BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2594.p (1034 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311871|ref|YP_003775963.1| EAL domain-containing protein [... 1828 0.0 gi|300312904|ref|YP_003776996.1| diguanylate cyclase/phosphodies... 453 e-128 gi|300314042|ref|YP_003778134.1| signal transduction protein con... 436 e-123 gi|300311453|ref|YP_003775545.1| signal transduction containing ... 372 e-104 gi|300312606|ref|YP_003776698.1| EAL domain transmembrane protei... 363 e-101 >gi|300311871|ref|YP_003775963.1| EAL domain-containing protein [Herbaspirillum seropedicae SmR1] Length = 1036 Score = 1828 bits (4736), Expect = 0.0, Method: Compositional matrix adjust. Identities = 912/1036 (88%), Positives = 962/1036 (92%), Gaps = 2/1036 (0%) Query: 1 VNWIRLILLPLLILATGLGVTWTAWDHERQAAAKELHTQFASVLRETVSRIEQRMASYEQ 60 +NWIRLILLPL+IL TGLGVTWTAW+HER+AA KELHTQFASVLRETVSRIEQRMASYEQ Sbjct: 1 MNWIRLILLPLVILVTGLGVTWTAWNHEREAANKELHTQFASVLRETVSRIEQRMASYEQ 60 Query: 61 MLHGVQGLISATGNIDRSQFRDYVEALNLDANFSGIQAIAIEEWIPATQLDAHLARMAHQ 120 MLHGVQGL++ATG IDRSQFRDYV+ALNLDANFSGIQAIA+EEW+PA L AHLARM Q Sbjct: 61 MLHGVQGLVAATGAIDRSQFRDYVQALNLDANFSGIQAIAVEEWVPAAALPAHLARMERQ 120 Query: 121 GL-ADYAIRPSGARDAYAPTILREPYMGRNRMPFGNDQWADPVRRAAMEKARDSGMATIS 179 GL Y IRP+G R AYAPT+LREPY+GRNR PFG DQW+DPVRR+AMEKARDSGMATIS Sbjct: 121 GLEGGYQIRPAGERSAYAPTVLREPYVGRNRTPFGFDQWSDPVRRSAMEKARDSGMATIS 180 Query: 180 GKVQ-LSNTEPSIPAFMMYLPLYQRGKPQSTIAERRASLVGWVHAVFRMSDVIASLYGES 238 GKV+ L+ P FMMYLPLY+RGKP +TIA+RRASLVGWVHA FRMSDVIASLYGE+ Sbjct: 181 GKVEVLAADGQRYPTFMMYLPLYERGKPPTTIAQRRASLVGWVHATFRMSDVIASLYGEN 240 Query: 239 NHTIGFALYDGVVQEPDALLYSSAPSSFRQRSPRLHADEYLVVANHNWTLSLSTTDAFTA 298 +HTI F+LYDGV P ALLY S ++ RL ADEY+VV NHNWTL+L T AF A Sbjct: 241 SHTIVFSLYDGVQATPQALLYQSRQHEEAPQATRLSADEYVVVGNHNWTLTLRTNAAFHA 300 Query: 299 QFGRNAEPLIAATGIGMSVTLALLAWLMMSSRVRAVRLAEKMTAELRASEEQFRAIADCT 358 QFGRNAEPLIA TGI MS++LALLAWLM+SSRVRAVRLA+KMTAELRASEEQFRAIADCT Sbjct: 301 QFGRNAEPLIATTGIAMSLSLALLAWLMVSSRVRAVRLAQKMTAELRASEEQFRAIADCT 360 Query: 359 VNWEVWWGLDGRPRWINHAVYDYTGYTVTECLSMPDFIGSIVHPDDERRIRAELARCMDG 418 VNWEVWWGLDGRPRWINHAV DYTGYTV ECL+M DFIG+I HP+DE RIRAELARCMDG Sbjct: 361 VNWEVWWGLDGRPRWINHAVLDYTGYTVEECLAMDDFIGTIAHPEDEPRIRAELARCMDG 420 Query: 419 QKREDVELRCVRKDGSVFWLALSSAPITDAQGRFTGFRTSSRDITDRKQIEAELRISAVA 478 QKREDVELRCVRKDGSVFWLALS API DAQGRFTGFRTSSRDITDRKQIEAELRISAVA Sbjct: 421 QKREDVELRCVRKDGSVFWLALSCAPIHDAQGRFTGFRTSSRDITDRKQIEAELRISAVA 480 Query: 479 FDSREGMLITDANSRILRVNKAFTEITGYTAEEIVGKHPNLLRSDRHGPAFFQEMRESIR 538 FDSREGMLITDANS+ILRVNKAFTEITGY+AEEIVGKHPNLLRSDRHGPAFFQEMRESIR Sbjct: 481 FDSREGMLITDANSKILRVNKAFTEITGYSAEEIVGKHPNLLRSDRHGPAFFQEMRESIR 540 Query: 539 RFGKWQGEIWDRRKNGEVYPEWLTISAVKNKDHQITHYVSTHHDISDRKLAEERIRELAF 598 RFGKWQGEIWDRRKNGEVYPEWLTISAVKNKD Q+THYVSTHHDISDRKLAEERIRELAF Sbjct: 541 RFGKWQGEIWDRRKNGEVYPEWLTISAVKNKDQQVTHYVSTHHDISDRKLAEERIRELAF 600 Query: 599 FDALTRLPNRTLLLDRLKQAIALSLRTRTCGALLFIDLDHFKTLNDTVGHEKGDVLLKQV 658 FDALTRLPNRTLLLDRLKQAIALSLRT+TC ALLFIDLDHFKTLNDT+GHEKGD LLKQV Sbjct: 601 FDALTRLPNRTLLLDRLKQAIALSLRTKTCAALLFIDLDHFKTLNDTIGHEKGDTLLKQV 660 Query: 659 AQRVVANVRENDTVARVGGDEFVVVLEGLNDTQQEAATQTRAIGEKILAALGETYQLDDV 718 AQR++ANVRENDTVARVGGDEFVVVLEGLN+ QQEAATQTRAIGEKIL ALG TYQLDDV Sbjct: 661 AQRLLANVRENDTVARVGGDEFVVVLEGLNELQQEAATQTRAIGEKILTALGSTYQLDDV 720 Query: 719 EYRTTASIGATVFLGRAASVDELMKQADLAMYKAKETGRNSLRFFDPAMQTAVLERATLE 778 EYRTTASIGATVFLGRAASVDELMKQADLAMYKAKETGRN+LRFFDPAMQTAVLERATLE Sbjct: 721 EYRTTASIGATVFLGRAASVDELMKQADLAMYKAKETGRNALRFFDPAMQTAVLERATLE 780 Query: 779 AGLRKAIESNQLLLHYQPQVVDGGRVTGAEVLVRWQHPQRGMVPPGDFIPLAEETGLILS 838 AGLRKAI+ NQLLLHYQPQVV+GGRVTGAEVLVRWQHPQRGMVPPGDFIPLAEETGLILS Sbjct: 781 AGLRKAIDGNQLLLHYQPQVVEGGRVTGAEVLVRWQHPQRGMVPPGDFIPLAEETGLILS 840 Query: 839 LGNWVLETACKQLAEWAKRARMDELSIAVNVSAPQLREPDFVQTVLDIIERTGANPRRLK 898 LGNWVLETAC+QLA WA + +M +LSIAVNVSAPQLREPDFVQTVLD IERTGANPRRLK Sbjct: 841 LGNWVLETACRQLATWAAQPQMADLSIAVNVSAPQLREPDFVQTVLDTIERTGANPRRLK 900 Query: 899 LELTESLLVDNVEDIIQKMFALKAYGVEFSLDDFGTGYSSLSYLKRLPLNQLKIDQSFVR 958 LELTESLLVDNVEDIIQKMFALKAYGVEFSLDDFGTGYSSLSYLKRLPLNQLKIDQSFVR Sbjct: 901 LELTESLLVDNVEDIIQKMFALKAYGVEFSLDDFGTGYSSLSYLKRLPLNQLKIDQSFVR 960 Query: 959 DVLIDPNDASIAKTIVNLAQSLGLGVIAEGVETDAQRSFLADAGCHAYQGYYFCRPVAVE 1018 DVLIDPNDASIAKTIVNLAQSLGLGVIAEGVETDAQRSFLADAGCHAYQGY+FCRPV VE Sbjct: 961 DVLIDPNDASIAKTIVNLAQSLGLGVIAEGVETDAQRSFLADAGCHAYQGYFFCRPVTVE 1020 Query: 1019 AFEKFTQDRDLHLSVA 1034 AFEKF Q+ D S A Sbjct: 1021 AFEKFAQEFDPQFSAA 1036 >gi|300312904|ref|YP_003776996.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domains protein [Herbaspirillum seropedicae SmR1] Length = 701 Score = 453 bits (1165), Expect = e-128, Method: Compositional matrix adjust. Identities = 261/639 (40%), Positives = 389/639 (60%), Gaps = 32/639 (5%) Query: 399 IVHPDDERRIRAELARCMDGQKREDVELRCVRKDGSVFWLALSSAPITDAQGRFTGFRTS 458 + HP+D +R + CM ++R D+E R VR DG+V W+ I +A G+ Sbjct: 61 LTHPEDRTLVRNHVDACMRERRRIDIEYRIVRADGAVRWVWERGVGIYNANGQVEAIEGF 120 Query: 459 SRDITDRKQI-----EAELRISAVAFDSREGMLITDANSRILRVNKAFTEITGYTAEE-- 511 +D+T+RK+ EAE R ++ ++ EG+ T + + VN A I GY + E Sbjct: 121 LQDVTERKEAAQALQEAERRYRSIFENAIEGVFQTTPDGTYIAVNPALARIYGYHSPEDL 180 Query: 512 IVGKHPNLLRSDRHGPAFFQEMRESIRRFGKWQGEIWD-----RRKNGEVYPEWLTISA- 565 IVG LR H E R+ R + QG + + R++GE+ W++ +A Sbjct: 181 IVG-----LRDISHQLYVEPERRQEFMRLMEEQGSVSNFESRVYRRDGEII--WISENAR 233 Query: 566 -VKNKDHQITHYVSTHHDISDRKLAEERIRELAFFDALTRLPNRTLLLDRLKQAIALSLR 624 V ++ +++ Y T I++RK E +R A DALT LPNR +L + L++A+ ++ + Sbjct: 234 AVYDEAGKLSCYEGTVEAITERKAHEAEMRHQATHDALTGLPNRNMLHEHLQRALRVARQ 293 Query: 625 TRTCGALLFIDLDHFKTLNDTVGHEKGDVLLKQVAQRVVANVRENDTVARVGGDEFVVVL 684 A+ F+DLD FK +ND++GH+ GD LLK VAQR+ A +RE D VAR GGDEFV+VL Sbjct: 294 KGALTAVAFVDLDQFKFINDSLGHQVGDELLKTVAQRLQACLREADMVARQGGDEFVLVL 353 Query: 685 EGLNDTQQEAATQTRAIGEKILAALGETYQLDDVEYRTTASIGATVFLGRAASVDELMKQ 744 + N T+ EA + ++ILAA+ +Q D E++ TASIG + + V+ L+K Sbjct: 354 Q--NQTEGEAGIAE--VMQRILAAVARPWQAGDREFQVTASIGVSRYPADGKDVESLLKH 409 Query: 745 ADLAMYKAKETGRNSLRFFDPAMQTAVLERATLEAGLRKAIESNQLLLHYQPQV-VDGGR 803 AD AMY+AKE GRN+ +FF P M + V R + LR+A++ ++ L+YQP++ + GR Sbjct: 410 ADSAMYRAKEQGRNNFQFFAPWMDSQVSNRLEMLINLRRALDQDEFKLYYQPKLSLQDGR 469 Query: 804 VTGAEVLVRWQHPQRGMVPPGDFIPLAEETGLILSLGNWVLETACKQLAEWAKRARMDEL 863 + GAE L+RW+ PQ+GMVPP FIP AEE GLI+ +G WVL TAC+Q W ++A + + Sbjct: 470 LIGAEALIRWESPQQGMVPPDRFIPFAEEAGLIVPIGEWVLRTACRQNQAW-QQAGLPPI 528 Query: 864 SIAVNVSAPQLRE--PDFVQTVLDIIERTGANPRRLKLELTESLLVDNVEDIIQKMFALK 921 +AVN+S QL + PDFV VL ++G L+LE+TE++++ + E + + ALK Sbjct: 529 PVAVNLSPRQLNQSLPDFVAGVL---AQSGLAASWLELEITENVVMKDAEKSVATLHALK 585 Query: 922 AYGVEFSLDDFGTGYSSLSYLKRLPLNQLKIDQSFVRDVLIDPNDASIAKTIVNLAQSLG 981 G++ S+DDFGTGYSSLSYL+R P++ LKID+SFVRD++ D + A+I K I++LA L Sbjct: 586 RLGLQISVDDFGTGYSSLSYLRRFPVDALKIDKSFVRDIVRDADSAAIVKAIISLAHILN 645 Query: 982 LGVIAEGVETDAQRSFLADAGCHAYQGYYFCRPVAVEAF 1020 L VIAEGVE + Q +FL + C QGYYF +P+ V F Sbjct: 646 LRVIAEGVEDEEQHAFLKENACDEVQGYYFGKPMEVAVF 684 >gi|300314042|ref|YP_003778134.1| signal transduction protein containing a membrane domain, an EAL and a GGDEF domain-containing protein [Herbaspirillum seropedicae SmR1] Length = 948 Score = 436 bits (1120), Expect = e-123, Method: Compositional matrix adjust. Identities = 253/585 (43%), Positives = 349/585 (59%), Gaps = 32/585 (5%) Query: 459 SRDITDRKQIEAELRISAVAFD-SREGMLITDA---NSRILRVNKAFTEITGYTAEEIVG 514 S DI R+ E LR+ A + S +LI A + I VN AF ITGY++ E VG Sbjct: 377 SDDIKARRLAERALRLRHQAIEASANAILILSAQEPDYTIEYVNPAFARITGYSSTEAVG 436 Query: 515 KHPNLLRSDRHGPAFFQE----MRES------IRRFGKWQGEIWDRRKNGEVYPEWLTIS 564 K L P F+ MRE +R + K E+W+ + Y I+ Sbjct: 437 KSIRFLEGRDSDPEGFETVWIAMREQREHNVVLRNYHKDGSELWN-----DFY-----IA 486 Query: 565 AVKNKDHQITHYVSTHHDISDRKLAEERIRELAFFDALTRLPNRTLLLDRLKQAIALSLR 624 V+++ ++TH+V+ +DI+ K E + A D LT L NR +L L+QAI ++ R Sbjct: 487 PVRDESGEVTHFVAALYDITSMKRYEAELEFQASRDTLTGLINRHMLRHHLEQAIGVAER 546 Query: 625 TRTCGALLFIDLDHFKTLNDTVGHEKGDVLLKQVAQRVVANVRENDTVARVGGDEFVVVL 684 + ++F+DLD FK +NDT+GH+ GD LL+ VA R+ A VRE DTVAR+GGDEF+++L Sbjct: 547 QKQALWVVFVDLDRFKFVNDTLGHKAGDTLLRTVAGRLRAAVREADTVARLGGDEFIMIL 606 Query: 685 EGLNDTQQEAATQTRAIGEKILAALGETYQLDDVEYRTTASIGATVFLGRAASVDELMKQ 744 Q E TR++ ++I+ A+ L T S+G + + L+K Sbjct: 607 P----EQDELTLDTRSL-QRIMDAVAAPVTLGGHTLFMTCSVGVACYPNDGTDGETLIKH 661 Query: 745 ADLAMYKAKETGRNSLRFFDPAMQTAVLERATLEAGLRKAIESNQLLLHYQPQV-VDGGR 803 AD+AMY+ K+TGRN+ +F+ PAM LER +E LR A++ + LLHYQP+V + GR Sbjct: 662 ADIAMYRGKQTGRNNFQFYTPAMNEQALERLRIEGDLRNALDHGEFLLHYQPKVDLASGR 721 Query: 804 VTGAEVLVRWQHPQRGMVPPGDFIPLAEETGLILSLGNWVLETACKQLAEWAKRARMDEL 863 V G+E L+RWQHPQ GMV P FI LAEETGLIL +G WVL AC Q +W D + Sbjct: 722 VIGSEALIRWQHPQLGMVSPARFIGLAEETGLILPIGAWVLRAACTQCRQWQLGGYAD-I 780 Query: 864 SIAVNVSAPQLREPDFVQTVLDIIERTGANPRRLKLELTESLLVDNVEDIIQKMFALKAY 923 S++VN+S Q + D V ++ D++E TG P L+LELTESL++ +VE I + LK Sbjct: 781 SVSVNLSVGQFLQKDLVSSIADVLEDTGLPPESLELELTESLMMTDVEHAIGILAGLKKL 840 Query: 924 GVEFSLDDFGTGYSSLSYLKRLPLNQLKIDQSFVRDVLIDPNDASIAKTIVNLAQSLGLG 983 GV S+DDFGTGYSSL+YLKR P++ LKID+SFVRD+ ID +DA+I +I++LA+ L L Sbjct: 841 GVRLSIDDFGTGYSSLAYLKRFPIDVLKIDRSFVRDITIDADDAAITASIISLARHLKLR 900 Query: 984 VIAEGVETDAQRSFLADAGCHAYQGYYFCRPVAVEAFEK-FTQDR 1027 VIAEGVETD Q +L GC QGY F PV + FE+ QDR Sbjct: 901 VIAEGVETDEQLDYLRHYGCDEIQGYLFSPPVPADKFEQILRQDR 945 >gi|300311453|ref|YP_003775545.1| signal transduction containing PAS/GGDEF/EAL domains protein [Herbaspirillum seropedicae SmR1] Length = 683 Score = 372 bits (955), Expect = e-104, Method: Compositional matrix adjust. Identities = 225/561 (40%), Positives = 330/561 (58%), Gaps = 20/561 (3%) Query: 467 QIEAELRISAVAFDS-REGMLITDANSRILRVNKAFTEITGYTAEEIVGKHPNLLRSDRH 525 QIEA+L A + E ++ D I N+ ++ GY+A E +G++ L + Sbjct: 116 QIEAKLEQQAQILNQMHESVITMDPAGFITSWNRGAEQLFGYSAMEAIGRNVLFLYENED 175 Query: 526 GPAFFQEMRESIRRFGKWQGEIWDRRKNGEVYPEWLTISAVKNKDHQITHYVSTHHDISD 585 ++ G + E+ R+K+GEV+ L++S +++++ + +DI++ Sbjct: 176 EEDSLHDL---FLEHGGREMEVRRRKKSGEVFWASLSLSVMRDQNGHPIGLIGYLNDITE 232 Query: 586 RKLAEERIRELAFFDALTRLPNRTLLLDRLKQAIALSLRTRTCGALLFIDLDHFKTLNDT 645 RK AE+ I LA++DALT LPNRTLL + QA+ + G ++FIDL+ FK +NDT Sbjct: 233 RKNAEKLIHHLAYYDALTGLPNRTLLTRTVDQALEEARHENLHGCVMFIDLNRFKPINDT 292 Query: 646 VGHEKGDVLLKQVAQRVVANVRENDTVARVGGDEFVVVLEGLNDTQQEAATQTRAIGEKI 705 +GH GD+LL +VA R+ +RE D VAR+G DEF V L G++ Q K+ Sbjct: 293 LGHVAGDMLLVEVAMRLRRALREQDVVARLGADEFAVALFGIDKDSPAYVAQ------KL 346 Query: 706 LAALGETYQLDDVEYRTTASIGATVFLGRAASVDELMKQADLAMYKAKETGRNS---LRF 762 LA + + +D E R ASIG +++ A + L++ AD+AMY+AK+ G N+ Sbjct: 347 LALFDDPFFIDGHELRVGASIGVSLYPENATDTETLLRLADIAMYRAKQGGENNEGGYAC 406 Query: 763 FDPAMQTAVLERATLEAGLRKAIESNQLLLHYQPQV-VDGGRVTGAEVLVRWQHPQRGMV 821 + M L+ +E GL A E N+LLL+YQP+V + +TGAE LVRWQHP+RG++ Sbjct: 407 YSEEMNRNTLDLLRIETGLLHAFEYNELLLYYQPKVDMQTLAITGAEALVRWQHPERGLL 466 Query: 822 PPGDFIPLAEETGLILSLGNWVLETACKQLAEWAKRARMDELSIAVNVSAPQLRE--PDF 879 PG+FIP+AEETGLI+ L +WVL+ C+Q W K A + + IA+NV+A + PD Sbjct: 467 LPGEFIPIAEETGLIVQLSDWVLDAVCRQARAW-KDAGLPPIRIALNVTAREFTRSLPDR 525 Query: 880 VQTVLDIIERTGANPRRLKLELTESLLVDNVEDIIQKMFALKAYGVEFSLDDFGTGYSSL 939 V L ER + L+LE+TES+L+ + + +I M + G+ SLDDFGTGYSSL Sbjct: 526 VGAAL---ERHMLSGEWLELEITESMLMHSTDRVISIMEKICGLGITVSLDDFGTGYSSL 582 Query: 940 SYLKRLPLNQLKIDQSFVRDVLIDPNDASIAKTIVNLAQSLGLGVIAEGVETDAQRSFLA 999 SYLKR P+N LKID+SF + D ND +IA I+ +A+ L VIAEGVE + Q +FL Sbjct: 583 SYLKRFPINTLKIDRSFTMGIPDDTNDCAIASAIIGIAKQLRHKVIAEGVEDEKQFNFLR 642 Query: 1000 DAGCHAYQGYYFCRPVAVEAF 1020 +AGC+ QGY F RPV F Sbjct: 643 EAGCNELQGYIFSRPVPAPDF 663 >gi|300312606|ref|YP_003776698.1| EAL domain transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 695 Score = 363 bits (932), Expect = e-101, Method: Compositional matrix adjust. Identities = 198/440 (45%), Positives = 280/440 (63%), Gaps = 8/440 (1%) Query: 589 AEERIRELAFFDALTRLPNRTLLLDRLKQAIALSLRTRTCGALLFIDLDHFKTLNDTVGH 648 A E + ++ D LTRLPNRTLL DRL QAI + R + AL+F+DLD FK +ND++GH Sbjct: 258 ANEELTQMVLHDQLTRLPNRTLLEDRLNQAINKAAREQGHFALMFMDLDGFKAINDSLGH 317 Query: 649 EKGDVLLKQVAQRVVANVRENDTVARVGGDEFVVVLEGLNDTQQEAATQTRAIGEKILAA 708 GD LL +VAQR+ ++ R NDTVAR+GGDEFV++++ LN T ++A + EK++ A Sbjct: 318 HVGDRLLVEVAQRLTSSSRANDTVARLGGDEFVILVD-LN-TPEDAM----GVAEKLVEA 371 Query: 709 LGETYQLDDVEYRTTASIGATVFLGRAASVDELMKQADLAMYKAKETGRNSLRFFDPAMQ 768 + + +++D E R +AS+G ++ A+ +L+ AD AMY K +GRN FF+P+M Sbjct: 372 VNQPFKVDQHELRVSASVGIAIYPEDGATRHDLVINADAAMYHTKRSGRNGYHFFEPSMN 431 Query: 769 TAVLERATLEAGLRKAIESNQLLLHYQPQV-VDGGRVTGAEVLVRWQHPQRGMVPPGDFI 827 ++ LR A+E Q L YQP+ + G V GAE L+RW+HP G+V P FI Sbjct: 432 ANAQQQLQWLQDLRVALERGQFRLVYQPKFSLPAGPVLGAEALLRWEHPVHGLVAPDQFI 491 Query: 828 PLAEETGLILSLGNWVLETACKQLAEWAKRARMDELSIAVNVSAPQLREPDFVQTVLDII 887 LAE +GLIL +G WVL+ AC+Q+ EW +D +++VN+SA Q +P ++ V + Sbjct: 492 GLAERSGLILPIGAWVLDEACRQMREWFALGYVD-WTMSVNLSALQFADPHLLEVVRTTL 550 Query: 888 ERTGANPRRLKLELTESLLVDNVEDIIQKMFALKAYGVEFSLDDFGTGYSSLSYLKRLPL 947 ER P L LE+TES + + E +Q + + GVE S+DDFGTGYSSL YLKRLP Sbjct: 551 ERHQLPPPCLTLEVTESTAMHDTEASLQTLRQIADLGVEISIDDFGTGYSSLLYLKRLPA 610 Query: 948 NQLKIDQSFVRDVLIDPNDASIAKTIVNLAQSLGLGVIAEGVETDAQRSFLADAGCHAYQ 1007 N+LKID+ FVR++ D DA+I IV L ++L L ++AEGVET Q+ FL AGC A Q Sbjct: 611 NELKIDRGFVRELRQDGEDAAIVSAIVALGRTLNLRIVAEGVETVEQQDFLTAAGCDALQ 670 Query: 1008 GYYFCRPVAVEAFEKFTQDR 1027 GY RP+ E F + ++R Sbjct: 671 GYLMGRPMTPELFLQTMRER 690 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.320 0.134 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 3,161,598 Number of extensions: 133110 Number of successful extensions: 562 Number of sequences better than 1.0e-08: 48 Number of HSP's gapped: 471 Number of HSP's successfully gapped: 48 Length of query: 1034 Length of database: 1,619,870 Length adjustment: 95 Effective length of query: 939 Effective length of database: 1,170,045 Effective search space: 1098672255 Effective search space used: 1098672255 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 135 (56.6 bits)