGAGNDSL+G GND+LDGGSGND L GG GDDTY+VD +GDT+ E+A++GHDTV Sbjct: 611 DDLLYGGAGNDSLFGGSGNDVLDGGSGNDSLVGGLGDDTYVVDGAGDTIREDADQGHDTV 670 Query: 642 VASCSLTLATHVEDLHLAEGGNFNGSGNTLNNLITGNSQDNLLDGGQGADTLIGGKGNDT 701 VASCS TL ++EDL LAEGG FNG+GN +NLITGNSQDN+LDGG+GADTL+GG GND+ Sbjct: 671 VASCSYTLGRNLEDLRLAEGGQFNGTGNAQDNLITGNSQDNILDGGRGADTLMGGTGNDS 730 Query: 702 YVVDDIGDKVVEQAGEGIDSVQSKISYTLGDNLENLSLMDSTSAQAQTINGKAALVYGFP 761 Y VDD+ DKVVEQAGEG+D+V S+IS TLG NLENL+L+DS + Q + +NG+ LVYG+P Sbjct: 731 YFVDDVNDKVVEQAGEGVDTVFSRISTTLGANLENLTLLDSATPQHEIVNGRDMLVYGYP 790 Query: 762 HNYDLDYSQGDEVPGYKGTCGETSVANICIMSGLQETEADVVKRAIANGWCRTQAATDET 821 H +LDYSQGD V GY GTCGETSV N+C+M+GL TEA VKRAIANGWC T + Sbjct: 791 HYAELDYSQGDAVAGYTGTCGETSVVNLCLMAGLAVTEAQAVKRAIANGWCVTSG--ESQ 848 Query: 822 RGGCNQYDQMNLLKSFGLPSDCSYGYDQAKLAGLLKDGRGVLIAVNAGKLWDDPDYVQGG 881 GG NQYDQ+ LL S+G+ + YGYD+ L +LK+GRG L++VNAGKLWD+P VQ G Sbjct: 849 LGGSNQYDQVALLASYGIRAKAGYGYDEKALVKVLKEGRGALVSVNAGKLWDNPGAVQLG 908 Query: 882 VLNHVVTVTGVACDASSGDVLGFYIADSGRGQTADANRYLSADDMRKVADAYGANMVYTL 941 NHV+TVTGV CD +G+ GF+IADSGRG+ DA RYLS D++RKVAD MV T+ Sbjct: 909 NGNHVITVTGVVCDPGTGEAQGFFIADSGRGRPEDACRYLSKDELRKVADVTDGYMVATV 968 Query: 942 DPIKIRNENIDATGNALDNVLTGNRGNNILTGGRGDDTLIGGAGNDTYVFTRGDGRDQII 1001 DPIK+ NEN+DATGN LDNV+TGNRG N++ GGRG+DTLIGGAGNDTYVF RGDG+D I Sbjct: 969 DPIKVPNENLDATGNELDNVITGNRGANVIRGGRGNDTLIGGAGNDTYVFARGDGQDVIA 1028 Query: 1002 DNDTTRGNQDVLQFKDAKQTNLWFSQAGQDLQIDVLGSSDRVTVKDWYVGGKSGTDRHVE 1061 D D TRGN D LQ D +QTNLWFSQ+G DL+IDVLG +DR+T+KDWY GG SG+D H+E Sbjct: 1029 DQDATRGNIDTLQLSDLRQTNLWFSQSGNDLRIDVLGGNDRITIKDWYQGGSSGSDNHIE 1088 Query: 1062 RIKTADGATLYDSDVEQLVQAMASFAPPAALQTEWTSGQTSAGKVLLTVTH 1112 RI+TADG TLYDSDV++LVQAMASFAPP ALQ+EWT GQTS GKVLLTVTH Sbjct: 1089 RIRTADGNTLYDSDVDKLVQAMASFAPPPALQSEWTPGQTSQGKVLLTVTH 1139 Score = 185 bits (469), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 244/815 (29%), Positives = 327/815 (40%), Gaps = 204/815 (25%) Query: 1 MTITIAPNRMTALASAPSARTTSSSSTRKADAASVTSTTRV----------TSTSAVAVD 50 M ITI NRM+ LASA + S + + A R + A Sbjct: 1 MAITITINRMSTLASAKAYVPGGSGAAQHDAAERREGLVRAGPLALWLQGNRWHAVAAAQ 60 Query: 51 GITSTDAFDGGK-YSLAEGRAS----SLAPSHHARSQRRDQAQRSHPQRTEAGSGPAPQP 105 GIT T AF + +S A R S P Q R + + P + Sbjct: 61 GITPTAAFLPWQGWSAARWRTFQPIISCCPVRRPVVQARHELAVNKPHQQSL-------- 112 Query: 106 PLVMASSSADLADAAQLSQAVVSQHTAAQDLLAATVNEQAARVDVLAPMDQGVLQLLSSA 165 P+ +AS +A ++ AA S S A + E A + L D +++SA Sbjct: 113 PVALASPAAPMSVAAAASGQSASVAATPS---AKSAQESAPTIKRLRAEDA---MVVTSA 166 Query: 166 PSAAASASSATVTPGP--QPILPALPSLTPAVAAAPPQPVPCPPSTPSAPATSCPSPTPY 223 P+ A+ P + PA P + AA PP P TPS P Sbjct: 167 PACPATQDCLLPIAAPLRSAVQPADPGGSGKAAANPPSICPVVNVTPS--------PCDQ 218 Query: 224 QAPCW----TTDLVPLAEAFPPDVQITLSDCVPVPVSSLV-------------------- 259 W T++ VPL+EAFPP VQI++SDCVPVP+S+L+ Sbjct: 219 TETVWVLPGTSECVPLSEAFPPGVQISVSDCVPVPLSTLIKRLFPDLIIKPSPSASSPTP 278 Query: 260 -------------------PSKDVPGFASVPVPKPAPAVTPVVPPKPAPSSAPVPA---- 296 P+ G A+V P APA PV+ P AP SAP A Sbjct: 279 AATPAPAPSPVVSTAPVATPTVAPAGGATV-TPVIAPASKPVIAPISAPVSAPASAPTVT 337 Query: 297 ----------------VAPAVSLAVTPSL------------------------------- 309 VAP+V+ A TP + Sbjct: 338 PSATPAPTPAPASTPSVAPSVAPATTPPVASPVTPAAAPAPAAVVPAAATPVPATAAVAV 397 Query: 310 -----YVAPPAAVYV------PAPEEPAIPDSN-----FRSLRDDDNAFHLNGGRTINFA 353 ++ P AV V P P+ PA N DD + G T+ F Sbjct: 398 KPLAALISIPEAVPVASLAPPPIPQRPAGSKDNSGKDTLVGTTGDDTLWGGAGNDTL-FG 456 Query: 354 PNQIKALNSQPG--CLIGTDGNDLLDPNLGTSNYNVNVQAGPFRQLAGGGGDDVINGS-- 409 L + G L+G +G DLLD G + Q+ GG GDD + GS Sbjct: 457 REGNDRLFGEDGDDQLLGGEGFDLLDGGAGDDQLFGGLGN---DQMWGGDGDDTMMGSDV 513 Query: 410 -----------KGDDILWGGDGKDLLWGKEGD---------DQLYGENGDDQLVGAEGND 449 DDI++GG GKD ++G G+ D LYG GDD+L G GN Sbjct: 514 SNTGRPLPAGQTDDDIMFGGAGKDGMFGGAGNDQMWGGDGDDGLYGNEGDDKLYGEAGN- 572 Query: 450 LLSGGAGADRIFAGLGNDRIWGGDGDDDLYGNDLKAGVTKGLEPGQT-DDDQIVGGAGND 508 D I+ G GND I GGDGDD +YG+D++ ++P T DD + GGAGND Sbjct: 573 --------DHIYGGKGNDVIQGGDGDDLIYGDDME---YFWMQPDTTGGDDLLYGGAGND 621 Query: 509 SISGGLGNDQLWGGIGNDSLYGEEGDDKLDGEAGNDRLYGGAGNDVLQGGD-GDDVLYGD 567 S+ GG GND L GG GNDSL G GDD + GAG+ + + D G D + Sbjct: 622 SLFGGSGNDVLDGGSGNDSLVGGLGDDTY--------VVDGAGDTIREDADQGHDTVVAS 673 Query: 568 YMRAYAAATNDI----GGDDLIYGGAGNDSLYGSVGNDLLDGGSGNDYLEGGKGDDTYLV 623 D+ GG G A ++ + G+ +++LDGG G D L GG G+D+Y V Sbjct: 674 CSYTLGRNLEDLRLAEGGQFNGTGNAQDNLITGNSQDNILDGGRGADTLMGGTGNDSYFV 733 Query: 624 DCSGDTVVENANEGHDTVVASCSLTLATHVEDLHL 658 D D VVE A EG DTV + S TL ++E+L L Sbjct: 734 DDVNDKVVEQAGEGVDTVFSRISTTLGANLENLTL 768 >gi|300312186|ref|YP_003776278.1| calcium binding secreted hemolysin protein [Herbaspirillum seropedicae SmR1] Length = 1080 Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/536 (60%), Positives = 402/536 (75%), Gaps = 10/536 (1%) Query: 581 GDDLIYGGAGNDSLYGSVGNDLLDGGSGNDYLEGGKGDDTYLVDCSGDTVVENANEGHDT 640 G+D ++GG G D L+G GND+LDGG G D L GG GDDTY+V+ S D VVE N GHDT Sbjct: 551 GEDSLHGGDGKDWLFGFDGNDVLDGGLGADTLYGGDGDDTYIVNSSDDRVVETINGGHDT 610 Query: 641 VVASCSLTLATHVEDLHLAEGGNFNGSGNTLNNLITGNSQDNLLDGGQGADTLIGGKGND 700 V+ASCS LA +VEDL L EGGN NG+GNTL+NLI GN QDN+LDGG GADT+IGG GND Sbjct: 611 VIASCSTILAANVEDLRLVEGGNLNGAGNTLDNLIVGNGQDNILDGGVGADTMIGGLGND 670 Query: 701 TYVVDDIGDKVVEQAGEGIDSVQSKISYTLGDNLENLSLMDSTSAQAQTINGKAALVYGF 760 +Y VDD GD+V E A EG+D+V S+IS L N+ENL+L+D + T+ GKAAL+YG Sbjct: 671 SYFVDDAGDQVTEAADEGVDTVYSRISMRLAANVENLTLLDGGTPLRGTVEGKAALIYGA 730 Query: 761 PHNYDLDYSQGDEVPGYKGTCGETSVANICIMSGLQETEADVVKRAIANGWCRTQAATDE 820 P YDLDY QG+ V GY GTCGETSV N+ M+ +E +VV+RAI WC T A + Sbjct: 731 PKAYDLDYQQGNGVTGYDGTCGETSVVNVLRMADQWVSEKEVVQRAIDKKWCITDAPSAS 790 Query: 821 TRGGCNQYDQMNLLKSFGLPSDCSYGYDQAKLAGLLKDGRGVLIAVNAGKLWDDPDYVQG 880 +GG + DQ LL+S+GL ++ + YDQ KLA L+K+GRGV+++V++ +LW G Sbjct: 791 AKGGSSALDQKRLLESYGLRAEYTLKYDQDKLAALVKEGRGVMVSVDSRRLW------SG 844 Query: 881 G----VLNHVVTVTGVACDASSGDVLGFYIADSGRGQTADANRYLSADDMRKVADAYGAN 936 G +HVVTVTGVA A G+++GFYIADSGRG DA RY+SAD++R +AD GA+ Sbjct: 845 GKGLNFTDHVVTVTGVAYAAEKGELIGFYIADSGRGLAEDATRYVSADELRAMADVRGAS 904 Query: 937 MVYTLDPIKIRNENIDATGNALDNVLTGNRGNNILTGGRGDDTLIGGAGNDTYVFTRGDG 996 MVYTLDPIK+R +N++ATGN LDN L GNRG+N++TG +G+DTL+G AGNDTYVF +GDG Sbjct: 905 MVYTLDPIKLRQQNLEATGNELDNHLVGNRGDNLITGAKGNDTLVGQAGNDTYVFGKGDG 964 Query: 997 RDQIIDNDTTRGNQDVLQFKDAKQTNLWFSQAGQDLQIDVLGSSDRVTVKDWYVGGKSGT 1056 RD + D+D T GN D ++F DA+QTNLWF Q GQDLQIDVLG++D+VTVKDWYVGG SGT Sbjct: 965 RDLVADHDATAGNIDTIKFSDARQTNLWFRQVGQDLQIDVLGTTDQVTVKDWYVGGDSGT 1024 Query: 1057 DRHVERIKTADGATLYDSDVEQLVQAMASFAPPAALQTEWTSGQTSAGKVLLTVTH 1112 D +ERIKTADG TLYDSDV++LVQAMASFAPP A QT W GQ G VLLTV H Sbjct: 1025 DNRIERIKTADGKTLYDSDVDRLVQAMASFAPPPATQTSWRDGQQEKGAVLLTVNH 1080 Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 105/295 (35%), Positives = 142/295 (48%), Gaps = 41/295 (13%) Query: 503 GGAGNDSISGGLGNDQLWGGIGNDSLYGEEGDDKLDGEAGNDRLYGGAGND--VLQGGD- 559 G AG+D + G G D L GG G D L+G +G+D LDG G D LYGG G+D ++ D Sbjct: 539 GTAGDDQLLGSTGEDSLHGGDGKDWLFGFDGNDVLDGGLGADTLYGGDGDDTYIVNSSDD 598 Query: 560 --------GDDVLYGDYMRAYAAATNDIGGDDLIYG----GAGN--DSLYGSVGND-LLD 604 G D + AA D+ L+ G GAGN D+L G D +LD Sbjct: 599 RVVETINGGHDTVIASCSTILAANVEDL---RLVEGGNLNGAGNTLDNLIVGNGQDNILD 655 Query: 605 GGSGNDYLEGGKGDDTYLVDCSGDTVVENANEGHDTVVASCSLTLATHVEDLHLAEGGN- 663 GG G D + GG G+D+Y VD +GD V E A+EG DTV + S+ LA +VE+L L +GG Sbjct: 656 GGVGADTMIGGLGNDSYFVDDAGDQVTEAADEGVDTVYSRISMRLAANVENLTLLDGGTP 715 Query: 664 FNGSGNTLNNLITGNSQDNLLDGGQG-ADTLIGGKGNDTYVVDDIGDKVVEQAGEGIDSV 722 G+ LI G + LD QG T G +T VV+ + ++ +Q + V Sbjct: 716 LRGTVEGKAALIYGAPKAYDLDYQQGNGVTGYDGTCGETSVVNVL--RMADQWVSEKEVV 773 Query: 723 QSKISYTLGDNLENLSLMDSTSAQAQTINGKAAL-------VYGFPHNYDLDYSQ 770 Q I + + D+ SA A+ G +AL YG Y L Y Q Sbjct: 774 QRAID-------KKWCITDAPSASAK--GGSSALDQKRLLESYGLRAEYTLKYDQ 819 Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 84/157 (53%), Gaps = 8/157 (5%) Query: 398 AGGGGDDVINGSKGDDILWGGDGKDLLWGKEGDDQLYGENGDDQLVGAEGNDLLSGGAGA 457 AG GDD + GS G+D L GGDGKD L+G +G+D L G G D L G +G+D + Sbjct: 538 AGTAGDDQLLGSTGEDSLHGGDGKDWLFGFDGNDVLDGGLGADTLYGGDGDDTYIVNSSD 597 Query: 458 DRIFAGL--GNDRIWGGDGDDDLYGN--DLKAGVTKGLE-PGQTDDDQIVGGAGNDSISG 512 DR+ + G+D + L N DL+ L G T D+ IVG ++ + G Sbjct: 598 DRVVETINGGHDTVIAS-CSTILAANVEDLRLVEGGNLNGAGNTLDNLIVGNGQDNILDG 656 Query: 513 GLGNDQLWGGIGNDSLYGEEGDDKLDGEA--GNDRLY 547 G+G D + GG+GNDS + ++ D++ A G D +Y Sbjct: 657 GVGADTMIGGLGNDSYFVDDAGDQVTEAADEGVDTVY 693 >gi|300312185|ref|YP_003776277.1| calcium binding secreted hemolysin protein [Herbaspirillum seropedicae SmR1] Length = 984 Score = 632 bits (1629), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/594 (54%), Positives = 420/594 (70%), Gaps = 20/594 (3%) Query: 521 GGIGNDSLYGEEGDDKLDGEAGNDRLYGGAGNDVLQGGDGDDVLYGDYMRAYAAATNDIG 580 GG GND L+ G++ + G G+DV+ GGDGDD L G A A D Sbjct: 409 GGAGNDVLFATNGEE----------INGNGGDDVIYGGDGDDTLVGGTYSALARGETD-- 456 Query: 581 GDDLIYGGAGNDSLYGSVGNDLLDGGSGNDYLEGGKGDDTYLVDCSGDTVVENANEGHDT 640 +D++YGGAG DSL G VGNDLLDGG+G+D + GG GDD Y+VD +GD V ENA+ G DT Sbjct: 457 -NDVLYGGAGKDSLSGGVGNDLLDGGTGDDRMYGGAGDDIYVVDSAGDGVFENADAGRDT 515 Query: 641 VVASCSLTLATHVEDLHLAEGGNFNGSGNTLNNLITGNSQDNLLDGGQGADTLIGGKGND 700 V+A S TL +VEDL L EGG++NG+GN L+N +TGNSQDN+LDG GADT++GG+GND Sbjct: 516 VLAGMSTTLGENVEDLRLLEGGSYNGTGNFLDNRLTGNSQDNILDGLAGADTMMGGQGND 575 Query: 701 TYVVDDIGDKVVEQAGEGIDSVQSKISYTLGDNLENLSLMDSTSAQAQTINGKAALVYGF 760 Y VD++GD+V+E+AGEGID+V S +S TLG N+ENL+LMD+ + I G+ AL+YG Sbjct: 576 RYFVDNVGDQVIEEAGEGIDTVYSTVSMTLGANVENLTLMDARTPVHGEIYGQDALIYGT 635 Query: 761 PHNYDLDYSQGDEVPGYKGTCGETSVANICIMSGLQETEADVVKRAIANGWCRTQAATDE 820 P +Y +DY QGD PG+ GTCG TSVAN+ M+G+ TE + ++RAI WC + + Sbjct: 636 PKSYLMDYRQGDARPGFLGTCGVTSVANMLTMAGVNVTEKETLQRAIDRDWCDSDPSLPI 695 Query: 821 T-RGGCNQYDQMNLLKSFGLPSDCSYGYDQAKLAGLLKDGRGVLIAVNAGKLWDDPDYVQ 879 T RGG D L+ SFG+ + Y YD+A+L LLK G V + +A D Y+ Sbjct: 696 TLRGGVTCNDLAELMGSFGVAGEVDYRYDEARLVKLLKGGHVVTLCADAAVFRDMSGYLA 755 Query: 880 GGVLN-HVVTVTGVACDASSGDVLGFYIADSGRGQTADANRYLSADDMRKVADAYGANMV 938 G + H V V+GVAC A +G+VLGFYI DSG G+ ++ NR+LS D+R + DA+ + ++ Sbjct: 756 GKRVGFHAVAVSGVACSAKTGEVLGFYITDSGPGRYSEMNRFLSVGDLRNM-DAHESALI 814 Query: 939 YTLDPIKIRNENIDATGNALDNVLTGNRGNNILTGGRGDDTLIGGAGNDTYVFTRGDGRD 998 Y++DP K+ + + ATGN LDN+L GN+ NN+LTG +G+DTL G AGNDTYVF +GDGRD Sbjct: 815 YSVDPAKLLHRDSSATGNELDNILVGNQDNNLLTGAKGNDTLTGQAGNDTYVFGKGDGRD 874 Query: 999 QIIDNDTTRGNQDVLQFKDAKQTNLWFSQAGQDLQIDVLGSSDRVTVKDWYVGGKSGTDR 1058 ++D D T GN D ++F DA+QTNLWFSQ G+DLQIDVLGS+D+VTVKDWY +G D Sbjct: 875 LVVDQDATAGNIDTIKFSDARQTNLWFSQVGKDLQIDVLGSTDQVTVKDWY----AGADN 930 Query: 1059 HVERIKTADGATLYDSDVEQLVQAMASFAPPAALQTEWTSGQTSAGKVLLTVTH 1112 VERIKTADG TLYDSDV++LVQAMASF PPAA QT WT GQTS GKVLLTVTH Sbjct: 931 RVERIKTADGKTLYDSDVDKLVQAMASFDPPAATQTSWTDGQTSKGKVLLTVTH 984 Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 90/288 (31%), Positives = 120/288 (41%), Gaps = 60/288 (20%) Query: 335 LRDDDNAFHLNGGRTINFAPNQIKALNSQPGCL----IGTDGNDLLDPNLGTSNYNVNVQ 390 LR D +L G + P Q++A+ S G GND+L T+ +N Sbjct: 372 LRVADYQVYLRGNASFR-TPEQVQAMRSAAQASGKKNQGGAGNDVL---FATNGEEIN-- 425 Query: 391 AGPFRQLAGGGGDDVINGSKGDDILWGGDGKDLLWGKEGDDQLYGENGDDQLVGAEGNDL 450 G GGDDVI G GDD L GG L G+ +D LYG G D L G GNDL Sbjct: 426 --------GNGGDDVIYGGDGDDTLVGGTYSALARGETDNDVLYGGAGKDSLSGGVGNDL 477 Query: 451 LSGGAGADRIFAGLGNDRIWGGDGDDDLYGN------DLKAGVTKGLEPGQTDDDQIVGG 504 L GG G DR++ G G+D D ++ N + AG++ L D + GG Sbjct: 478 LDGGTGDDRMYGGAGDDIYVVDSAGDGVFENADAGRDTVLAGMSTTLGENVEDLRLLEGG 537 Query: 505 AGNDSISGGLGNDQLWGGIGNDSLYGEEGDDKLDGEAGNDRLYGGAGND----------- 553 + N G GN ++ L G D+ LDG AG D + GG GND Sbjct: 538 SYN-----GTGN------FLDNRLTGNSQDNILDGLAGADTMMGGQGNDRYFVDNVGDQV 586 Query: 554 VLQGGDGDDVLYGDYMRAYAAATNDI--------------GGDDLIYG 587 + + G+G D +Y A ++ G D LIYG Sbjct: 587 IEEAGEGIDTVYSTVSMTLGANVENLTLMDARTPVHGEIYGQDALIYG 634 >gi|300311899|ref|YP_003775991.1| hemolysin-type calcium binding protein [Herbaspirillum seropedicae SmR1] Length = 1974 Score = 543 bits (1398), Expect = e-155, Method: Compositional matrix adjust. Identities = 272/476 (57%), Positives = 343/476 (72%), Gaps = 10/476 (2%) Query: 641 VVASCSLTLATHVEDLHLAEGGNFNGSGNTLNNLITGNSQDNLLDGGQGADTLIGGKGND 700 V A +L L DL + + NG GN L N ITGN +DN+LDG GADTL GGKGND Sbjct: 672 VTARKTLILDDTTNDLDVG-ADHLNGIGNALANRITGNDRDNILDGMAGADTLTGGKGND 730 Query: 701 TYVVDDIGDKVVEQAGEGIDSVQSKISYTLGDNLENLSLMDSTSAQAQTINGKAALVYGF 760 +Y VDD GDKV+E+AGEG+D+V + +S TL N+ENL L+D++ Q +NG LVYG Sbjct: 731 SYYVDDAGDKVIEKAGEGLDTVYATVSTTLAANVENLVLLDASKPQTAVVNGIHVLVYGR 790 Query: 761 PHNYDLDYSQGDEVPGYKGTCGETSVANICIMSGLQETEADVVKRAIANGWCRTQAATDE 820 P +Y LDY QGD V GY+GTCGET+VANI ++ +E +VV+RAI C T D+ Sbjct: 791 PKSYQLDYKQGDAVKGYRGTCGETAVANITMLGDRPASEKEVVERAIKEKLCDTLTPYDQ 850 Query: 821 TRGGCNQYDQMNLLKSFGLPSDCSYGYDQAKLAGLLKDGRGVLIAVNAGKLW----DDPD 876 RGG ++ Q LLK FGL S + G+D+ +A +K+G+GV + V+AG LW D D Sbjct: 851 FRGGSDEKQQQALLKDFGLRSSVTEGFDEKSVAQSIKEGKGVAVGVSAGNLWGMSLRDQD 910 Query: 877 YVQGGVLNHVVTVTGVACDASSGDVLGFYIADSGRGQTADANRYLSADDMRKVADAYGAN 936 +HV+TVTGVAC A +GD++GFYIADSG G+ +D R++S++ +R A G+ Sbjct: 911 QS-----DHVITVTGVACSAMTGDIVGFYIADSGLGRESDRCRFVSSEQLRYAAKVNGSY 965 Query: 937 MVYTLDPIKIRNENIDATGNALDNVLTGNRGNNILTGGRGDDTLIGGAGNDTYVFTRGDG 996 + T DPIK+RN+N+DATGN LDNVL GNRGNN+L+GG+G+D LIGG GNDTY F +GDG Sbjct: 966 TLTTDDPIKLRNQNLDATGNELDNVLVGNRGNNVLSGGKGNDLLIGGPGNDTYSFAKGDG 1025 Query: 997 RDQIIDNDTTRGNQDVLQFKDAKQTNLWFSQAGQDLQIDVLGSSDRVTVKDWYVGGKSGT 1056 +D++ D+D T+ N D L F DAKQTNLWFS+AG DL+I VLGS D+VTVKDWYVGG SGT Sbjct: 1026 QDELYDHDATKDNLDTLTFADAKQTNLWFSKAGNDLKISVLGSKDQVTVKDWYVGGDSGT 1085 Query: 1057 DRHVERIKTADGATLYDSDVEQLVQAMASFAPPAALQTEWTSGQTSAGKVLLTVTH 1112 D H+ERIKTADG TLYD+DVEQLVQAMASFAPP A Q+ W GQ+S GKVLLTVTH Sbjct: 1086 DNHIERIKTADGKTLYDTDVEQLVQAMASFAPPTATQSSWKDGQSSNGKVLLTVTH 1141 Score = 533 bits (1374), Expect = e-152, Method: Compositional matrix adjust. Identities = 266/472 (56%), Positives = 342/472 (72%), Gaps = 3/472 (0%) Query: 641 VVASCSLTLATHVEDLHLAEGGNFNGSGNTLNNLITGNSQDNLLDGGQGADTLIGGKGND 700 V A +L+L +DL L G + NG GN L+N +TGN Q+N+LDG G DT+IGGKG+D Sbjct: 1506 VAAPKNLSLDEDTDDLSL--GSSLNGIGNALDNRLTGNDQNNILDGMGGTDTMIGGKGDD 1563 Query: 701 TYVVDDIGDKVVEQAGEGIDSVQSKISYTLGDNLENLSLMDSTSAQAQTINGKAALVYGF 760 +Y +D+ GDK+VEQAGEG+D+V + S TL N+ENL L+D++ Q+ +NG LVYG Sbjct: 1564 SYYLDNAGDKIVEQAGEGVDTVYATASTTLAANVENLVLLDASKPQSAVVNGVNVLVYGM 1623 Query: 761 PHNYDLDYSQGDEVPGYKGTCGETSVANICIMSGLQETEADVVKRAIANGWCRTQAATDE 820 P +Y LDY QG EV GY GTCGETSVAN+ +M G +E +VV+RAI C T A + + Sbjct: 1624 PRSYQLDYDQGGEVEGYWGTCGETSVANVTLMGGHAVSEKEVVQRAIKENLCDTAAESAD 1683 Query: 821 TRGGCNQYDQMNLLKSFGLPSDCSYGYDQAKLAGLLKDGRGVLIAVNAGKLWDDPDYVQG 880 TRG ++ D+ LL+ FG + D +A +KDG+GV+I+V+A KLWD + + Sbjct: 1684 TRGATSEDDRQALLQDFGFAASVEEELDLKAVAQSIKDGKGVIISVSASKLWDLHEENED 1743 Query: 881 GVLNHVVTVTGVACDASSGDVLGFYIADSGRGQTADANRYLSADDMRKVADAYGANMVYT 940 +H +TVTGVAC A+SG ++GFYIADSGRG +D R++S +R + YGA+ V T Sbjct: 1744 AS-DHAITVTGVACSAASGKIVGFYIADSGRGLASDMCRFVSLQRLRAATNVYGADTVTT 1802 Query: 941 LDPIKIRNENIDATGNALDNVLTGNRGNNILTGGRGDDTLIGGAGNDTYVFTRGDGRDQI 1000 DPIK+RN+N+DATGN LDN+L GNRGNN LTGG+G+D LIGGAGNDTY F +GDG+D + Sbjct: 1803 DDPIKLRNQNLDATGNELDNILVGNRGNNALTGGKGNDLLIGGAGNDTYAFAKGDGQDVL 1862 Query: 1001 IDNDTTRGNQDVLQFKDAKQTNLWFSQAGQDLQIDVLGSSDRVTVKDWYVGGKSGTDRHV 1060 D+D T+GN D L F D KQTNLW S+AG DL+IDVLG++D+V VKDWYVGG SG+D HV Sbjct: 1863 YDHDATKGNLDTLSFSDVKQTNLWLSKAGNDLRIDVLGTTDQVLVKDWYVGGDSGSDNHV 1922 Query: 1061 ERIKTADGATLYDSDVEQLVQAMASFAPPAALQTEWTSGQTSAGKVLLTVTH 1112 ERIKTADG TLYDSDV++LVQAMASFAPPAA QT W GKVLLT++H Sbjct: 1923 ERIKTADGKTLYDSDVDKLVQAMASFAPPAATQTSWPETAGGNGKVLLTISH 1974 Score = 181 bits (459), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 96/206 (46%), Positives = 134/206 (65%), Gaps = 5/206 (2%) Query: 745 AQAQTINGKAALVYGFPHNYD-LDYSQGDEVPGYKGTCGETSVANICIMSGLQETEADVV 803 A+ I+GK LVYG+P +YD L+YSQG V GY GTC E S+AN+ ++G +EADV+ Sbjct: 186 AEHDKIDGKDVLVYGYPKSYDMLNYSQGFAVSGYYGTCTEASIANLLSIAGQDVSEADVI 245 Query: 804 KRAIANGWCRTQAATDETRGGCNQYDQMNLLKSFGLPSDCSYGYDQAKLAGLLKDGRGVL 863 KRAI NGWC T + RGG Q +LLKS+G+ + +D KLA L+K GRGV+ Sbjct: 246 KRAIVNGWCDTTSDNPCLRGGAMTGQQRDLLKSYGVETGVLNDFDPEKLAMLVKQGRGVI 305 Query: 864 IAVNAGKLW--DDPDYVQGGVL-NHVVTVTGVACDASSGDVLGFYIADSGRGQTADANRY 920 + V + +LW + P + + NHV+ +TGVA A +G +LGFYI+D+GRG+ D R+ Sbjct: 306 LGVESKELWGAELPPILHTLLNDNHVINLTGVAYAADTGALLGFYISDTGRGRPEDKARF 365 Query: 921 LSADDMRKVADA-YGANMVYTLDPIK 945 ++ ++ KVA YG N +YTLDPIK Sbjct: 366 MTVSELYKVAHFDYGCNAIYTLDPIK 391 Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 66/195 (33%), Positives = 101/195 (51%), Gaps = 1/195 (0%) Query: 752 GKAALVYGFPHNY-DLDYSQGDEVPGYKGTCGETSVANICIMSGLQETEADVVKRAIANG 810 G ++YG P Y +L+Y Q + Y T GE +VANI ++G + V++ AI Sbjct: 413 GVKLIIYGDPKAYHNLNYDQPVVMAMYTETSGEIAVANIAALAGQSLSPKTVLQTAIDEK 472 Query: 811 WCRTQAATDETRGGCNQYDQMNLLKSFGLPSDCSYGYDQAKLAGLLKDGRGVLIAVNAGK 870 C T + GG +Q+ LLK FG+ + G+D +A + +G+GV++ VN G Sbjct: 473 LCDTTKKDRDLGGGTTSENQVALLKKFGIAATLEQGFDANAVAQHIIEGKGVILRVNGGV 532 Query: 871 LWDDPDYVQGGVLNHVVTVTGVACDASSGDVLGFYIADSGRGQTADANRYLSADDMRKVA 930 LW + G ++ VTVTGVA A +G+V GFY+AD G + RY+ + +R+ Sbjct: 533 LWCKTEPDHPGRSDYSVTVTGVAFSADTGEVAGFYLADPGFELSGARPRYIEINHLRQAT 592 Query: 931 DAYGANMVYTLDPIK 945 G + T D IK Sbjct: 593 SVTGVTTITTNDAIK 607 Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 86/161 (53%), Gaps = 11/161 (6%) Query: 578 DIGGDDLIYGGAGNDSLYGSVGND---LLDGGSGNDYLEGGKGDDTYLVDCSGDTVVENA 634 D+G D L G GN GND +LDG +G D L GGKG+D+Y VD +GD V+E A Sbjct: 688 DVGADHL--NGIGNALANRITGNDRDNILDGMAGADTLTGGKGNDSYYVDDAGDKVIEKA 745 Query: 635 NEGHDTVVASCSLTLATHVEDLHLAEGGN-FNGSGNTLNNLITGNSQDNLLDGGQGADTL 693 EG DTV A+ S TLA +VE+L L + N ++ L+ G + LD QG D + Sbjct: 746 GEGLDTVYATVSTTLAANVENLVLLDASKPQTAVVNGIHVLVYGRPKSYQLDYKQG-DAV 804 Query: 694 IGGKGN--DTYV--VDDIGDKVVEQAGEGIDSVQSKISYTL 730 G +G +T V + +GD+ + +++ K+ TL Sbjct: 805 KGYRGTCGETAVANITMLGDRPASEKEVVERAIKEKLCDTL 845 Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 1/106 (0%) Query: 587 GGAGNDSLYGSVGNDLLDGGSGNDYLEGGKGDDTYLVDCSGDTVVENANEGHDTVVASCS 646 G A ++ L G+ N++LDG G D + GGKGDD+Y +D +GD +VE A EG DTV A+ S Sbjct: 1531 GNALDNRLTGNDQNNILDGMGGTDTMIGGKGDDSYYLDNAGDKIVEQAGEGVDTVYATAS 1590 Query: 647 LTLATHVEDLHLAEGGNFNGS-GNTLNNLITGNSQDNLLDGGQGAD 691 TLA +VE+L L + + N +N L+ G + LD QG + Sbjct: 1591 TTLAANVENLVLLDASKPQSAVVNGVNVLVYGMPRSYQLDYDQGGE 1636 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.311 0.132 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 3,057,838 Number of extensions: 132071 Number of successful extensions: 922 Number of sequences better than 1.0e-08: 5 Number of HSP's gapped: 524 Number of HSP's successfully gapped: 23 Length of query: 1112 Length of database: 1,619,870 Length adjustment: 95 Effective length of query: 1017 Effective length of database: 1,170,045 Effective search space: 1189935765 Effective search space used: 1189935765 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 136 (57.0 bits)