BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2761.p (1066 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300312026|ref|YP_003776118.1| signal transduction protein con... 1921 0.0 gi|300311453|ref|YP_003775545.1| signal transduction containing ... 399 e-112 gi|300314042|ref|YP_003778134.1| signal transduction protein con... 395 e-111 gi|300312904|ref|YP_003776996.1| diguanylate cyclase/phosphodies... 385 e-108 gi|300310170|ref|YP_003774262.1| diguanylate cyclase/phosphodies... 379 e-106 >gi|300312026|ref|YP_003776118.1| signal transduction protein containing a membrane domain, an EAL and a GGDEF domain-containing protein [Herbaspirillum seropedicae SmR1] Length = 1106 Score = 1921 bits (4976), Expect = 0.0, Method: Compositional matrix adjust. Identities = 919/1055 (87%), Positives = 992/1055 (94%) Query: 1 MEKQNKSPGRPGYTLKTLLLFVGLVGSFIMVQTWWEIRQDRQLTIDSERSSSMAAVRSVQ 60 M K+NKSPGR GYTLKTLLLFV VGSFI+VQTWWEIRQDRQLTID+ER+SS+ A RS+Q Sbjct: 47 MGKENKSPGRTGYTLKTLLLFVAFVGSFIVVQTWWEIRQDRQLTIDAERASSLTAARSIQ 106 Query: 61 EHADRVFGELDQLLWATAQHLHADQPGLLDDDQGLYHLLSDMQQRMPSVMVLRYIDRNGN 120 EHA RVF +L+Q +W+TA LHA P LL++DQGLY++L+ MQQR+P+VMVLRY+DRNGN Sbjct: 107 EHATRVFNDLEQTMWSTAVQLHAGGPELLENDQGLYNVLASMQQRLPTVMVLRYVDRNGN 166 Query: 121 TRASSLRAFDTTSIADDHKLTHVDGNPARPGLFVGQLMRSRYNRELVLPVAMNLYDRSAR 180 TRA+SLR+ DT+SI +D KLT+VDGNPARP LFVGQLMRSRYNRELVLPVAMNLYDRSAR Sbjct: 167 TRATSLRSLDTSSIPEDRKLTYVDGNPARPNLFVGQLMRSRYNRELVLPVAMNLYDRSAR 226 Query: 181 PIGLLVAELRASTFFDFYKRITNFETIVSLRTDSGSMMLRSPFEERWLNISLANAKSMKR 240 PIGLLVAELRA+TFFDFYKRITNFE IVSLRT+SGSMMLRSPFEERWL+++LA+AKSM Sbjct: 227 PIGLLVAELRAATFFDFYKRITNFEAIVSLRTESGSMMLRSPFEERWLDVNLADAKSMTY 286 Query: 241 IRAGAEEGSFEEASHLTGEALLFSYKRLDKWSLVAVYARRMEDVLAPWRSRTENRILLTT 300 IRAG +EGSFEE S+LTGE LLF+Y+RL+KWSLVAVYARRM DVLAPWRSRTENRILLTT Sbjct: 287 IRAGGDEGSFEENSYLTGEPLLFAYRRLEKWSLVAVYARRMNDVLAPWRSRTENRILLTT 346 Query: 301 GILGFILLALISFLVYYRYQRRLDHALSASEYRYRKLYEEGSDPIVLISAELRYLDCNSA 360 GILGFIL+ALISFLVYYRYQRRLDHALSASEYRYRKLYEEG+DPIVLISAELRYLDCN+A Sbjct: 347 GILGFILIALISFLVYYRYQRRLDHALSASEYRYRKLYEEGNDPIVLISAELRYLDCNAA 406 Query: 361 ALRFFGLPDKERIIGRKVGLFSRQKSRQAQQPDIDELVGRVLAGQPQQFEWVTVRRNKII 420 ALRFFG+PDKERIIGRKVGLFSRQKSR +QPDIDELV RVL+GQPQQFEWVTVRRNKII Sbjct: 407 ALRFFGVPDKERIIGRKVGLFSRQKSRHMEQPDIDELVARVLSGQPQQFEWVTVRRNKII 466 Query: 421 HTDVTLNRAEFERGYAIFAILRDISARKRAELLQSEQNRVLHMVMADEDLDTILNEIVGF 480 HTDVTLNRAEFERGYAIFAILRDISARKRAELLQSEQNRVLHMVMAD++LD +L EIV F Sbjct: 467 HTDVTLNRAEFERGYAIFAILRDISARKRAELLQSEQNRVLHMVMADDELDGVLYEIVNF 526 Query: 481 ADTQIPYGASSVMLVNEQASHFTSVLSRRYPPRLLRALQGMPIRHGCGVAAEAALRRGPC 540 AD QIPYGA SVMLVNEQASHFTSVLS RYPPRL+RALQGMPIRHGCGV AEAALRRGPC Sbjct: 527 ADAQIPYGACSVMLVNEQASHFTSVLSHRYPPRLIRALQGMPIRHGCGVGAEAALRRGPC 586 Query: 541 IVTDISRDPVTEHLRVLIDVEIYPSCGAWPIMGKEGQLLGVFAALLKENQAPSNEYLQLA 600 IV +I++DP+TEHLR LID EIYPSCGAWPI+GKEGQLLGVFAALLKENQAPSNEYLQLA Sbjct: 587 IVANIAQDPITEHLRPLIDTEIYPSCGAWPIIGKEGQLLGVFAALLKENQAPSNEYLQLA 646 Query: 601 NIAADLASVAIESRRADERIRHLAHYDELTGLPNRFLCTQHVSNAITHAEHRNGLVAVLL 660 NIAADLASVAIESRRADERIRHLAHYDELTGLPNRFLCTQHVSNAITHAEHRNG+VAV+L Sbjct: 647 NIAADLASVAIESRRADERIRHLAHYDELTGLPNRFLCTQHVSNAITHAEHRNGMVAVIL 706 Query: 661 MDLDRFKNINDTFGHQAGEAVLQEIAQRFRHSLRELDILARVGGDEFIVLVDDFDDPLQL 720 MDLDRFKNINDTFGH+ GEAVLQEIAQRFR+SLRELDILARVGGDEFIVLVDDFDDP+QL Sbjct: 707 MDLDRFKNINDTFGHETGEAVLQEIAQRFRNSLRELDILARVGGDEFIVLVDDFDDPVQL 766 Query: 721 GEIAQKLLTEARKPFIIDGQEATLSASIGIATYPGDGDNAQTLIKNADIAMYRAKHHGKD 780 GEIAQKLLTEARKPFIIDGQEA LS SIGIATYPGDGDNAQTLIKNADIAMYRAKHHGKD Sbjct: 767 GEIAQKLLTEARKPFIIDGQEAMLSVSIGIATYPGDGDNAQTLIKNADIAMYRAKHHGKD 826 Query: 781 DYRFFSDEVNTNTVERIALEAELRRAIERAEFVVHYQPKVDLASGAIVGAEALVRWQHPV 840 DYRFFSDE+NTNTVERIALEAELRRAIERAEFVVHYQPK++LA G IVGAEALVRWQHP+ Sbjct: 827 DYRFFSDEINTNTVERIALEAELRRAIERAEFVVHYQPKIELAEGRIVGAEALVRWQHPL 886 Query: 841 RGLVGPNEFIPMAEESRLIDQIGLVVLDIACRDIGLLLEHQLECGRISINLTGSQFGDAH 900 RGL+ P EFI +AEE+RLIDQIGL+VLD+ACRDIGL+ + Q+ CGRISINLTGSQFGD Sbjct: 887 RGLLPPGEFITLAEETRLIDQIGLLVLDVACRDIGLMRQQQMTCGRISINLTGSQFGDER 946 Query: 901 LLQDIKGVVQRHGTPPACLEFEITESMVMRNRDRAIAIMDGIRAEGFTISIDDFGTGYSS 960 LL DIK VV RHGTPP+CLEFEITESMVM NR+RAIAIMDGIRAEGFTISIDDFGTGYSS Sbjct: 947 LLDDIKEVVDRHGTPPSCLEFEITESMVMHNRERAIAIMDGIRAEGFTISIDDFGTGYSS 1006 Query: 961 LAYLKRFPVNTLKIDKSFINDIPDDANSSAIVQAIIAMSHALNLKVVTEGVETERQWQAL 1020 LAYLKRFPVNTLKIDKSFINDIPD+ NSSAIVQAIIAMSHALNLKVVTEGVETE+Q QAL Sbjct: 1007 LAYLKRFPVNTLKIDKSFINDIPDNPNSSAIVQAIIAMSHALNLKVVTEGVETEKQLQAL 1066 Query: 1021 REFGSDEYQGYYFSKPVPYAQFLQMLLQQQAQRQA 1055 REFGSDEYQGYYFSKPVPYAQF+Q+L QQ + Q Sbjct: 1067 REFGSDEYQGYYFSKPVPYAQFVQLLAGQQDRPQG 1101 >gi|300311453|ref|YP_003775545.1| signal transduction containing PAS/GGDEF/EAL domains protein [Herbaspirillum seropedicae SmR1] Length = 683 Score = 399 bits (1025), Expect = e-112, Method: Compositional matrix adjust. Identities = 220/442 (49%), Positives = 291/442 (65%), Gaps = 9/442 (2%) Query: 612 ESRRADERIRHLAHYDELTGLPNRFLCTQHVSNAITHAEHRNGLVAVLLMDLDRFKNIND 671 E + A++ I HLA+YD LTGLPNR L T+ V A+ A H N V+ +DL+RFK IND Sbjct: 232 ERKNAEKLIHHLAYYDALTGLPNRTLLTRTVDQALEEARHENLHGCVMFIDLNRFKPIND 291 Query: 672 TFGHQAGEAVLQEIAQRFRHSLRELDILARVGGDEFIVLV--DDFDDPLQLGEIAQKLLT 729 T GH AG+ +L E+A R R +LRE D++AR+G DEF V + D D P +AQKLL Sbjct: 292 TLGHVAGDMLLVEVAMRLRRALREQDVVARLGADEFAVALFGIDKDSP---AYVAQKLLA 348 Query: 730 EARKPFIIDGQEATLSASIGIATYPGDGDNAQTLIKNADIAMYRAKHHGKDD---YRFFS 786 PF IDG E + ASIG++ YP + + +TL++ ADIAMYRAK G+++ Y +S Sbjct: 349 LFDDPFFIDGHELRVGASIGVSLYPENATDTETLLRLADIAMYRAKQGGENNEGGYACYS 408 Query: 787 DEVNTNTVERIALEAELRRAIERAEFVVHYQPKVDLASGAIVGAEALVRWQHPVRGLVGP 846 +E+N NT++ + +E L A E E +++YQPKVD+ + AI GAEALVRWQHP RGL+ P Sbjct: 409 EEMNRNTLDLLRIETGLLHAFEYNELLLYYQPKVDMQTLAITGAEALVRWQHPERGLLLP 468 Query: 847 NEFIPMAEESRLIDQIGLVVLDIACRDIGLLLEHQLECGRISINLTGSQFGDAHLLQDIK 906 EFIP+AEE+ LI Q+ VLD CR + L RI++N+T +F + L + Sbjct: 469 GEFIPIAEETGLIVQLSDWVLDAVCRQARAWKDAGLPPIRIALNVTAREFTRS-LPDRVG 527 Query: 907 GVVQRHGTPPACLEFEITESMVMRNRDRAIAIMDGIRAEGFTISIDDFGTGYSSLAYLKR 966 ++RH LE EITESM+M + DR I+IM+ I G T+S+DDFGTGYSSL+YLKR Sbjct: 528 AALERHMLSGEWLELEITESMLMHSTDRVISIMEKICGLGITVSLDDFGTGYSSLSYLKR 587 Query: 967 FPVNTLKIDKSFINDIPDDANSSAIVQAIIAMSHALNLKVVTEGVETERQWQALREFGSD 1026 FP+NTLKID+SF IPDD N AI AII ++ L KV+ EGVE E+Q+ LRE G + Sbjct: 588 FPINTLKIDRSFTMGIPDDTNDCAIASAIIGIAKQLRHKVIAEGVEDEKQFNFLREAGCN 647 Query: 1027 EYQGYYFSKPVPYAQFLQMLLQ 1048 E QGY FS+PVP F MLL+ Sbjct: 648 ELQGYIFSRPVPAPDFHAMLLE 669 >gi|300314042|ref|YP_003778134.1| signal transduction protein containing a membrane domain, an EAL and a GGDEF domain-containing protein [Herbaspirillum seropedicae SmR1] Length = 948 Score = 395 bits (1016), Expect = e-111, Method: Compositional matrix adjust. Identities = 197/440 (44%), Positives = 287/440 (65%), Gaps = 10/440 (2%) Query: 614 RRADERIRHLAHYDELTGLPNRFLCTQHVSNAITHAEHRNGLVAVLLMDLDRFKNINDTF 673 +R + + A D LTGL NR + H+ AI AE + + V+ +DLDRFK +NDT Sbjct: 509 KRYEAELEFQASRDTLTGLINRHMLRHHLEQAIGVAERQKQALWVVFVDLDRFKFVNDTL 568 Query: 674 GHQAGEAVLQEIAQRFRHSLRELDILARVGGDEFIVLVDDFDDPLQLGEIAQKLLTEARK 733 GH+AG+ +L+ +A R R ++RE D +AR+GGDEFI+++ + D+ Q+++ Sbjct: 569 GHKAGDTLLRTVAGRLRAAVREADTVARLGGDEFIMILPEQDELTLDTRSLQRIMDAVAA 628 Query: 734 PFIIDGQEATLSASIGIATYPGDGDNAQTLIKNADIAMYRAKHHGKDDYRFFSDEVNTNT 793 P + G ++ S+G+A YP DG + +TLIK+ADIAMYR K G+++++F++ +N Sbjct: 629 PVTLGGHTLFMTCSVGVACYPNDGTDGETLIKHADIAMYRGKQTGRNNFQFYTPAMNEQA 688 Query: 794 VERIALEAELRRAIERAEFVVHYQPKVDLASGAIVGAEALVRWQHPVRGLVGPNEFIPMA 853 +ER+ +E +LR A++ EF++HYQPKVDLASG ++G+EAL+RWQHP G+V P FI +A Sbjct: 689 LERLRIEGDLRNALDHGEFLLHYQPKVDLASGRVIGSEALIRWQHPQLGMVSPARFIGLA 748 Query: 854 EESRLIDQIGLVVLDIACRDIGLLLEHQLECG-----RISINLTGSQFGDAHLLQDIKGV 908 EE+ LI IG VL AC Q + G +S+NL+ QF L+ I V Sbjct: 749 EETGLILPIGAWVLRAACTQC-----RQWQLGGYADISVSVNLSVGQFLQKDLVSSIADV 803 Query: 909 VQRHGTPPACLEFEITESMVMRNRDRAIAIMDGIRAEGFTISIDDFGTGYSSLAYLKRFP 968 ++ G PP LE E+TES++M + + AI I+ G++ G +SIDDFGTGYSSLAYLKRFP Sbjct: 804 LEDTGLPPESLELELTESLMMTDVEHAIGILAGLKKLGVRLSIDDFGTGYSSLAYLKRFP 863 Query: 969 VNTLKIDKSFINDIPDDANSSAIVQAIIAMSHALNLKVVTEGVETERQWQALREFGSDEY 1028 ++ LKID+SF+ DI DA+ +AI +II+++ L L+V+ EGVET+ Q LR +G DE Sbjct: 864 IDVLKIDRSFVRDITIDADDAAITASIISLARHLKLRVIAEGVETDEQLDYLRHYGCDEI 923 Query: 1029 QGYYFSKPVPYAQFLQMLLQ 1048 QGY FS PVP +F Q+L Q Sbjct: 924 QGYLFSPPVPADKFEQILRQ 943 >gi|300312904|ref|YP_003776996.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domains protein [Herbaspirillum seropedicae SmR1] Length = 701 Score = 385 bits (990), Expect = e-108, Method: Compositional matrix adjust. Identities = 195/442 (44%), Positives = 295/442 (66%), Gaps = 3/442 (0%) Query: 610 AIESRRADE-RIRHLAHYDELTGLPNRFLCTQHVSNAITHAEHRNGLVAVLLMDLDRFKN 668 AI R+A E +RH A +D LTGLPNR + +H+ A+ A + L AV +DLD+FK Sbjct: 251 AITERKAHEAEMRHQATHDALTGLPNRNMLHEHLQRALRVARQKGALTAVAFVDLDQFKF 310 Query: 669 INDTFGHQAGEAVLQEIAQRFRHSLRELDILARVGGDEFI-VLVDDFDDPLQLGEIAQKL 727 IND+ GHQ G+ +L+ +AQR + LRE D++AR GGDEF+ VL + + + E+ Q++ Sbjct: 311 INDSLGHQVGDELLKTVAQRLQACLREADMVARQGGDEFVLVLQNQTEGEAGIAEVMQRI 370 Query: 728 LTEARKPFIIDGQEATLSASIGIATYPGDGDNAQTLIKNADIAMYRAKHHGKDDYRFFSD 787 L +P+ +E ++ASIG++ YP DG + ++L+K+AD AMYRAK G+++++FF+ Sbjct: 371 LAAVARPWQAGDREFQVTASIGVSRYPADGKDVESLLKHADSAMYRAKEQGRNNFQFFAP 430 Query: 788 EVNTNTVERIALEAELRRAIERAEFVVHYQPKVDLASGAIVGAEALVRWQHPVRGLVGPN 847 +++ R+ + LRRA+++ EF ++YQPK+ L G ++GAEAL+RW+ P +G+V P+ Sbjct: 431 WMDSQVSNRLEMLINLRRALDQDEFKLYYQPKLSLQDGRLIGAEALIRWESPQQGMVPPD 490 Query: 848 EFIPMAEESRLIDQIGLVVLDIACRDIGLLLEHQLECGRISINLTGSQFGDAHLLQDIKG 907 FIP AEE+ LI IG VL ACR + L +++NL+ Q + L + G Sbjct: 491 RFIPFAEEAGLIVPIGEWVLRTACRQNQAWQQAGLPPIPVAVNLSPRQLNQS-LPDFVAG 549 Query: 908 VVQRHGTPPACLEFEITESMVMRNRDRAIAIMDGIRAEGFTISIDDFGTGYSSLAYLKRF 967 V+ + G + LE EITE++VM++ ++++A + ++ G IS+DDFGTGYSSL+YL+RF Sbjct: 550 VLAQSGLAASWLELEITENVVMKDAEKSVATLHALKRLGLQISVDDFGTGYSSLSYLRRF 609 Query: 968 PVNTLKIDKSFINDIPDDANSSAIVQAIIAMSHALNLKVVTEGVETERQWQALREFGSDE 1027 PV+ LKIDKSF+ DI DA+S+AIV+AII+++H LNL+V+ EGVE E Q L+E DE Sbjct: 610 PVDALKIDKSFVRDIVRDADSAAIVKAIISLAHILNLRVIAEGVEDEEQHAFLKENACDE 669 Query: 1028 YQGYYFSKPVPYAQFLQMLLQQ 1049 QGYYF KP+ A F + +Q Sbjct: 670 VQGYYFGKPMEVAVFTAWMSEQ 691 >gi|300310170|ref|YP_003774262.1| diguanylate cyclase/phosphodiesterase A protein [Herbaspirillum seropedicae SmR1] Length = 1002 Score = 379 bits (972), Expect = e-106, Method: Compositional matrix adjust. Identities = 235/710 (33%), Positives = 366/710 (51%), Gaps = 29/710 (4%) Query: 340 EGSDPIVLISAELRYLDCNSAALRFFGLPDKERIIGRKVG-LFSRQKSRQAQQPDIDELV 398 E + +++ + R + N+ R G + +++IGR G LF+ SR ++ Sbjct: 278 ETDNAVLITDDQNRIVFHNTGFTRMLGF-ESQQVIGRLPGELFA---SRPTFVKSLERCH 333 Query: 399 GRVLAGQPQQFE-----------WVTVRRNKIIHTDVTLNRAEFERGYAIFAILRDISAR 447 G ++ G+ E W++ N I+ L A ++ DI+ Sbjct: 334 GELVQGRSYHTEELIHDMQEQPVWISAVVNPILDGAGKLIHA--------VCVMTDITNT 385 Query: 448 KRAELLQSEQNRVLHMVMADEDLDTILNEIVGFADTQIPYGASSVMLVNEQASHFTSVLS 507 K E+LQ RVL+ + D L +N + + P +SV+ V+E ++ + Sbjct: 386 KVHEVLQY---RVLNAMARDSSLSEQMNLLCEEVERVAPEVIASVLRVDEHGC-LRTLAA 441 Query: 508 RRYPPRLLRALQGMPIRHGCGVAAEAALRRGPCIVTDISRDPVTEHLRVLIDVEIYPSCG 567 P +A+ G+ + G AA I DI DP + L +C Sbjct: 442 PSLPEAYSKAIDGLHVGPMVGCCGSAAYTGQTVISEDIQTDPHWNDYKHLALPHGLRACW 501 Query: 568 AWPIMGKEGQLLGVFAALLKENQAPSNEYLQLANIAADLASVAIESRRADERIRHLAHYD 627 + PI GQ++G F + PS + L L ++AIE A RI LA YD Sbjct: 502 STPIKSASGQVIGTFGFYYRHPGQPSAFHHLLVEAGLHLCALAIEREDARARIHQLAFYD 561 Query: 628 ELTGLPNRFLCTQHVSNAITHAEHRNGLVAVLLMDLDRFKNINDTFGHQAGEAVLQEIAQ 687 LTGLPNR L AI AE VAV+ +DLDRFK +ND+ GHQAG+ +L+ +A Sbjct: 562 SLTGLPNRSLLLVQAGQAIAAAERNCSTVAVMFIDLDRFKQVNDSLGHQAGDELLRTVAT 621 Query: 688 RFRHSLRELDILARVGGDEFIVLVDDFDDPLQLGEIAQKLLTEARKPFIIDGQEATLSAS 747 R + R DI+ R+ GDEF+V++ +D L E+ +++ P I+G SAS Sbjct: 622 RLQSQARRSDIVGRLSGDEFVVVLTQYDTQ-HLTEVVKRIQERLAMPCHINGTPLNPSAS 680 Query: 748 IGIATYPGDGDNAQTLIKNADIAMYRAKHHGKDDYRFFSDEVNTNTVERIALEAELRRAI 807 IG+A +P +G++ +TL+ ADIAMY+AK + + FFS+E+N+ ER+ALE+ LR A+ Sbjct: 681 IGVAIFPDNGNDIETLLHRADIAMYQAKAVNRGRFSFFSEEMNSMAQERLALESALRDAL 740 Query: 808 ERAEFVVHYQPKVDLASGAIVGAEALVRWQHPVRGLVGPNEFIPMAEESRLIDQIGLVVL 867 + +++QP++ L ++ G EAL RW HP G + P FIP+AEE LI ++G L Sbjct: 741 RGGDLELNFQPQIKLHDQSLHGVEALARWHHPQLGQISPGRFIPIAEECGLIGELGKWAL 800 Query: 868 DIACRDIGLLLEHQLECGRISINLTGSQFGDAHLLQDIKGVVQRHGTPPACLEFEITESM 927 + AC + ++ IS+NL+ + F D L Q + G+++R+ P+ L EITE++ Sbjct: 801 EEACFQLSDWRRRGIQVPSISVNLSATNFHDLDLPQFVTGLLRRYALEPSDLTLEITETV 860 Query: 928 VMRNRDRAIAIMDGIRAEGFTISIDDFGTGYSSLAYLKRFPVNTLKIDKSFINDIPDDAN 987 +M + + A G +++DDFGTGYSSL YL++ PV+ LK+D+SF+ D+ D Sbjct: 861 LMDTNPSTSQTIAAVHALGIPLAMDDFGTGYSSLGYLRKLPVSELKLDQSFVRDMAKDPA 920 Query: 988 SSAIVQAIIAMSHALNLKVVTEGVETERQWQALREFGSDEYQGYYFSKPV 1037 SA+ A+I + +L L VV EGVE Q+ L G D QGY FS+P+ Sbjct: 921 VSALTNAVIRIGESLKLTVVAEGVEDAEQYALLISQGCDVAQGYLFSRPM 970 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.322 0.137 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 3,002,285 Number of extensions: 120131 Number of successful extensions: 462 Number of sequences better than 1.0e-08: 45 Number of HSP's gapped: 392 Number of HSP's successfully gapped: 49 Length of query: 1066 Length of database: 1,619,870 Length adjustment: 95 Effective length of query: 971 Effective length of database: 1,170,045 Effective search space: 1136113695 Effective search space used: 1136113695 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 136 (57.0 bits)