BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2701.p
         (666 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311968|ref|YP_003776060.1| Mg-chelatase subunit ChlI prote...  1021   0.0  

>gi|300311968|ref|YP_003776060.1| Mg-chelatase subunit ChlI protein
           [Herbaspirillum seropedicae SmR1]
          Length = 663

 Score = 1021 bits (2641), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 552/677 (81%), Positives = 591/677 (87%), Gaps = 25/677 (3%)

Query: 1   MTAVNAYPFAAIVGQPLLKQALLLCAVDPGIGGVLVRGDKGTAKSTAARGLTQVLPSIAL 60
           MTA+  YPF+AIVGQPLL+QALLLCAVDPGIGGVLVRGDKGTAKSTAARGLTQVLP IA 
Sbjct: 1   MTALPVYPFSAIVGQPLLQQALLLCAVDPGIGGVLVRGDKGTAKSTAARGLTQVLPPIAR 60

Query: 61  NQGCAFHCAPGQPAAACSVCNAETVPVQHQASVPFVTLPLGATEDRVLGSLDLQQALQGG 120
              CAF+CAPGQPAAAC++CN +  P    A +PFVTLPLGATEDRVLGSLDLQQALQGG
Sbjct: 61  VAACAFNCAPGQPAAACTLCNGDNAPAAAPADLPFVTLPLGATEDRVLGSLDLQQALQGG 120

Query: 121 QRAFQPGLLAAAHRGILYIDEVNLLADHLVDVLLDVAAMGVNSVQREGLSVSHPARFTLI 180
           QRAFQPGLLAAAHRGILYIDEVNLLADHLVDVLLDVAAMG+N+VQREGLSVSHPARFTLI
Sbjct: 121 QRAFQPGLLAAAHRGILYIDEVNLLADHLVDVLLDVAAMGINAVQREGLSVSHPARFTLI 180

Query: 181 GTMNLEEGDLRPQLLDRFGLMVEVTAPTDKTVRAEVVRRRIAFEADPTAFAGRWQAQQDA 240
           GTMNLEEGDLRPQLLDRFGLMVEV APTDKTVRAEVVRRRIAFEADP AFA +WQ +QDA
Sbjct: 181 GTMNLEEGDLRPQLLDRFGLMVEVNAPTDKTVRAEVVRRRIAFEADPAAFASQWQDRQDA 240

Query: 241 LRTEVAQAQRLLPEVALDDAMLELISHLCCEFEVASLRADIVMHKTARAIAALAARQRVT 300
           LR +VAQAQRLLPEV LDDAMLELISHLCCEFEVASLRADIVMHKTARAIAAL AR RVT
Sbjct: 241 LRNQVAQAQRLLPEVVLDDAMLELISHLCCEFEVASLRADIVMHKTARAIAALQARSRVT 300

Query: 301 PDDVRAAAMLVLPHRRRRKPFEQTGMDQDQLDELVDQARQPQPPAQAQQGDEQKGDEQQP 360
           PDDVR AA+LVLPHRRRRKPFEQTGMDQD+LD+L+DQAR P+PPA     D  +G  + P
Sbjct: 301 PDDVREAALLVLPHRRRRKPFEQTGMDQDKLDDLIDQARTPEPPAP----DAGEGSGEAP 356

Query: 361 PQQ-----------QDQSPDQPPEPPPDQEGEGGQQTFAVAASGSARKISVATTPATATH 409
           PQ+           +    DQP E        GGQQTFA+AA+G ARKISVA     +  
Sbjct: 357 PQEPSPEQEQPEEGEQDQQDQPSE-------AGGQQTFAIAAAGQARKISVAAPAQASAA 409

Query: 410 LPSGRRSTIADASRGSALRAVPDPNPERLAVGATLRSAAVRAALAEDTGAAGERLSVQRE 469
             SGRRS +ADASRGSA+RAVPD NP+RLA+GATLRSAAVR+AL+ +    GERL+V R 
Sbjct: 410 --SGRRSAVADASRGSAVRAVPDANPDRLAIGATLRSAAVRSALSGEA-EPGERLAVSRA 466

Query: 470 DLHRQVRNGRGANLIVFVVDASGSMAAQRRMEAVKGAVMALLTDAYQRRDQLAVIAFRGE 529
           DLHRQVR+GRGANLIVFVVDASGSMAAQRRMEAVKGAV+ALLTDAYQRRDQLAVIAFRGE
Sbjct: 467 DLHRQVRSGRGANLIVFVVDASGSMAAQRRMEAVKGAVLALLTDAYQRRDQLAVIAFRGE 526

Query: 530 QAQLLLAPTRSADLAEQGLRDLPTGGRTPLPHALQLAAQLLQQSRQEAPPLLVILSDGKA 589
           QAQLLLAPTRSADLAEQGLR+LPTGGRTPLPHALQLAAQ+LQQ+  EAPPLLVILSDGKA
Sbjct: 527 QAQLLLAPTRSADLAEQGLRELPTGGRTPLPHALQLAAQVLQQASPEAPPLLVILSDGKA 586

Query: 590 NVALPGSSGDAWAQTLAAAHSLAAQGVPALVLDTESGYLRLGRAAQLAEALGASCLTLEQ 649
           NV+LPGS GDAWAQTL AA  LAAQ VPALVLDTESGYLRLGRAAQLAEALGA CLTLEQ
Sbjct: 587 NVSLPGSHGDAWAQTLEAADMLAAQAVPALVLDTESGYLRLGRAAQLAEALGAPCLTLEQ 646

Query: 650 LTGDALALTVRAQLGAR 666
           LTGDALALTVRAQLGAR
Sbjct: 647 LTGDALALTVRAQLGAR 663


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.131    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,790,759
Number of extensions: 69740
Number of successful extensions: 321
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 319
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1,619,870
Length adjustment: 91
Effective length of query: 575
Effective length of database: 1,188,985
Effective search space: 683666375
Effective search space used: 683666375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 134 (56.2 bits)