BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2249.p (793 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300312129|ref|YP_003776221.1| TonB-dependent ferric sideropho... 1480 0.0 gi|300312830|ref|YP_003776922.1| TonB-dependent siderophore rece... 255 1e-68 gi|300311652|ref|YP_003775744.1| TonB-dependent siderophore rece... 239 8e-64 gi|300313794|ref|YP_003777886.1| ferrichrome-iron receptor prote... 206 7e-54 gi|300310824|ref|YP_003774916.1| hydroxamate-type ferrisideropho... 186 5e-48 >gi|300312129|ref|YP_003776221.1| TonB-dependent ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 796 Score = 1480 bits (3831), Expect = 0.0, Method: Compositional matrix adjust. Identities = 732/796 (91%), Positives = 764/796 (95%), Gaps = 3/796 (0%) Query: 1 MKLLSHSVNWSSPKVIVLALATMTSLSVPVTSAYAQSAAAQSYHLPSAPLDQTLLQIAQR 60 MKL+SHSVNWSSPKVIV+ALATMTSLSVPVTSAYAQSAAAQSYHLPS PLDQTLL+IAQ+ Sbjct: 1 MKLISHSVNWSSPKVIVVALATMTSLSVPVTSAYAQSAAAQSYHLPSGPLDQTLLRIAQQ 60 Query: 61 SGLLISYEPSLVKSLQSAPVEGNFTATEAIKQALSNTGLELVATPSGKWTLRPVAA---T 117 SGLLISYEP+LVKSLQSAPVEGNFTA EAIK+ALSNTGLELVATPSGKWTLRPVA T Sbjct: 61 SGLLISYEPALVKSLQSAPVEGNFTAPEAIKKALSNTGLELVATPSGKWTLRPVAGASTT 120 Query: 118 SATEAQARKAVADAELPLISVAATADSGGTGFVAENSATFSRTDTPLSETPKSVSVINAA 177 S TE A KA+ADAELPLISVAATADSGGTGFVAE+SATFSRTDTPLSETPKSVSVINAA Sbjct: 121 STTETPAHKAIADAELPLISVAATADSGGTGFVAESSATFSRTDTPLSETPKSVSVINAA 180 Query: 178 VIQSQSAQTLSDVLRNASGVVTRPGPYGVPSFVIRGYAGTAPVMSDGLSAYGSAASPAAL 237 VIQSQSAQTLSDVLRNASGVV RPGPYGVPSF IRGY G APVMSDGLS+YGSAASPAAL Sbjct: 181 VIQSQSAQTLSDVLRNASGVVARPGPYGVPSFAIRGYVGNAPVMSDGLSSYGSAASPAAL 240 Query: 238 TPTIAIASVEVVKGPSAIMAADAPPGGVVNVIKKAPQVEPFHEVQVAYGSNNFSQVAFDS 297 TPTIAIA VEVVKGPSAIMAADAPPGGVVNVIKKAPQVEPFHEVQVAYGSN+FSQVAFDS Sbjct: 241 TPTIAIAGVEVVKGPSAIMAADAPPGGVVNVIKKAPQVEPFHEVQVAYGSNSFSQVAFDS 300 Query: 298 TGAIDEDKRLRYRFVVSADKSSENSMGYDGGHHFYIAPTLQWKDRSTDLTLGYSHTVTRD 357 TGAIDEDKRLRYRFVVSADKSSEN MGYDGG HFYIAPTLQWKDRSTDLTLGY+HTVTR+ Sbjct: 301 TGAIDEDKRLRYRFVVSADKSSENFMGYDGGRHFYIAPTLQWKDRSTDLTLGYAHTVTRE 360 Query: 358 PFPQYTVGYAKGGYVDGYIEHPLGNRGDDFSMTADELTAKLEQKLSDNLTFVSKNGYTST 417 PFPQYTVGYA+GGYVDGY+EHPLGNRGD FSMTADELTAKLEQKLSDNLTFVSKNGYTST Sbjct: 361 PFPQYTVGYARGGYVDGYVEHPLGNRGDHFSMTADELTAKLEQKLSDNLTFVSKNGYTST 420 Query: 418 TQGQNGWAAASTISKSNSLTLLGFKSSANYYTANSQNYLRLKSDLGSVKSTALVGVDYSY 477 TQGQ+GWAAAST++ SN+LTLLGFKSSANYYTANSQNYLRLKSDL VKST LVGVDYSY Sbjct: 421 TQGQDGWAAASTVTNSNALTLLGFKSSANYYTANSQNYLRLKSDLAGVKSTTLVGVDYSY 480 Query: 478 MHYAQYDRNSSSITTIPNIFGTINVAPISSPLTYQFGGQTQRVGSYLQEQLMYSNLTVLA 537 MHY QYDRNSSS TTIP+IFGTINVAPISSPLTYQFGGQTQRVGSYLQEQL+YSNLTVLA Sbjct: 481 MHYVQYDRNSSSTTTIPDIFGTINVAPISSPLTYQFGGQTQRVGSYLQEQLIYSNLTVLA 540 Query: 538 SIRRDSYLSSTNIVGRAPSGGLHQTAYSPSLGLMYQLTPEIAPYVNWNKGFQPNNVTTYS 597 SIRRDSYLSSTNIVGRAPSGG+HQTAYSPSLGLMYQLTPEIAPYVNWNKGFQPNNVT Y Sbjct: 541 SIRRDSYLSSTNIVGRAPSGGMHQTAYSPSLGLMYQLTPEIAPYVNWNKGFQPNNVTAYG 600 Query: 598 GGLLPPMQSEQFEAGVKFNLMDDKLNLTTALYHIDYTNQNIADPLHRGFYLPTGGAVSQG 657 GGLL P QSEQFEAGVKFNLMDDKL LTTALYHIDYTNQ+I+DP+HRGFY+ TGGAVSQG Sbjct: 601 GGLLAPKQSEQFEAGVKFNLMDDKLELTTALYHIDYTNQSISDPVHRGFYISTGGAVSQG 660 Query: 658 LEVELKGQIMPGMNVVAQYAYNNYVQNYAPTIKVNLPRHTGSIWTTYNFRSPALQGLGVG 717 LEVELKGQIMPG+NV+AQYAYNNYVQ+YAPT+KVNLP HTGSIWTTYNFRSPALQG GVG Sbjct: 661 LEVELKGQIMPGLNVIAQYAYNNYVQDYAPTVKVNLPHHTGSIWTTYNFRSPALQGFGVG 720 Query: 718 MGVFMSSGQDVGNTGNYHLPGQTETDLGLFYKMEKYSLNLSVKNLFNHKLYSSSTSATFI 777 MGVFMSSGQDVG+TGNYH+PGQTETDLGLFYKMEKYSLNLSVKNLFNHKLYSSSTSA+FI Sbjct: 721 MGVFMSSGQDVGSTGNYHVPGQTETDLGLFYKMEKYSLNLSVKNLFNHKLYSSSTSASFI 780 Query: 778 PMGPERTLMLTGTYDF 793 PMGPERTLMLTGTYDF Sbjct: 781 PMGPERTLMLTGTYDF 796 >gi|300312830|ref|YP_003776922.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 841 Score = 255 bits (651), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 242/864 (28%), Positives = 386/864 (44%), Gaps = 102/864 (11%) Query: 2 KLLSHSVNWSSPKVIVLALATMTSLSVPVTSAYAQSAAAQSYHLPSAPLDQTLLQIAQRS 61 +L++H + ++P + LA+ ++ AA + +P+ ++Q L+ IA+ + Sbjct: 8 RLMAHCLA-ATPAL--LAVTCAPTVQAAAAGLVQPQAALFDFQVPAGTMEQALVAIARSA 64 Query: 62 GLLISYEPSLVKSLQSAPVEGNFTATEAIKQALSNTGLELVATPSGKW-TLRPVAATSAT 120 G ++ ++P+ L A V+G FT A++QAL+ + LELV+ P G + LR + + Sbjct: 65 GGIVLFDPAAAARLNCAGVQGRFTLEAALRQALAGSPLELVSHPDGSFGVLRASVPAALS 124 Query: 121 EAQARKAVADAELPLISVAATADSGGT-------GFVAENSATFSRTDTPLSETPKSVSV 173 A + LP + + D+G T GF+A S +R + PLS P S+ Sbjct: 125 ADPATPEHYNPPLPPVLRSGQRDAGDTSHGYADSGFLATESRLATRNEMPLSSLPVSLQE 184 Query: 174 INAAVIQSQSAQTLSDVLRNASGV-------VTRPGPYGVPSFVIRGYAGTAPVMSDGL- 225 I +I+SQ +Q++ L+N S V V + G V SFV APVM DG Sbjct: 185 ITGGLIESQQSQSVVSSLQNISSVAYGRGDGVDQAGTLYVRSFV-------APVMRDGWG 237 Query: 226 -----------SAYGSAASPAALTPTIAIASVEVVKGP-SAIMAADAPPGGVVNVIKKAP 273 GS A + PT AI VEV+ G S I+ PGG VN++ K P Sbjct: 238 DLVSLVNATNGRVSGSRAITSLDVPTAAIERVEVLGGADSIIVGGPMEPGGSVNIVTKQP 297 Query: 274 QVEPFHEVQVAYGSNNFSQVAFDSTGAIDEDKRLRYRFVVSADKSSENSMGYDGGHHFYI 333 + E+ + + A D G++ D+ YR +VS GYDG FY+ Sbjct: 298 VADTLRELTLEVDQRGHRRSALDLGGSLSADRAWTYRTIVSVTHDKRTLDGYDGAREFYL 357 Query: 334 APTLQWKDRSTDLTLGYSHTVTRDPFPQY-TVGYAKGGYVDGYIEHPLGNRGDDFSM-TA 391 AP+L +KD ST + G SH V R PF Y + + G P G R DD S+ T Sbjct: 358 APSLGYKDASTSVVAGLSHQVARTPFGGYQSALLGENGPGPDLRSAPWG-RADDRSLATK 416 Query: 392 DELTAKLEQKLSDNLTFVSK----------NGYTSTT-----QGQNGWAAASTISKSNSL 436 EL + EQ L ++ F S+ GYT+ G A ++ +++S+ Sbjct: 417 TELFYRWEQALGEDWRFTSRARINRLRYRAAGYTNCAPVDLDAGTGVCVADQSLLQTDSI 476 Query: 437 TLLGFKSSANYYTANSQNYLRLKSDLGSVKSTALVGVDYSYMHYAQY-DRNSSSITTIPN 495 +L N + K G + + G +S Y D ++S +P Sbjct: 477 SL--------------DNNVSYKIVSGPWQHRIMAGASFSRTRLRSYSDGDNSVAVNVPW 522 Query: 496 IFGTINVAPISSPLTYQFGGQTQRVGS-YLQEQLMYSNLTVLASI----RRDSYLSSTNI 550 + P+S + G + YLQ+Q+ + L + R+++ S + Sbjct: 523 PPSQAALPPLSGQPSLTGGDDAIYTSNLYLQDQITWQRWYALINAGYERERNNFSSDVDA 582 Query: 551 VG--RAPSGGLHQTAYSPSLGLMYQLTPEIAPYVNWNKGFQPNNVTTYS--GGLLPPMQS 606 G R S + Y +LGL Y+L+ Y N+ + F P V S G P + S Sbjct: 583 DGVLRDTSPPRNVPVY--NLGLAYRLSQNATLYANYFRSFTPGQVLLDSSLNGSRPGINS 640 Query: 607 ------EQFEAGVKFNLMDDKLNLTTALYHIDYTN------QNIADPLHRGFYLPTGGAV 654 E G+K L++ + T AL+ +TN + + PL+R LP+ AV Sbjct: 641 APATTGRSAEIGLKLELLERRAVFTAALFRATHTNVLQSVFADASAPLNRYVLLPS--AV 698 Query: 655 SQGLEVELKGQIMPGMNVVAQYAYNNYVQNYAPTIKVNL---PRHTGSIWTTYNFRSPAL 711 S+GLE+ L G++ G N++A Y+Y+ + P L P H S+W+TY+ +S A Sbjct: 699 SRGLELNLSGRLARGWNLIASYSYSLFHPAPGPEQDSRLGQFPHHRASLWSTYDLQSEAW 758 Query: 712 QGLGVGMGVFMSSGQDVGNTGN--YHLPGQTETDLGLFYKMEKYSLNLSVKNLFNHKLYS 769 +G G G+G+ SG + + + GQT TD L+Y+ L ++NLF+ +L+S Sbjct: 759 RGWGFGLGMTARSGYTAVSDADTQVRIGGQTRTDASLYYRRPGSRTTLGIRNLFDRRLFS 818 Query: 770 SSTSATFIPMGPERTLMLTGTYDF 793 + I + P RTL LT +F Sbjct: 819 DFAT-NLIGVEPGRTLTLTHIIEF 841 >gi|300311652|ref|YP_003775744.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 832 Score = 239 bits (609), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 219/805 (27%), Positives = 367/805 (45%), Gaps = 71/805 (8%) Query: 30 VTSAYAQSAAAQSYHLPSAPLDQTLLQIAQRSGLLISYEPSLVKSLQSAPVEGNFTATEA 89 VT A A + +++ + PL+ L + A+++G+ +SY +LV+ Q ++G ++ ++ Sbjct: 58 VTQAQGAPEARRHFNVAAGPLEDALNRFARQAGITMSYASALVQGRQVTALQGEYSVSQG 117 Query: 90 IKQALSNTGLELVATPSGKWTLRPVAATSATEAQARKAVADAELPLISVAATADSGGT-- 147 ++ L+ +GL V + +G + L+P+ + + + + I+V+ D G Sbjct: 118 LEVLLAGSGLRAVRSDNGAYALQPLVQGAPEQVDTLHRLGN-----ITVSGRRDEPGAAD 172 Query: 148 ---GFVAENSATFSRTDTPLSETPKSVSVINAAVIQSQSAQTLSDVLRNASGVVTRP--- 201 G+VA SAT ++TDTPL E +SVSV+ A ++++ A ++ DVLR G T Sbjct: 173 PVEGYVALRSATATKTDTPLLELAQSVSVVTRAEMEARGANSILDVLRYMPGANTETHGV 232 Query: 202 GPYGVPSFVIRGYAGTAPVMSDGLSAYGSAASPAAL--TPTIAIASVEVVKGPSAIMAAD 259 P G F +RG+ A S+ L+ S + T T + VEV++G ++ Sbjct: 233 DPRGYDYFNLRGFI-NAQTTSNYLNGLRQIPSGFGMFRTETYGLERVEVLRGANSASFGQ 291 Query: 260 APPGGVVNVIKKAPQVEPFHEVQVAYGSNNFSQVAFDSTGAIDEDKRLRYRFV---VSAD 316 A PGGVVN + K +E+ V GS QVA D +G +D + R++ R V + D Sbjct: 292 ADPGGVVNRVSKLAGSGARNELMVDVGSFQRRQVAADLSGDLDPEGRVQARLVGLLLDGD 351 Query: 317 KSSENSMGYDGGH-HFYIAPTLQWK-DRSTDLTLGYSHTVTRDPFPQYTVGYAKGGYVDG 374 + G G + Y+AP+L+ + T L L + R ++T A G Sbjct: 352 TQFRYANGRAGDNDRLYLAPSLKIRPSADTSLILLAEYLKDRSGSGRWTAVRADGSQTHT 411 Query: 375 YIEHPLGN--RGDDFSMTADELTAKLEQKLSDNLTFVS-------KNGYTSTTQGQ-NGW 424 + P + RG+ +S L LE +L T ++ Y + G NG Sbjct: 412 LLGDPDFDQQRGEQWS-----LGWMLEHRLDATWTLRQHFRQAALRSQYAAVNPGSFNG- 465 Query: 425 AAASTISKSNSLTLLGFKSSANYYTANSQNYLRLKSDLGSVKSTALVGVDYSYMHYAQYD 484 S +S+S ++ + + ++Q R++ G + L+G+D+S+M + + Sbjct: 466 ---SILSRSTAV----YDTQVENTLLDNQALARVQ--WGQAEHQVLLGLDWSHM--SARE 514 Query: 485 RNSSSITTIPNIFGTINVAPISSPLTYQFGGQTQ---RVGSYLQEQLMYSNLTVLASIRR 541 + + +I + PI + T +FG Q + G Y Q+Q+ Y + + R Sbjct: 515 QRYRGVAPSLDIDNPVYTQPIPAATT-RFGDLDQTLVQTGLYAQDQIRYQRIVLTLGARY 573 Query: 542 DSYLSSTNIVGRAPSGGLHQTAYSPSLGLMYQLTPEIAPYVNWNKGFQPNNVTTYSGGLL 601 D ST + A+S +GL Y ++PE+APYV++ F P G Sbjct: 574 DRSRDSTRNAANNSLQAAEENAFSGRVGLSYLVSPELAPYVSYGSSFLPQAGQDVDGKPF 633 Query: 602 PPMQSEQFEAGVKFNLMDDKLNLTTALYHIDYTNQNIADPLHRGFYLPTGGAVSQGLEVE 661 + Q EAGVK+ + T ALY + N +DPLH F + G S+G+E+E Sbjct: 634 KAATARQIEAGVKYQPGHGRAVYTAALYQLVKDNALGSDPLHANFSVSNGQVRSRGVELE 693 Query: 662 LKGQIMPGMNVVAQYAYNNYV--QNYAPTI----KVNLPRHTGSIWTTYNFRSPALQGLG 715 KG+++PG+NV A Y Y V QN AP + + +PR S+W Y + L G+G Sbjct: 694 AKGELLPGLNVTAAYTYAQVVNTQNAAPELIGKTPILVPRQAASLWLDYTVQRGDLAGMG 753 Query: 716 VGMGV------FMSSGQDVGNTGNYHLPGQTETDLGLFYKMEKYSLNLSVKNLFNHKLYS 769 VG G + ++ V N L D G + +Y+ N+S NL N + S Sbjct: 754 VGAGARYTGRNYATAANTVENAAQVILDAMVRIDRGPW----RYAFNVS--NLANRQYTS 807 Query: 770 SSTSATFIPM-GPERTLMLTGTYDF 793 T PERT +L+ Y + Sbjct: 808 CLAEPTLTCFWAPERTAVLSARYRW 832 >gi|300313794|ref|YP_003777886.1| ferrichrome-iron receptor protein [Herbaspirillum seropedicae SmR1] Length = 817 Score = 206 bits (524), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 227/836 (27%), Positives = 376/836 (44%), Gaps = 91/836 (10%) Query: 12 SPKVIVLALATMTSLSVPVTSAYAQSAAAQSYHLPSAPLDQTLLQIAQRSGLLISYEPSL 71 SP+ LA A M VT+A A Q + +P PL+Q L + AQ + + ++ + Sbjct: 19 SPRWWPLAPALM------VTAALHAQAVQQRFDIPPGPLEQVLARFAQAADVPLALQSGK 72 Query: 72 VKSLQSAPVEGNFTATEAIKQALSNTGLELVATPSGKWTLRPVAATSATEAQARKAVADA 131 ++ S + G+++ L+ +G + T SG + L P A+ +AT + A A Sbjct: 73 LQGQHSPGLAGSYSVQAGFDALLAGSGYRIGKTASG-YVLVP-ASEAATPSAATTPAASG 130 Query: 132 ELPLISVAATADSGGTGFVAENSATFSRTDTPLSETPKSVSVINAAVIQSQSAQTLSDVL 191 LP I ++A+AD G + A +SA+ ++T TPL E P+S+SV+ A I + A T D L Sbjct: 131 SLPAIQISASADPGEQRWTARDSASTTKTATPLIEVPQSISVVTAERIAAMGATTARDAL 190 Query: 192 RNASGVVTRPGPYGVPS----FVIRGYAGTAP-VMSDGLSAYGSAASPAALTPTIAIASV 246 GV PYG S +RG+ +P DGL + + T I + Sbjct: 191 GYTPGVNI--SPYGSDSRYDWINLRGFDAYSPGFYLDGLPLRNANSFAVWRTENYGIEQL 248 Query: 247 EVVKGPSAIMAADAPPGGVVNVIKKAPQVEPFHEVQVAYGSNNFSQVAFDSTGAIDEDKR 306 V++GP++++ A PGGVVNV+ K P + E+QV GS+ QV D GAID D R Sbjct: 249 AVLRGPASVLYGQAGPGGVVNVVSKLPSADAPRELQVQLGSDRRRQVGADIGGAIDADGR 308 Query: 307 LRYRFVVSADKSSENSMGYDGGHHFYIAPTLQWK-DRSTDLTL--------GYSHTVTRD 357 L YR V+ + +E G Y+AP+L WK +T LTL G +T TR Sbjct: 309 LLYR-VIGVVRDAELPAGGMKNDRLYLAPSLVWKISAATSLTLQAALLRDQGGVYTRTR- 366 Query: 358 PFPQYTVGYAKGGYV--DGYIEHPLGNRGDDFSMTADELTAKLEQKLSDNLTFV--SKNG 413 P V A G + + Y +P D FS + +L + + F ++ G Sbjct: 367 PLVGSLVPTAIGTTIPSELYTGNP---HFDHFSQDQELFGYRLAHRFDERFAFTQSARVG 423 Query: 414 YTSTTQGQNGWAAASTISKSN----------SLTLLGFKSSANYYTANSQNYLRLKSDL- 462 + ST +T++ +N + L G + SA ++ ++Q L++D Sbjct: 424 HMSTDYRAVQTPRFATLNAANPNDPVNFQNLTRNLFGSRESATMFSIDNQ----LQADFS 479 Query: 463 -GSVKSTALVGVDYSYMHYAQYDRNSSSITTIPNIFGTINVA-------PISSPLTYQFG 514 G+V+ T L GVDY +++D S S + P +N+A P P Y Sbjct: 480 TGAVRHTVLAGVDY---QRSRFDAVSFSGGSAP----LLNIAAPSYPNGPFVVPAPYSDN 532 Query: 515 GQT-QRVGSYLQEQLMYSN-LTVLASIRRDSYLSSTNIVGRAPSGGLHQTAYSPSLGLMY 572 + G YLQ+Q+ ++N V R DS S+ + ++ ++Y Sbjct: 533 RAVLTQTGIYLQDQIKWNNGWEVTLGGRHDSASSTVDNRLDGSRTSSTDRKFTRRAAVLY 592 Query: 573 QLTPEIAPYVNWNKGFQP----NNVTTYSGGLLPPMQSEQFEAGVKFNLMDDKLNLTTAL 628 +APY+++ + F P N +T S G P +Q E G+++ + AL Sbjct: 593 HAANGLAPYLSYTESFNPTATVNPLTNQSFG---PETGKQTEVGLRYQPPGTNDLYSAAL 649 Query: 629 YHIDYTNQNIADPLHRGFYLPT--GGAVSQGLEVELKGQIMPGMNVVAQYAYNNYVQNYA 686 + D QN + ++PT G +GLE+E Q M + + A Y+Y A Sbjct: 650 F--DLKRQNYIS--YDANFMPTQKGEIAVRGLELEAVTQPMAALRLTAAYSYTPRAVVTA 705 Query: 687 PTIKVNLPR-------HTGSIWTTYNFRSPALQGLGVGMGV-FMSSGQDVGNTGNYHLPG 738 + + + H S+W + + G+ +G+G ++S+ G +PG Sbjct: 706 SSRPAEIGKQAAAVLLHQFSVWGDHRLGN----GVRLGLGARYVSATSGNGGGTPVKVPG 761 Query: 739 QTETDLGLFYKMEKYSLNLSVKNLFNHK-LYSSSTSATFIPMGPERTLMLTGTYDF 793 T D L Y ++SL L+++NL + + L + T+A+ G +R+++ T +Y + Sbjct: 762 YTLLDGLLGYDFARWSLALNLRNLTDKRYLTNCDTTASMCYYGDQRSVLATASYRW 817 >gi|300310824|ref|YP_003774916.1| hydroxamate-type ferrisiderophore receptor signal peptide protein, tonB-dependent receptor [Herbaspirillum seropedicae SmR1] Length = 715 Score = 186 bits (473), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 186/693 (26%), Positives = 313/693 (45%), Gaps = 57/693 (8%) Query: 133 LPLISVAATADSGGTGFVAENSATFSRTDTPLSETPKSVSVINAAVIQSQSAQTLSDVLR 192 LP +SV TAD +++ TPLSETP+S+SV+ A++ SQ A +LSD L+ Sbjct: 48 LPTVSV--TADGYTDSKFKATQTQVNKSSTPLSETPQSISVVTRAMMDSQQAVSLSDALK 105 Query: 193 NASGVVTRP-GPYGVPSFVIRGYAGTAPVMSDGLSAYGSAASPAALTPTIAIASVEVVKG 251 N SGVV + G G +IRG + + DGL + AS + VEV+KG Sbjct: 106 NVSGVVAQQYGRRGWDDLIIRGQVASDSLYLDGLR---TTASSRVAEQLYGLQQVEVLKG 162 Query: 252 PSAIMAADAPPGGVVNVIKKAPQVEPFHEVQVAYGSNNFSQVAFDSTGAIDEDKRLRYRF 311 P +++ PGG+VN++ K PQ F V V GS++ Q D ++ E+ + +R Sbjct: 163 PGSLLYGLVLPGGLVNMVSKRPQGSDFANVDVTIGSHDLYQSTVDLNKSLSENGKQAFR- 221 Query: 312 VVSADKSSENSMGYDGGHHFYIAPTLQWK-DRSTDLTLGYSHTVTRDPFPQYTVGYAKGG 370 + +S+++ + + YIAP+L TD T+ S+ R+ Q G G Sbjct: 222 INGLISNSDDATDHVWFKNRYIAPSLSLDLGARTDFTILTSYQ-ERNYVRQQ--GLPLSG 278 Query: 371 YVDGYIEHPLGNRGDDFSMTADELTAKLEQKLSDNLTFVSKNGYTSTTQGQNGWAAASTI 430 + PL S+ E A+ + N T + GY+ T + +GW + + Sbjct: 279 SITPNASGPLAR-----SLFIGEPGAR---PYAANETRI---GYSLTHRFDDGWTLNNNL 327 Query: 431 SKS-----------NSLTLLGFKSSANYYTANSQNYL---RLKSDLGSVKSTALVGVDYS 476 N+LT SA T Q + ++ + V + Sbjct: 328 RYQQFTMSGQLISINNLTGTSLTRSAMDQTFEGQTFTMDTNVQRSFATAWGKHEVTLGTD 387 Query: 477 YMHYAQYDRN-SSSITTIPNIF----GTINVAP--ISSPLTYQFGGQTQRVGSYLQEQL- 528 YM+ + +R + S+T + NI+ G V P ++S + G Y ++++ Sbjct: 388 YMNSRELERTLTCSVTPLSNIYNPSYGARVVCPTQLTSTNAKLNDTSVRDTGFYARDKIS 447 Query: 529 MYSNLTVLASIRRDSYLSSTNIVGRAPSGGLHQTAYSPSLGLMYQLTPEIAPYVNWNKGF 588 + +LA +R+D + T +A + S +M +L + PY+++ F Sbjct: 448 LGERWQLLAGVRQDRAATYTTSALTGSHSDNASSATTASAAIMVELWHGVRPYLSYATSF 507 Query: 589 QPNNVTTYSGGLLPPMQSEQFEAGVKFNLMDDKLNLTTALYHIDYTNQNIADPLHRGFYL 648 PN+ T + G + P +Q+E GVK +L + + ++ AL+ + N + DP H + + Sbjct: 508 YPNSGTAFDGSIFKPETGKQWETGVKVDLDEGRTSINFALFDLRRRNVLVTDPDHTSYKM 567 Query: 649 PTGGAVSQGLEVELKGQIMPGMNVVAQYAYNNYV-----QNYAPTIKV---NLPRHTGSI 700 GG SQG E+ + + G+++ A Y+Y + + T+ N+PRH + Sbjct: 568 AIGGQRSQGGEISVTSDLRNGLSLNAAYSYTAAIVIDDGGQRSTTVGQWLDNVPRHNFTT 627 Query: 701 WTTYNFRSPALQGLGVGMGVFMSSGQDVGNTGNYHLPGQTETDLGLFYKMEKYSLNLSVK 760 Y F S L G + GV GQ + T Y LPG D+G+ Y E++ L+VK Sbjct: 628 SARYRF-SGELSGWELNGGV---RGQSMMRTNGYTLPGYVLADIGVAYNAERWRTALNVK 683 Query: 761 NLFNHKLYSSSTSATFIPMGPERTLMLTGTYDF 793 N+FN + Y+ + +G +RT+MLT Y + Sbjct: 684 NVFNTEYYAGGLGKA-VALGDDRTVMLTLGYRY 715 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.313 0.129 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,441,845 Number of extensions: 103248 Number of successful extensions: 362 Number of sequences better than 1.0e-08: 20 Number of HSP's gapped: 315 Number of HSP's successfully gapped: 23 Length of query: 793 Length of database: 1,619,870 Length adjustment: 93 Effective length of query: 700 Effective length of database: 1,179,515 Effective search space: 825660500 Effective search space used: 825660500 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 134 (56.2 bits)