BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2794.p
         (303 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312099|ref|YP_003776191.1| carboxylesterase [Herbaspirillu...   564   e-162

>gi|300312099|ref|YP_003776191.1| carboxylesterase [Herbaspirillum
           seropedicae SmR1]
          Length = 303

 Score =  564 bits (1454), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 273/302 (90%), Positives = 287/302 (95%)

Query: 1   MDSQSSTDTSGQVDTTRADDRHGGPHKDHAVILLHGLCGSQLEMGSIPKQLKKAGCTVIP 60
           MD+ SSTD  G V    A+DR GGPHK+HAVILLHGLCGSQLEMGSIPKQLKKAGCTVIP
Sbjct: 1   MDTLSSTDHPGPVTPPPAEDRQGGPHKEHAVILLHGLCGSQLEMGSIPKQLKKAGCTVIP 60

Query: 61  LNIDNYSAALTNPRVSPRWEDWCAVVESRVARLKEEFRTVSLCGLSMGATLALAVAARSK 120
           LNIDNYSAALTNPRVSP WE+WCAVVESRVARLKEEFRTVSLCGLSMGATLALAVAARSK
Sbjct: 61  LNIDNYSAALTNPRVSPNWEEWCAVVESRVARLKEEFRTVSLCGLSMGATLALAVAARSK 120

Query: 121 ELLSVVLLSPVLQYDGWSVPWYWKLLTVVYDLGVRNWSYKESEPYGIKNFEMRRRVAAAL 180
           ELLSVVLLSPVLQYDGWSVPWYWKLLTVVYDLG RNWSYKESEPYGIKNFEMRRRVA+AL
Sbjct: 121 ELLSVVLLSPVLQYDGWSVPWYWKLLTVVYDLGFRNWSYKESEPYGIKNFEMRRRVASAL 180

Query: 181 EKDGVAAVGAAAIPARHLRAALRMIAFVRQSLPLVRTDTLIIHSIDDETASPRNAEVILQ 240
           EKDGVAAVGAA+IPARHLRAALRMI +V+QSLPLVRTDTLIIHSIDDETASPRNAE ILQ
Sbjct: 181 EKDGVAAVGAASIPARHLRAALRMIDYVKQSLPLVRTDTLIIHSIDDETASPRNAEQILQ 240

Query: 241 HINAEVRKVVWLGDCYHIITVDNEREIVTNETVMFIKRSIEIHGNELSRKYLGHSSPLKD 300
           +INAEVRKVVWLGDCYHIITVDNEREIVTNETVMFI+RSIE+HG+E SRK+L H+SPLKD
Sbjct: 241 YINAEVRKVVWLGDCYHIITVDNEREIVTNETVMFIRRSIEMHGHEFSRKHLAHASPLKD 300

Query: 301 RR 302
           RR
Sbjct: 301 RR 302


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.134    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 802,800
Number of extensions: 27424
Number of successful extensions: 106
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 106
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 218
Effective length of database: 1,217,395
Effective search space: 265392110
Effective search space used: 265392110
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)