BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2207.p (4172 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311658|ref|YP_003775750.1| non-ribosomal peptide synthetas... 251 7e-67 gi|300311697|ref|YP_003775789.1| acyltransferase family protein ... 191 1e-48 gi|300312041|ref|YP_003776133.1| acyl-CoA synthetase/AMP-acid li... 119 4e-27 gi|300311251|ref|YP_003775343.1| 3-oxoacyl-[acyl-carrier-protein... 101 1e-21 gi|300311248|ref|YP_003775340.1| malonyl CoA-[acyl-carrier-prote... 92 1e-18 >gi|300311658|ref|YP_003775750.1| non-ribosomal peptide synthetase [Herbaspirillum seropedicae SmR1] Length = 9160 Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 200/548 (36%), Positives = 271/548 (49%), Gaps = 31/548 (5%) Query: 36 SRQQRLSYGELSERVRAHAAALQQRWTPGTVALILFPSGLDYVVSLLACFYAGIIAVPVN 95 S ++R S+ +L R RA+AAA QQR G L++ + YV + L C YAG++AVPV Sbjct: 49 SGERRFSFAQLDLRARAYAAAFQQRCPRGARVLLVLENDEHYVQAFLGCLYAGMVAVPVF 108 Query: 96 LPGAAR---VKRVLAKIDAISDDCKPAFVLTGETIEQASGDELKQFAARQAMDIVHLESL 152 P + R +KR+ C V+ E + Q Q A A +++ E + Sbjct: 109 PPESVRPQHLKRLAGIAADAQAAC----VVLPEPLRQTCA----QAALFGAAELLAAEQV 160 Query: 153 V-ADAAAWQRPDALNAQAIAFLQYTSGSTGLPKGVVNRHGQLLHNIQFQRRLLAPQGQSC 211 ADA W R Q IAFLQYTSGST PKGV+ HG L+ N + + Sbjct: 161 ADADAVHW-REHTPQPQDIAFLQYTSGSTSAPKGVMVSHGNLMANEAAISACMRVREDDI 219 Query: 212 TVASWLPLFHDLGLIMGILAPLALGGRALYMPPMSFVAAPLDWLLLASRERATVLPCPSF 271 V +WLPL+HD+GLI G+L L G + + P F+ PL WL L +R R TV P F Sbjct: 220 FV-TWLPLYHDMGLIGGLLQGLVRGLKTVLCSPRYFLERPLRWLELVARHRGTVSGGPDF 278 Query: 272 ALRSCVSALATATPQQRRELDLSSVHCLMPAAEPVLPVHVQGFIDAFAPYGLTATAMRPA 331 A R CV + P Q +DLSS AEP+ FI+ F+ G +A A P Sbjct: 279 AYRLCVERI---KPAQLPGVDLSSWRVAFCGAEPLRADTFPAFIERFSVAGFSADAAYPC 335 Query: 332 YGLAEATLVVSANT-HDRGPCLLAVDRQAIERDIVLPHPPQERARWYVGNGDDFGAQEVL 390 YGLAEATL+VS H A R V P R V GD EV Sbjct: 336 YGLAEATLIVSGGPPHGAHATAFHTAELAAGR-AVEGGPDDTR---LVACGDIAPHHEVR 391 Query: 391 IVDPEHKRCLGQDKVGEIWVRGPSVAGGYWGKNQNDEAFAGTLVDAAPGEHPFLRTGDMG 450 I+ E R VGEI V GPSV GYW + Q A V+ +LRTGD+G Sbjct: 392 II--EDGRVQQDGAVGEIEVCGPSVTQGYWQRPQES---AAAFVER--DGRRWLRTGDLG 444 Query: 451 FLHEGQLFVTGRRKDMMIFRGQCHYPNDIEASASQCHALAVEDSAAAFSLSDDSGEDRLV 510 FL +GQL++ GRRKD++I RGQ YP DIE + + AAF+++ GE + Sbjct: 445 FLRDGQLYIAGRRKDLIIVRGQNVYPQDIERAVEDQVEAVRKGRVAAFAVNTGDGEG-IG 503 Query: 511 IVQEVRKSAQAQSSDYADLAATIRQTVAQEHQLSAHAIILIRKGTLPRTTSGKIRRRTVR 570 + E+ + Q ++ A +A+ I + VAQ + +IL+ G LP+T+SGK++R R Sbjct: 504 VAAEISRGMQKLAAPGA-IASAIAEAVAQASLEAPQVVILLNPGGLPKTSSGKLQRSACR 562 Query: 571 QSYLAREL 578 + EL Sbjct: 563 SGWRNGEL 570 Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 268/920 (29%), Positives = 388/920 (42%), Gaps = 95/920 (10%) Query: 2213 RHGALRIVIG-SDGL--QRILPQTPHYAIQVA--DCRQHSQAQTDALQTQWRQAMSHQVM 2267 RH LR +DGL Q+ +P P +Q+A D RQ Q + + QA + V Sbjct: 5247 RHAILRTRFAETDGLPYQQAVPPFP---VQLAWLDLRQLPPQQREQRLQEELQAAAAHVF 5303 Query: 2268 DSQQWPLFDVRVMHCPEGRSRLFIGIDMLINDATSGQILWEELAALY-QADGDAQAAGLR 2326 D Q DVR++ L IG+ +++DA S ++ +LA Y QA D QA L Sbjct: 5304 DLGQAGQLDVRLIALGPQEHVLVIGMHHIVSDAWSNPLVIRDLAEAYRQARRDGQAQ-LP 5362 Query: 2327 PFSISFRDYIQAKYQHSTARQAAREQARQFWLEQLPSLPAAPQLPLRHEALQQHQPRFSR 2386 + + DY A +Q + A ++W + L + ++ LP +PR +R Sbjct: 5363 ALPMQYADY--AHWQRQRVQGAWLADELRYWDDYLGPVNSSLDLP-------TDRPRPAR 5413 Query: 2387 RQHRLDAHQW---SRLREQAASV----NCTPAALLITAFAEVLAAWSSEKRFTLNLTTFD 2439 + R H + S L +Q + +CTP L+ A+ +L+ +S + F + Sbjct: 5414 QSFRGAVHAFTLDSALAQQMQAFCRAQHCTPFVALMAAWQVLLSRYSGQSDFLVGAPNAG 5473 Query: 2440 RLPWHEDVPHLLGDFTAVTLLPLDLSSRSGFAQRAAAVNGSILGYLQHRAFSAVDVLREW 2499 R H ++ L+G F L L+ + V G +L L+H +L Sbjct: 5474 RN--HAELQDLVGFFVTTQLYRARLTPELTVRELVRQVRGDMLAALEHGDLPFEALLEHR 5531 Query: 2500 NRGRERAEALSMPVVFTSQL---GMSDPTKGAARQSPL----GEVVYGISQTPQVWLDHQ 2552 R+ V+F Q+ G S +PL + +S +V Sbjct: 5532 KVERDPGRNPLFQVMFGLQMVGEGASALAFDDIVTAPLPLAQDSAKFDLSLDVKVIKGEV 5591 Query: 2553 ACEQEGALVFNWDVIDDLFLPGVVDAMFDAYCTLLHYLAADPAHWETALPAMLPLRQQQV 2612 C E A DLF + AM Y LL A P L + Q ++ Sbjct: 5592 HCRLEYA--------SDLFDAATIAAMAGHYRNLLRGFAEAPERPVAQLALLDQDEQARL 5643 Query: 2613 RQ----AVNDTPAPLPQACLDQLFFSRAQQQPEQLALVSREGQWRYGQLAQWAQRLSQAL 2668 R + + P A L L ++A P+ +A+V Q Y QL + A RL+ L Sbjct: 5644 RSWGDPQLREALPPTSSASLAGLIEAQAAAIPDAVAVVCGPQQMSYAQLNRAANRLAHRL 5703 Query: 2669 LAAGVRPGDRVAVLMQKCSQQVAACLAIQQCGAAYVPVDSSTPASRLHSILAGSTIRVVL 2728 L GV DR+ + + + + LAI + GAAYVP+D PA RL ++ Sbjct: 5704 LQQGVGLEDRIGLAAPRSLEMIVGLLAILKAGAAYVPLDPDYPADRLAYMV--------- 5754 Query: 2729 SRSAERAHVQSLLDGQETILLEADEDQLASY-----------PAHTPEAPRNLHDAAYVI 2777 A R H +DG+ + L A + PAH P + + AY+I Sbjct: 5755 --QACRRHPG--VDGRARVSLPGPRKACAHWRSPRPWADDAAPAHNPGVVLHPDNLAYII 5810 Query: 2778 YTSGSTGTPKGVLIDHMGAANTVLDINRRFGITAGDKVLGLSSLYFDLSVYDIFGTLAAG 2837 YTSGSTG PKG + H + F D S FD SV++IFG L G Sbjct: 5811 YTSGSTGRPKGAQLSHANVLRLLGQTAAWFDFGREDVWTLFHSYAFDFSVWEIFGALCYG 5870 Query: 2838 GTLVLPDHDKVRDPGHWLRLVQEHGVTVWNSVPALLELLLD--SAEQSGQSLPGLRHVLL 2895 G LV+ R P +L L+ E VTV N P+ LL + Q LR V+ Sbjct: 5871 GRLVVVPFAVSRSPEDFLALLVEQRVTVLNQTPSAFRQLLQLPALRQLPSEALALRTVIF 5930 Query: 2896 SGD---------WISLGLPPRLRQAAPASQLIAMGGATEASIWSNWFAVQEVAAHWRSIP 2946 G+ WI+ + PA LI M G TE ++ + + P Sbjct: 5931 GGEALEPEMLRPWIT-----QFGDQRPA--LINMYGITETTVHVTYRRLLRADLDASRSP 5983 Query: 2947 YGKPLSNQAYHVLDAHGQPCPDYVTGDLYIAGIGLAVGYENDAQKTADSFIHMP------ 3000 G + + +VLD P V G+LY++G GLA GY N A +A+ F+ P Sbjct: 5984 IGAAIPDLGLYVLDQQLNLAPAGVPGELYVSGAGLARGYLNRAALSAERFVANPFARAGE 6043 Query: 3001 DGQRLYRTGDLARYWTDGNLEFLGRRDFQVKIAGNRIELGDIEAALLRCPGVREAVVDTI 3060 +G RLYRTGDL R+ DG +++LGR D QVKI G RIELG+IEA LL PGV A V Sbjct: 6044 EGSRLYRTGDLVRWRHDGQMDYLGRIDQQVKIRGFRIELGEIEAQLLAQPGVGAATVMVR 6103 Query: 3061 GTPPQLRLAAWVVPQGGPSP 3080 RL ++ PQ G +P Sbjct: 6104 QDAATPRLVGYLSPQAGIAP 6123 Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 167/444 (37%), Positives = 233/444 (52%), Gaps = 20/444 (4%) Query: 2625 QACLDQLFFSRAQQQPEQLALVSREGQWRYGQLAQWAQRLSQALLAAGVRPGDRVAVLMQ 2684 Q + +LF +A ++P+ +AL + W YGQL A L++ L AAGV P VA+L + Sbjct: 2643 QEPVHRLFEQQASRRPDAIALQADGAHWTYGQLNAAANALARRLQAAGVGPDTVVALLAE 2702 Query: 2685 KCSQQVAACLAIQQCGAAYVPVDSSTPASRLHSILAGSTIRVVLSRSAERAHVQSLLDGQ 2744 + + V A LA+ + G AY+P+D PA RL +L + +LS + L Sbjct: 2703 RSAAMVTALLAVLKAGGAYLPLDPDYPAERLAWMLEDARPVCLLSHRG----LHRRLALP 2758 Query: 2745 ETILLEADEDQLAS---------YPAHTPEAPRNLHDAAYVIYTSGSTGTPKGVLIDHMG 2795 +T+LLE EDQL P H P+ P + AYVIYTSGSTG PKG H Sbjct: 2759 DTLLLEL-EDQLPGSQRGDEPQYNPQHNPQPPLHGEHLAYVIYTSGSTGRPKGAGNSHRA 2817 Query: 2796 AANTVLDINRRFGITAGDKVLGLSSLYFDLSVYDIFGTLAAGGTLVLPDHDKVRDPGHWL 2855 N + + + + + GD VL + FD+SV++ L G LV+ RDP Sbjct: 2818 LYNRLRWMQQAYALQEGDAVLQKTPFGFDVSVWEFLWPLMTGARLVMAPPGAHRDPAELA 2877 Query: 2856 RLVQEHGVTVWNSVPALLELLLDSAEQSGQSLPGLRHVLLSGDWISLGLPPRLRQAAPAS 2915 L++EHGV+ + VP++L+ L S + + + LR V+ SG+ + + P + Sbjct: 2878 ALIREHGVSTLHFVPSMLQAFLASGQAAACT--SLRQVICSGEALPAEARDQFFALLPQA 2935 Query: 2916 QLIAMGGATEASIWSNWFAVQEVAAHWRSIPYGKPLSNQAYHVLDAHGQPCPDYVTGDLY 2975 L + G TEA+I + Q +P G+P+S VLDA P V G+LY Sbjct: 2936 ALHNLYGPTEAAIDVTHWTCQH--GDRGPVPIGQPISGLRAVVLDADLNVLPCGVAGELY 2993 Query: 2976 IAGIGLAVGYENDAQKTADSFIHMPDGQ--RLYRTGDLARYWTDGNLEFLGRRDFQVKIA 3033 + GIGLA GY TA+ F+ P GQ RLYRTGDL R+ DG +++LGR D QVKI Sbjct: 2994 LGGIGLARGYLGRPGLTAERFVASPFGQGERLYRTGDLVRWREDGQIDYLGRLDHQVKIR 3053 Query: 3034 GNRIELGDIEAALLRCPGVREAVV 3057 G RIELG+IEA LL V EAVV Sbjct: 3054 GLRIELGEIEAQLLALDEVEEAVV 3077 Score = 221 bits (564), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 167/463 (36%), Positives = 235/463 (50%), Gaps = 37/463 (7%) Query: 2654 YGQLAQWAQRLSQALLAAGVRPGDRVAVLMQKCSQQVAACLAIQQCGAAYVPVDSSTPAS 2713 Y L Q A RL+ LLA G P V V ++ + V A LA+ + GAAY+P+D P + Sbjct: 7225 YRSLNQQANRLAHRLLAEGAGPERIVGVAARRAPEMVVALLAVLKAGAAYLPLDPDLPPA 7284 Query: 2714 RLHSILAGSTIRVVLSRSAERAHVQSLLDGQETILLEADEDQLASYPAHTPEAPRNLHDA 2773 RL ++A S + ++L+++A RA + + + L + P H P Sbjct: 7285 RLADMMADSGLSLLLTQTALRAELTAPAAVRVLELDAPGQPWAEGMPDHDPGIEVAPDGL 7344 Query: 2774 AYVIYTSGSTGTPKGVLIDHMGAANTVLDINRRFGITAGDKVLGLSSLYFDLSVYDIFGT 2833 AYVIYTSGSTG PKG H+ N + + + I G+ VL + FD+SV++ F Sbjct: 7345 AYVIYTSGSTGKPKGAGNRHVSLHNRLAWMQEAYPIGPGNTVLQKTPFGFDVSVWEFFWP 7404 Query: 2834 LAAGGTLVLPDHDKVRDPGHWLRLVQEHGVTVWNSVPALLELLLDSAEQSGQSLPGLRHV 2893 L G L L D+ RDP ++ H V + VP++L+ + A LR V Sbjct: 7405 LMTGARLALAAPDEHRDPALLAARIRRHAVDTLHFVPSMLQGFV--AHPDSAQCHSLRQV 7462 Query: 2894 LLSGDWISLGLPPRLRQAA----PASQLIAMGGATEASIWSNWFAVQEVAAHW------R 2943 + SG+ LP L++ A P L + G TEA+I HW R Sbjct: 7463 ICSGE----ALPAELQEQAFARLPQIALHNLYGPTEAAI---------DVTHWTCRPGER 7509 Query: 2944 SIPYGKPLSNQAYHVLDAHGQPCPDYVTGDLYIAGIGLAVGYENDAQKTADSFIHMP--- 3000 S+P G+P+S+ A +VLD P P + G+LY+ GIGLA GY +A+ F+ P Sbjct: 7510 SVPIGRPISHTAAYVLDGGLNPLPHGIAGELYLGGIGLARGYLGRPGLSAERFVADPFAA 7569 Query: 3001 DGQRLYRTGDLARYWTDGNLEFLGRRDFQVKIAGNRIELGDIEAALLRCPGVREAVVDTI 3060 DG R+YRTGDL R DG +E+LGR D QVKI G RIELG+IEA LL PGV AVV + Sbjct: 7570 DGSRMYRTGDLVRRRADGEIEYLGRTDHQVKIRGLRIELGEIEAQLLAQPGVAAAVVVAL 7629 Query: 3061 GTPPQ-LRLAAWVVPQGG-------PSPILQALESPFIEPERL 3095 P + RL + GG + +LQ+L ++ P+RL Sbjct: 7630 VEPGRPARLVGYAADPGGMLEAEALRAALLQSLPD-YMVPQRL 7671 Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 291/1042 (27%), Positives = 426/1042 (40%), Gaps = 89/1042 (8%) Query: 2085 SLLRLGMDSILIMELARQCELTLGIRCELKALFEHTTAASLTDYLLQQAQQQVQASASAS 2144 + LG DSIL +++ + G + LF+ T A L QQ Q + + + Sbjct: 7730 NFFELGGDSILSLQIVARAH-EQGWPLTPRQLFQSQTVAELA----QQCDQLQPPAPTQA 7784 Query: 2145 MAAAEPIHAD---PAQADQPFVLTELQHAYWVGRQSHYAL------GGVACHAYLEADAV 2195 + AA D AQ Q + EL+ Y + L G + + V Sbjct: 7785 VTAARGRLEDYLSAAQTAQLALQGELEDVYPLSPMQQGMLFHTMESPGSGLYVNQLSVRV 7844 Query: 2196 HGLDSAQLERCWNVLIARHGALR--IVIGSDGLQRI--LPQTPHYAIQVADCRQHSQAQT 2251 GLD A+ + W ++ARH +R + +D Q + + +T + I+V D + + Sbjct: 7845 EGLDEARFAQAWQSVLARHPVMRTGFLWQADYAQPLQAVWRTLAFGIEVQDWSARATMPS 7904 Query: 2252 DALQTQWRQAMSHQVMDSQ-QWPLFDVRVMHCPEGRSRLFIGIDMLINDATSGQILWEEL 2310 + + + + PL ++ G+ +L + ++ D S L +EL Sbjct: 7905 CRRRLPPLRRPILRAASTCCNRPLVRATLLRLGPGQHQLVWTMHHILLDGWSTSALMQEL 7964 Query: 2311 AALYQADGDAQAAGLRPFSISFRDYIQAKYQHSTARQAAREQARQFWLEQLPSLPAAPQL 2370 Y G +P DY Q +T A A+++W+ L +L L Sbjct: 7965 MLAY---------GGQPLPAPGPDYAQYIGWLATLDPQA---AQRYWMGALQALDGPSLL 8012 Query: 2371 PLRHEALQQHQPR--FSRRQHRLDAHQWSRLREQAASVNCTPAALLITAFAEVLAAWSSE 2428 E ++ R F + DA RL + A S T L+ A++ LA Sbjct: 8013 A---EGVRPDPARRGFGKLYGHCDAAATRRLEQFARSQRVTLNTLVQGAWSLALARHKRS 8069 Query: 2429 KRFTLNLTTFDRLPWHEDVPHLLGDFTAVTLLPLDLSSRSGFAQRAAAVNGSILGYLQHR 2488 T R V LG F + +++ + + + + +H Sbjct: 8070 TAVAFGATVSGRPAALPGVEKSLGLFINTIPIVVEVDGQRRVGDWLRTLQQTNIDSREHE 8129 Query: 2489 AFSAVDVLREWNRGRERAEALSMPVVFTSQLGMSDPTK---GAARQSPLGEVVYGISQTP 2545 D+ R W+ RA S+ V + S + G GE + G + Sbjct: 8130 HTPLYDIQR-WSGMAGRALFDSIIVFENFPISRSLEARAQAGLRFGQAEGEGLTGFAMDL 8188 Query: 2546 QVWLDHQACEQEGALVFNWDVIDDLFLPGVVDAMFDAYCTLLHYLAADPAHWETALPAML 2605 QV + + F +D LF V+A+ + L L+A E AL + Sbjct: 8189 QV-----VARETLDIEFCYD--RSLFGDAEVEALREQVMLNLDALSASG---ERALGELA 8238 Query: 2606 PLRQQ------QVRQAVNDTPAPLPQACLDQLFFSRAQQQPEQLALVSREGQWRYGQLAQ 2659 L Q ++ + +D PA LP L RA Q P+ +ALV E YG+L Sbjct: 8239 RLSPQALAAVLELGRGAHDYPADLPAHLL---IAQRAAQTPDAIALVLEEQSLSYGELNV 8295 Query: 2660 WAQRLSQALLAAGVRPGDRVAVLMQKCSQQVAACLAIQQCGAAYVPVDSSTPASRLHSIL 2719 A RL+ L++ GV RV V +++ V LA+ + GAAYVP+D P RL ++ Sbjct: 8296 RANRLAHHLMSLGVGAEQRVGVAVERSFDMVVGLLAVMKAGAAYVPLDLDYPPERLAYMV 8355 Query: 2720 AGSTIRVVLSRSAERAHVQSLLDGQETILLEADEDQLA-------SYPAHTPEAPRNLHD 2772 A S IRV+L+ A + LL Q L A PAH P Sbjct: 8356 ADSRIRVLLTH----ARARRLLAAQAQPGLRCLALDDADLAAQLAGLPAHDPVVAVAPQQ 8411 Query: 2773 AAYVIYTSGSTGTPKGVLIDHMGAANTVLDINRRFGITAGDKVLGLSSLYFDLSVYDIFG 2832 AYVIYTSGSTG PKGV + H + +T + L S FD + Sbjct: 8412 MAYVIYTSGSTGQPKGVAVSHGPLVMHCQATAALYEMTPQWRELQFMSFSFDGAHERWIT 8471 Query: 2833 TLAAGGTLVLPDHDKVRDPGHWLRLVQEHGVTVWNSV--PALLELLLDSAEQSGQSLPGL 2890 TL +G LVL + W L Q+ V N+V PA L L EQ G + P L Sbjct: 8472 TLISGAALVLRGPEMWSIEQSWQALHQQR---VSNAVFPPAYLGQLAQWGEQHGDA-PPL 8527 Query: 2891 RHVLLSGDWISLGLPPRLRQAAPASQLIAMGGATEAS----IWSNWFAVQEVAAHWRSIP 2946 + G+ + R+R+ LI G TE IW A V +P Sbjct: 8528 ELYVFGGEAMPRASFERVRRHLAPRLLINGYGPTETVVTPLIWKGTSAAG-VDFDGPFVP 8586 Query: 2947 YGKPLSNQAYHVLDAHGQPCPDYVTGDLYIAGIGLAVGYENDAQKTADSFIHMPDGQ--- 3003 GKP+ + ++LDA QP G+LYI G GLA GY ++A+ F+ P G+ Sbjct: 8587 IGKPVGRRNAYILDACLQPVAPGEAGELYIGGDGLARGYLERPAQSAERFVADPFGEPGA 8646 Query: 3004 RLYRTGDLARYWTDGNLEFLGRRDFQVKIAGNRIELGDIEAALLRCPGVREAVV----DT 3059 R+YRTGDLAR+ DGN+E+LGR D QVKI G RIELG+IEA L R PGV EA V D Sbjct: 8647 RMYRTGDLARWLPDGNVEYLGRLDHQVKIRGFRIELGEIEALLRRQPGVAEAAVVVRSDG 8706 Query: 3060 IGTPPQLRLAAWV-VPQGGPSP 3080 G +L A+V PQ +P Sbjct: 8707 QGEETVRQLVAYVGAPQAVAAP 8728 Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 153/464 (32%), Positives = 233/464 (50%), Gaps = 23/464 (4%) Query: 2605 LPLRQQQVRQA-VNDTPAPLPQACLDQLFFSRAQQQPEQLALVSREGQWRYGQLAQWAQR 2663 LPL + + A + T + LP + Q+ RA QP+ AL + Y L + + Sbjct: 4541 LPLHGEALAAATLGQTESCLPTLTVAQMIAHRAAAQPQSPALAAGGAVLDYAGLERRVEH 4600 Query: 2664 LSQALLAAGVRPGDRVAVLMQKCSQQVAACLAIQQCGAAYVPVDSSTPASRLHSILAGST 2723 L+ AL + GV PGD VA+ + +C++ V A LA +CGAAY+P+D+ +P +R IL + Sbjct: 4601 LAHALRSLGVAPGDIVALQLPRCAELVLALLATWRCGAAYLPLDTDSPVARRQQILQAAK 4660 Query: 2724 IRVVLSRSAERAHVQSLLDGQETILLEADEDQLASYP--AHTPEAPRNLHDAAYVIYTSG 2781 + +++ + + A +G D+LA+ P A P + AYV++TSG Sbjct: 4661 VHLLVMEAGQSA------EGLPADCTAVAWDELANSPVQASAPLPGSRMDATAYVLFTSG 4714 Query: 2782 STGTPKGVLIDHMGAANTVLDINRRFGITAGDKVLGLSSLYFDLSVYDIFGTLAAGGTLV 2841 STG PKGVLI H A V + + + A ++ DL +FG LA G L Sbjct: 4715 STGAPKGVLIGHAQLAAYVQGVTQALRLDACRHWALTGTVAADLGNTALFGALANGACLH 4774 Query: 2842 LPDHDKVRDPGHWLRLVQEHGVTVWNSVPALLELLLDSAEQSGQSLPGLRHVLLSGDWIS 2901 + + +RD + + +++HG+ VP+ L+ LL E LP ++L G+ + Sbjct: 4775 VASAEDMRDGERFAKFLRQHGIDALKIVPSHLDALL---ETPAPYLPAT--LVLGGEATA 4829 Query: 2902 LGLPPRLRQAAPASQLIAMGGATEASI------WSNWFAVQEVAAHWRSIPYGKPLSNQA 2955 R+R AP ++ G TE ++ + + A S+P + L + Sbjct: 4830 PAQLARIRALAPQCRVFNHYGPTECTVGVLVHRAATEAEAEAEADPGASLPLTEALPHAY 4889 Query: 2956 YHVLDAHGQPCPDYVTGDLYIAGIGLAVGYENDAQKTADSFIHMP--DGQRLYRTGDLAR 3013 VLDA +P P G L++ G LA GY DAQ+ ++FI P G+RLYR+GDLA Sbjct: 4890 VRVLDAQLRPTPAGAIGQLWLGGAQLARGY-LDAQQDREAFIDDPWLPGRRLYRSGDLAV 4948 Query: 3014 YWTDGNLEFLGRRDFQVKIAGNRIELGDIEAALLRCPGVREAVV 3057 G + GR D QVK+ G RIE G+IEAAL PGVR+A+V Sbjct: 4949 LLPQGGVRLAGRADHQVKVRGFRIEPGEIEAALRTQPGVRQALV 4992 Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 149/403 (36%), Positives = 199/403 (49%), Gaps = 15/403 (3%) Query: 2661 AQRLSQALLAAGVRPGDRVAVLMQKCSQQVAACLAIQQCGAAYVPVDSSTPASRLHSILA 2720 + R A AAG P RVA+ + V LA+ GAAYVP+D PA RL L Sbjct: 1179 SMRWRSAWHAAGAGPESRVALYAGRDIDFVCGMLAVLDTGAAYVPLDPQLPAERLAWQLQ 1238 Query: 2721 GSTIRVVLSRSAERAHVQSLLDGQETILLEADEDQLASYPAHTPEAPRNLH--DAAYVIY 2778 S R VL + A G + LEA A +P P +H AAY+IY Sbjct: 1239 DSGARWVL-HEGQSAPAWLAQAGVPLLSLEA-----AGTAPASPWTPFPVHPAQAAYLIY 1292 Query: 2779 TSGSTGTPKGVLIDHMGAANTVLDINRRFGITAGDKVLGL-SSLYFDLSVYDIFGTLAAG 2837 TSGSTG PKGVL+ G AN V + + + A + + + S++ DL ++G L +G Sbjct: 1293 TSGSTGRPKGVLVTRGGLANYVAAVLEKLALPAAARSMAMISTVAADLGHTTLYGALCSG 1352 Query: 2838 GTLVLPDHDKVRDPGHWLRLVQEHGVTVWNSVPALLELLLDSAEQSGQSLPGLRHVL-LS 2896 L L HD DP + + EH V V VP+ L+ LL +A Q LP RH L L Sbjct: 1353 RQLHLITHDLAFDPDGFAAYLHEHAVDVLKIVPSHLQALLHAARPE-QVLP--RHTLVLG 1409 Query: 2897 GDWISLGLPPRLRQAAPASQLIAMGGATEASIWSNWFAVQEVAAHWRSIPYGKPLSNQAY 2956 G+ L R+ PA +++ G +E ++ + +P G L Sbjct: 1410 GEATGWPLLERIAALQPACRVLNHYGPSETTVGVLVQEAASASRRAAVLPVGSALVGVQA 1469 Query: 2957 HVLDAHGQPCPDYVTGDLYIAGIGLAVGYENDAQKTADSFIHMP--DGQRLYRTGDLARY 3014 VLD + P G+LY+ G GLA GY A TA+ F+ P GQRLYR+GD ARY Sbjct: 1470 WVLDRQLRRAPVGAVGELYLGGAGLARGYHGRAALTAERFVAHPFASGQRLYRSGDRARY 1529 Query: 3015 WTDGNLEFLGRRDFQVKIAGNRIELGDIEAALLRCPGVREAVV 3057 DG++EFLGR D QVKI G+R+E G++ LLR GV +A V Sbjct: 1530 LGDGSIEFLGRIDDQVKIRGHRVEPGEVRQQLLRLAGVVDAAV 1572 Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 126/467 (26%), Positives = 204/467 (43%), Gaps = 44/467 (9%) Query: 3450 RFQSAPLQQALQQLLPAYMVPGALMALDELPLSATGKVDRKRLPRPAMRAA--LASATSA 3507 R +A L+QAL LP YMVP L L LPL+A GK+DRK LP P + + +A Sbjct: 3099 RQDAATLKQALAARLPDYMVPAVLTLLPTLPLNANGKIDRKALPAPRLHSEDFAYAAPQG 3158 Query: 3508 VADSPLAQLWQQALGVSTLTPDSDFFALGGDSLIAVRLIERIRHTLHANVALTDLFEASG 3567 + LAQ+WQ LG+ + FF LGG SL+A L+ R+R+ A V G Sbjct: 3159 QVEQRLAQIWQALLGLERVGRFDHFFELGGHSLLAASLVARLRYQGEAGV---------G 3209 Query: 3568 FGAFERRVLAAP---AMAETHSAGLQPDPAHW----------AEPFPLTDVQQ-----AY 3609 R V A P MA A P+ W A P ++ + Sbjct: 3210 VALPLRLVFAYPRLHEMAACIEARPPLPPSSWRLHLRRCCNLASGAPRRCCRRPSIGCGW 3269 Query: 3610 WIGRKAGFELGGISTHIYAEIEVEG-FSIEQLQSSWQAVVRRHGMLRAVISDDGLQQCLP 3668 W +A T + A + +EG L+ + + +V RH +LR +D + Sbjct: 3270 WTACQA--RPMRPPTTMSAALMLEGVVDAVLLEQALRLLVARHDILRTGFGEDADGNPVA 3327 Query: 3669 EVPPYVITY--HDLRQADDATRLHWQEQTRQQLSHAVHDTTRWPLFAIHAASLDAQRIRI 3726 + P+ + HDL R ++ R+ + A + PL L +Q+ + Sbjct: 3328 TLHPFDFSLEQHDLAALPPPQRDLQLDRLRRSHAAARFALRQPPLLRAALVRLASQQQVL 3387 Query: 3727 CISLDNLICDGRSMRLILAE----WSARLRHPEQSWPLLSASFRDYVLFREA---QPVNQ 3779 +++ +++ DG S+ L++ E +SA + P L + DY ++ A + + Sbjct: 3388 LLAIHHIVADGWSVALMMEEIAAAYSALQEGRSYAPPPLPLQYADYAAWQVAGAGSRMLE 3447 Query: 3780 QSLHYWLTRLQQLPPPPVLP-MQARASDALPHFTRRQMRLSADRWQRLQGFATQRGLTIN 3838 S+ +W L +P P LP + R + A R +M L A +Q A + G+T Sbjct: 3448 DSIAWWRDALAGVPATPYLPSTRPRPARATYAGQRLRMHLPAHLRSGVQALARREGVTAY 3507 Query: 3839 ALLLTAYAELIAHWSARADFTLSLTLFNRPAVHADIDGMVGDFTSLV 3885 A+LL ++A L+ S DF + + R H D++ +VG F +++ Sbjct: 3508 AVLLASFAWLLHQRSGAGDFVVGTDVAGRS--HPDLERLVGFFVNVL 3552 Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 111/458 (24%), Positives = 188/458 (41%), Gaps = 30/458 (6%) Query: 3451 FQSAPLQQALQQLLPAYMVPGALMALDELPLSATGKVDRKRLPRPAMRAALA-SATSAVA 3509 ++ L+ AL Q LP YMVP L+ L LPL+A GKVDRK LPRP A Sbjct: 7649 LEAEALRAALLQSLPDYMVPQRLILLPALPLNANGKVDRKALPRPDFNEQGGYEAPQGQT 7708 Query: 3510 DSPLAQLWQQALGVSTLTPDSDFFALGGDSLIAVRLIERIRHTLHANVALTDLFEASGFG 3569 + LA +W + L + + +FF LGGDS+++++++ R H + LF++ Sbjct: 7709 EIGLAAIWAEVLRLQRVGRHDNFFELGGDSILSLQIVARA-HEQGWPLTPRQLFQSQTVA 7767 Query: 3570 AFERRV----LAAPAMAETHSAGLQPDPAHWAEP------------FPLTDVQQAYWIGR 3613 ++ AP A T + G D A+ +PL+ +QQ Sbjct: 7768 ELAQQCDQLQPPAPTQAVTAARGRLEDYLSAAQTAQLALQGELEDVYPLSPMQQGMLFHT 7827 Query: 3614 KAGFELGGISTHIYA-EIEVEGFSIEQLQSSWQAVVRRHGMLRA--VISDDGLQ--QCLP 3668 E G ++ + VEG + +WQ+V+ RH ++R + D Q Q + Sbjct: 7828 ---MESPGSGLYVNQLSVRVEGLDEARFAQAWQSVLARHPVMRTGFLWQADYAQPLQAVW 7884 Query: 3669 EVPPYVITYHDLR-QADDATRLHWQEQTRQQLSHAVHDTTRWPLFAIHAASLDAQRIRIC 3727 + I D +A + R+ + A PL L + ++ Sbjct: 7885 RTLAFGIEVQDWSARATMPSCRRRLPPLRRPILRAASTCCNRPLVRATLLRLGPGQHQLV 7944 Query: 3728 ISLDNLICDGRSMRLILAEWSARLRHPEQSWPLLSASFRDYVLFREAQPVNQQSLHYWLT 3787 ++ +++ DG S ++ E L + Q P + Y+ + A Q + YW+ Sbjct: 7945 WTMHHILLDGWSTSALMQELM--LAYGGQPLPAPGPDYAQYIGWL-ATLDPQAAQRYWMG 8001 Query: 3788 RLQQLPPPPVLPMQARASDALPHFTRRQMRLSADRWQRLQGFATQRGLTINALLLTAYAE 3847 LQ L P +L R A F + A +RL+ FA + +T+N L+ A++ Sbjct: 8002 ALQALDGPSLLAEGVRPDPARRGFGKLYGHCDAAATRRLEQFARSQRVTLNTLVQGAWSL 8061 Query: 3848 LIAHWSARADFTLSLTLFNRPAVHADIDGMVGDFTSLV 3885 +A T+ RPA ++ +G F + + Sbjct: 8062 ALARHKRSTAVAFGATVSGRPAALPGVEKSLGLFINTI 8099 Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 8/118 (6%) Query: 3451 FQSAPLQQALQQLLPAYMVPGALMALDELPLSATGKVDRKRLPRP--AMRAALASATSAV 3508 + L+ AL +LP YMVP AL+ L LPL+ GKVDRK LP P A R A A+ A+ Sbjct: 6126 LDTGALRTALGAVLPDYMVPAALVMLPALPLNINGKVDRKALPAPELAARTAYAAPQGAL 6185 Query: 3509 ADSPLAQLWQQALGVSTLTPDSDFFALGGDSLIAVRLIERIRHTLHANVALT--DLFE 3564 + LA +W++ L + D +FF LGGDS+++++++ R R A +A+T +FE Sbjct: 6186 EEQ-LAAIWREVLKGGAVGRDDNFFELGGDSILSLQIVSRAR---RAGIAITARQMFE 6239 Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 157/651 (24%), Positives = 252/651 (38%), Gaps = 97/651 (14%) Query: 3459 ALQQLLPAYMVPGALMALDELPLSATGKVDRKRLPRPAMRAALASATSAVADSPLAQLWQ 3518 AL ++LPA M P + L ELP GKVDRK A+ L S D Sbjct: 5018 ALAEVLPAQMQPSRWLVLPELPRLGNGKVDRK-----ALLEQLGRQDSGTPDVVAQAQGA 5072 Query: 3519 QALGVS----------TLTPDSDFFALGGDSLIAVRLIERIRHTLHANVALTDLFEASGF 3568 A ++ + + DFF LG SL+ ++LI RIR +L A +F+ Sbjct: 5073 LAALLAQQMAQLLERPAIAANEDFFELGAHSLLVIKLIARIRQSLALEAAPALVFDHPNA 5132 Query: 3569 --------------GAFERRV-----LAAPAMAETHSAGLQPDPA-HWAEPF-------- 3600 A ER AAPA A++ +A PA H P+ Sbjct: 5133 IALAAALQAAAPDPDALERLAQSRLESAAPAQADSMNALTAGFPARHTRIPYRSMNDMSR 5192 Query: 3601 ------PLTDVQQAYWIGRKAGFELGGISTHIYAEIEVEG-FSIEQLQSSWQAVVRRHGM 3653 PL+ QQ W ++ +E G + ++ + G L ++ A+ RH + Sbjct: 5193 PPHEHAPLSYSQQQLWFLQQ--YEPGLTAYNLTRAFRLTGALDRAALSAALDALQARHAI 5250 Query: 3654 LRAVISD-DGL--QQCLPEVPPYVITYHDLRQADDATRLHWQEQTRQQLSHAVHDTTRWP 3710 LR ++ DGL QQ +P P + + DLRQ R ++ Q + V D + Sbjct: 5251 LRTRFAETDGLPYQQAVPPF-PVQLAWLDLRQLPPQQREQRLQEELQAAAAHVFDLGQAG 5309 Query: 3711 LFAIHAASLDAQRIRICISLDNLICDGRSMRLILAEWSARLRHPEQS----WPLLSASFR 3766 + +L Q + I + +++ D S L++ + + R + P L + Sbjct: 5310 QLDVRLIALGPQEHVLVIGMHHIVSDAWSNPLVIRDLAEAYRQARRDGQAQLPALPMQYA 5369 Query: 3767 DYVLFREAQPVN---QQSLHYWLTRL----QQLPPPPVLPMQARAS--DALPHFTRRQMR 3817 DY ++ + L YW L L P P AR S A+ FT Sbjct: 5370 DYAHWQRQRVQGAWLADELRYWDDYLGPVNSSLDLPTDRPRPARQSFRGAVHAFT----- 5424 Query: 3818 LSADRWQRLQGFATQRGLTINALLLTAYAELIAHWSARADFTLSLTLFNRPAVHADIDGM 3877 L + Q++Q F + T L+ A+ L++ +S ++DF + R HA++ + Sbjct: 5425 LDSALAQQMQAFCRAQHCTPFVALMAAWQVLLSRYSGQSDFLVGAPNAGRN--HAELQDL 5482 Query: 3878 VGDFTSLVLFAFDARTPASFQQRATAVQGQMWQDLEHQDVSAVRVL--REAARQRGQLNM 3935 VG F + L+ + ++ V+G M LEH D+ +L R+ R G+ + Sbjct: 5483 VGFFVTTQLYRARLTPELTVRELVRQVRGDMLAALEHGDLPFEALLEHRKVERDPGRNPL 5542 Query: 3936 VAAPVVFTSGLGVAQGGDDHDSWLGDFVYSV-------SQTPQVWLDQQLV--ERHGRLE 3986 F G+ G+ + D + + S + LD +++ E H RLE Sbjct: 5543 ------FQVMFGLQMVGEGASALAFDDIVTAPLPLAQDSAKFDLSLDVKVIKGEVHCRLE 5596 Query: 3987 LSWDSVDGLFPEGLLDEMFHAYELLLHTLADHDSAWATPATLLLPERHARL 4037 + D LF + M Y LL A+ LL + ARL Sbjct: 5597 YASD----LFDAATIAAMAGHYRNLLRGFAEAPERPVAQLALLDQDEQARL 5643 Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 89/355 (25%), Positives = 150/355 (42%), Gaps = 29/355 (8%) Query: 2198 LDSAQLERCWNVLIARHGALRIVIG--SDGLQRILPQTPHYAIQVADCRQHSQAQTDALQ 2255 +D+ LE+ +L+ARH LR G +DG ++++ D Q D Sbjct: 3294 VDAVLLEQALRLLVARHDILRTGFGEDADGNPVATLHPFDFSLEQHDLAALPPPQRDLQL 3353 Query: 2256 TQWRQAMSHQVMDSQQWPLFDVRVMHCPEGRSRLFIGIDMLINDATSGQILWEELAALYQ 2315 + R++ + +Q PL ++ + L + I ++ D S ++ EE+AA Y Sbjct: 3354 DRLRRSHAAARFALRQPPLLRAALVRLASQQQVLLLAIHHIVADGWSVALMMEEIAAAYS 3413 Query: 2316 ADGDAQAAGLRPFSISFRDYIQAKYQHSTARQAAREQARQFWLEQLPSLPAAPQLPLRHE 2375 A + ++ P + + DY A +Q + A E + +W + L +PA P LP Sbjct: 3414 ALQEGRSYAPPPLPLQYADY--AAWQVAGAGSRMLEDSIAWWRDALAGVPATPYLPSTRP 3471 Query: 2376 ALQQHQPRFSRRQHRLDAHQWSRLREQAASVNCTPAALLITAFAEVLAAWSSEKRFTLNL 2435 + R + L AH S ++ A T A+L+ +FA +L S F + Sbjct: 3472 RPARATYAGQRLRMHLPAHLRSGVQALARREGVTAYAVLLASFAWLLHQRSGAGDFVVGT 3531 Query: 2436 TTFDRLPWHEDVPHLLGDFTAVTLLPLDLSSRSGFAQRAAAVNGSILGYLQHRAFSAVDV 2495 R H D+ L+G F V +LPL L ++ A RA S + +L+H A AV+ Sbjct: 3532 DVAGRS--HPDLERLVGFF--VNVLPLRLRPQT-LAPRA-----SFVAWLRHCADVAVNA 3581 Query: 2496 LREWNRGRER-AEALSMPVVFTSQLGMSDPTKGAARQSPLGEVVYGISQTPQVWL 2549 G +R EA +P R +PL +V++ + TP+ L Sbjct: 3582 FDHQEPGFDRIVEAAGVPR--------------ERRWNPLVQVLFVLQNTPRAAL 3622 Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 10/150 (6%) Query: 3446 EHVYRFQSAPLQQALQQLLPAYMVPGALMALDELPLSATGKVDRK---RLPRPAMRAALA 3502 E R S L+ AL+ LP YM+P + L LP++ GK+DRK R+ +A Sbjct: 8729 ETAQRDFSDSLRAALRAGLPEYMLPAHFVLLAALPVTHNGKLDRKALPAPQAAPARSYVA 8788 Query: 3503 SATSAVADSPLAQLWQQALGVSTLTPDSDFFALGGDSLIAVRLIERIR--HTLHANVALT 3560 AT A LA++WQ L + + +FF LGGDSL+ +++I R R + N L Sbjct: 8789 PATPAA--QALAEIWQTVLKRERVGQEDNFFELGGDSLLCLQVIARARGQRQWNFNFKLA 8846 Query: 3561 DLFEASGFGA---FERRVLAAPAMAETHSA 3587 DL + A E R PA+ ++ Sbjct: 8847 DLMQRPTIAALLGLESRPADGPALVAMNAG 8876 Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 100/386 (25%), Positives = 157/386 (40%), Gaps = 45/386 (11%) Query: 3510 DSPLAQLWQQALGVSTLTPDSDFFALGGDSLIAVRLIERIRHTLHANVALTDLFEASGFG 3569 ++ LA +WQ AL + +DFF GG SL A++++ + LF A Sbjct: 603 ETALAAIWQSALKRAIAGRQADFFRSGGSSLAAMQVVAAVVDRWQVEFTPAMLFAAP--- 659 Query: 3570 AFERRVLAAPAMAETHSAGLQPDP----AHWAEPFPLTDVQQAYWIG-----RKAGFELG 3620 +A +A AG Q P FPLT QQ W+ A + L Sbjct: 660 ---TLAASAAQIAALLEAGAQAAPLPACVDGQSEFPLTQAQQGLWLTWQLQPDSAAYNLA 716 Query: 3621 GISTHIYAEIEVEGFSIEQLQSSWQAVVRRHGMLRAVIS-DDG--LQQCL--PEVPPYVI 3675 G+ + E++VE L+ + + RH LR + DG +QQ L E P ++ Sbjct: 717 GV-LDLRGELQVEA-----LEDALCDLAARHAALRTLFPLRDGTPVQQVLDIDEARPMLL 770 Query: 3676 TYHDLRQADDATRLHWQEQTRQQL-SHAVHDTTRWPLFAIHAASLDAQRIRICISLDNLI 3734 DLR+ R Q+ + A + PL A+ L+ R+ + + ++ Sbjct: 771 R-SDLRRQPADKRAQAAASALQRFHAQAFRLDSETPLRAM-LVQLEPHHFRLGLCIHHIA 828 Query: 3735 CDGRSMRLILAE----WSARLRHPEQSWPLLSASFRDYVLFRE-----AQPVNQQSLHYW 3785 DG S+ +IL E + AR SWP L DY +++ P Q+ L YW Sbjct: 829 ADGWSLGIILDELTAAYEARCAGAAPSWPALELQPGDYAVWQRQRSQPGSPEFQRQLDYW 888 Query: 3786 LTRLQQ----LPPPPVLPMQARASDALPHFTRRQMRLSADRWQRLQGFATQRGLTINALL 3841 RL+ LP P P QA A + + RLSA L+ A +G+T+ + Sbjct: 889 RARLEGAPALLPLPTDRPRQAGAHGG---EGQHRWRLSAALSTALRKLAASQGVTLYGAV 945 Query: 3842 LTAYAELIAHWSARADFTLSLTLFNR 3867 L + + S ++D + L +R Sbjct: 946 LALFTLALQRLSGQSDLCVGAPLADR 971 >gi|300311697|ref|YP_003775789.1| acyltransferase family protein [Herbaspirillum seropedicae SmR1] Length = 932 Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 178/594 (29%), Positives = 266/594 (44%), Gaps = 66/594 (11%) Query: 3 DHAHDLSSKPALPDWLEHWARQNGEREALHFSDS-RQQRLSYGELSERVRAHAAAL-QQR 60 DHA L + +W H Q G+ L + R+Q + Y +L + + A AL Q Sbjct: 110 DHAQTLLE---MLEW--HADHQAGKVHILLIDEQHREQEIRYCDLLDDAKMVATALLQGG 164 Query: 61 WTPGTVALILFPSGLDYVVSLLACFYAGIIAVPVNLPGAARVKRV---LAKIDAISDDCK 117 P ++ P+ DY+ +AG I VP+ P AR+ R+ L + I + + Sbjct: 165 LLPKQTVALMLPTSRDYLACFFGILFAGGIPVPIYPP--ARLSRIDDQLRRHHHILSNSE 222 Query: 118 PAFVLTGETIEQASGDELKQFAARQAMDIVHLESLVADAAAWQRPDALNAQA----IAFL 173 F++T E K FA + L S++ A L + IAF+ Sbjct: 223 AVFIVTLA--------EAKPFARMLQAKLPGLMSILTPAELKSSAGFLRYRPSRDDIAFI 274 Query: 174 QYTSGSTGLPKGVVNRHGQLLHNIQFQRRLLAPQGQSCTVASWLPLFHDLGLIMGILAPL 233 QYTSGSTG PKGV H LL N++ ++ + S SWLPL+HD+GLI L Sbjct: 275 QYTSGSTGDPKGVTLTHANLLSNVRALGKV-SRVSPSDIFVSWLPLYHDMGLIGAWFGSL 333 Query: 234 ALGGRALYMPPMSFVAAPLDWLLLASRERATVLPCPSFALRSCVSALATATPQQRRELDL 293 G + M PM+F+A P WL SR R T+ P+FA C+ + A LDL Sbjct: 334 YHGIPLVLMSPMTFLAQPSIWLDQLSRHRGTISAAPNFAYELCLRHVNDALLSS---LDL 390 Query: 294 SSVHCLMPAAEPVLPVHVQGFIDAFAPYGLTATAMRPAYGLAEATLVVSANTHDRGPCLL 353 S + +EPV + F F GL AM P YGLAE ++ +S D P + Sbjct: 391 SCWRLALNGSEPVSATTLASFAKRFEGCGLRYRAMTPVYGLAECSVGLSFPVLDADPRID 450 Query: 354 AVDRQAIERDIVLPHPPQERARWYV---GNGDDFGAQEVLIVDPEH----KRCLGQDKVG 406 ++ RQ + R+ HP A + G ++ +VD RC VG Sbjct: 451 SISRQLLAREGKALHPDSADAADTIKVPSCGPALPGHQIRVVDDAGFELPSRC-----VG 505 Query: 407 EIWVRGPSVAGGYWGKNQNDEAFAGTLVDAAPGEHPFLRTGDMGFLHEGQLFVTGRRKDM 466 + RGPS GY+ +N +A A D +L +GD +L EG++++ GR KD+ Sbjct: 506 RLEFRGPSATHGYY---RNPKATANLFHDG------WLDSGDYAYLAEGEVYIVGRIKDL 556 Query: 467 MIFRGQCHYPNDIEASASQCHALAVEDSAAAFSLSDDSGEDRLVIVQEVRKSAQAQSSDY 526 + G+ YP D+E + S + A S ++G +RLVIV E + Q + Sbjct: 557 IKRGGRNLYPYDLEQAVSHVRGIRRGGVAVFGSNDPENGAERLVIVAET----EIQDT-- 610 Query: 527 ADLAATIRQTVAQEHQLSAHAI-------ILIRKGTLPRTTSGKIRRRTVRQSY 573 L A++R+ V H+ S I + + + RT+SGKIRR + +Y Sbjct: 611 -KLQASMRRAV---HEASIDVIGEPPDDVVFVPPHWVLRTSSGKIRRLACKAAY 660 Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 117/460 (25%), Positives = 179/460 (38%), Gaps = 55/460 (11%) Query: 2648 REGQWRYGQLAQWAQRLSQALLAAGVRPGDRVAVLMQKCSQQVAACLAIQQCGAAYVPVD 2707 RE + RY L A+ ++ ALL G+ P VA+++ +A I G VP+ Sbjct: 140 REQEIRYCDLLDDAKMVATALLQGGLLPKQTVALMLPTSRDYLACFFGILFAGGIPVPIY 199 Query: 2708 SSTPASRL-------HSILAGSTIRVVLSRSAERAH---VQSLLDGQETILLEADEDQLA 2757 SR+ H IL+ S +++ + + +Q+ L G +IL A+ A Sbjct: 200 PPARLSRIDDQLRRHHHILSNSEAVFIVTLAEAKPFARMLQAKLPGLMSILTPAELKSSA 259 Query: 2758 SYPAHTPEAPRNLHDAAYVIYTSGSTGTPKGVLIDHMGAANTVLDINRRFGITAGDKVLG 2817 + + P + D A++ YTSGSTG PKGV + H + V + + ++ D + Sbjct: 260 GFLRYRP----SRDDIAFIQYTSGSTGDPKGVTLTHANLLSNVRALGKVSRVSPSDIFVS 315 Query: 2818 LSSLYFDLSVYDI-FGTLAAGGTLVLPD-HDKVRDPGHWLRLVQEHGVTVWNSVPALLEL 2875 LY D+ + FG+L G LVL + P WL + H T+ + EL Sbjct: 316 WLPLYHDMGLIGAWFGSLYHGIPLVLMSPMTFLAQPSIWLDQLSRHRGTISAAPNFAYEL 375 Query: 2876 LL---DSAEQSGQSLPGLRHVLLSGDWISL-----------GLPPRLRQAAPASQL--IA 2919 L + A S L R L + +S G R R P L + Sbjct: 376 CLRHVNDALLSSLDLSCWRLALNGSEPVSATTLASFAKRFEGCGLRYRAMTPVYGLAECS 435 Query: 2920 MGGATEA--------SIWSNWFAVQEVAAHWRS--------IPYGKP-LSNQAYHVLDAH 2962 +G + SI A + A H S +P P L V+D Sbjct: 436 VGLSFPVLDADPRIDSISRQLLAREGKALHPDSADAADTIKVPSCGPALPGHQIRVVDDA 495 Query: 2963 GQPCPDYVTGDLYIAGIGLAVGYENDAQKTADSFIHMPDGQRLYRTGDLARYWTDGNLEF 3022 G P G L G GY + + TA+ F DG +GD A Y +G + Sbjct: 496 GFELPSRCVGRLEFRGPSATHGYYRNPKATANLF---HDGW--LDSGDYA-YLAEGEVYI 549 Query: 3023 LGRRDFQVKIAGNRIELGDIEAALLRCPGVREAVVDTIGT 3062 +GR +K G + D+E A+ G+R V G+ Sbjct: 550 VGRIKDLIKRGGRNLYPYDLEQAVSHVRGIRRGGVAVFGS 589 >gi|300312041|ref|YP_003776133.1| acyl-CoA synthetase/AMP-acid ligase II protein [Herbaspirillum seropedicae SmR1] Length = 539 Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 133/477 (27%), Positives = 202/477 (42%), Gaps = 43/477 (9%) Query: 2632 FFSRAQQQPEQLALVSREGQWRYGQLAQWAQRLSQALLAAGVRPGDRVAVLMQKCSQQVA 2691 + AQ +P+ AL R Q Y LA ++++ ALLA G+ PG+RVAV ++K + V Sbjct: 10 LLASAQARPQATALRYRGQQLDYAGLAAGVEQVAAALLALGLGPGERVAVYLEKRMETVL 69 Query: 2692 ACLAIQQCGAAYVPVDSSTPASRLHSILAGSTIRVVLSRSAERAHVQSLLDG----QETI 2747 A G +VP++ +++ IL +RV++S + L Q + Sbjct: 70 ALFGAAAAGLVFVPINPLLKPAQVSHILQDCAVRVLVSSEPRHPALADRLSQCPALQTVV 129 Query: 2748 LLE------------------ADEDQLASYPAHTPEAPRNLH-----DAAYVIYTSGSTG 2784 L++ A D A A R H D A ++YTSGSTG Sbjct: 130 LVDAAAAAPATPAPPAPLGRLATLDWNAFLQAAPGPGSRRAHRRIDADIAAILYTSGSTG 189 Query: 2785 TPKGVLIDHMGAANTVLDINRRFGITAGDKVLGLSSLYFDLSVYDIFGTLAAGGTLVLPD 2844 PKGV++ H + G D++L + L FD + + +G ++ L + Sbjct: 190 QPKGVVLSHRNLVAGAQSVAGYLGNHPQDRLLAVLPLSFDYGLSQLSTAFLSGASVTLLN 249 Query: 2845 HDKVRDPGHWLRLVQEHGVTVWNSVPALLELLLDSAEQSGQSLPGLRHVLLSGDWISLGL 2904 + RD L V G+T VP L + L G S LR++ SG + + Sbjct: 250 YLAPRD---ILHAVASEGITGLAGVPPLWQQLAGLPWPQGCS---LRYLTNSGGALPRSV 303 Query: 2905 PPRLRQAAPASQLIAMGGATEASIWSNWFAVQEVAAHWRSIPYGKPLSNQAYHVLDAHGQ 2964 +LR+A P +Q+ M G TEA S + E+ SI G+ + N V+ G Sbjct: 304 LAQLRRALPQAQVFLMYGLTEA-FRSTYLPPAELDRRPDSI--GRAIPNAEIMVVRPDGS 360 Query: 2965 PCPDYVTGDLYIAGIGLAVGYENDAQKTADSFIHMPDGQRLYRT-------GDLARYWTD 3017 PC G+L G +A GY ND +TA+ F P + T GD R Sbjct: 361 PCAPGEVGELVHRGALVAQGYWNDPARTAERFRPAPGREAALGTPELAVWSGDSVRMDEQ 420 Query: 3018 GNLEFLGRRDFQVKIAGNRIELGDIEAALLRCPGVREAVVDTIGTPPQLRLAAWVVP 3074 G L F+GR D +K++G RI ++E L + V + P Q + VVP Sbjct: 421 GYLYFVGRADDMIKVSGYRISPHEVEEVLHATGLADQFAVVGVAHPQQGQAVVAVVP 477 >gi|300311251|ref|YP_003775343.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Herbaspirillum seropedicae SmR1] Length = 413 Score = 101 bits (251), Expect = 1e-21, Method: Composition-based stats. Identities = 106/435 (24%), Positives = 185/435 (42%), Gaps = 41/435 (9%) Query: 691 ARTSDIAIIGMGLRLPGPDGADIVTEDALWDMLVQGKDAIRSMPARRFRQRDDIPGLGSY 750 +RT + ++ GL P G ++ W + +GK I ++ + D P + Sbjct: 2 SRTRERRVVITGLGCISPVGNNVADT---WSAIKEGKSGIATVT-----KFDATPFTTHF 53 Query: 751 LEDIDRFDAPFFKMSPREAINTDPQQRLLLEECWHALENAGLTPSSLKDSDTGVFVGIGT 810 ++ F+ + + +EA + D + A++++GLT + GV +G G Sbjct: 54 AGEVKGFNIEDY-IPAKEARHMDTFIHFGMAAGIQAMQDSGLTVTDENAERIGVMIGSGI 112 Query: 811 A-----DYGHLPFASADPAHLDAYYGTGTVFAAAAGRLSFHFDWHGPAMSVDTACSSAHS 865 + H + P + ++ ++ +G LS F GP +++ TAC++ Sbjct: 113 GGLPLIEETHAELTNRGPRRISPFFIPASIINMISGNLSIKFGLKGPNLAIVTACTTGLH 172 Query: 866 ALHLAVQSLRAGECPLAVAAGVKLHLVPEIDVVLNKAGMLAADGRCKTMDAAA------- 918 + A + + G+ + VA G + + P L G +A D A Sbjct: 173 CIGSAARMIMYGDADVMVAGGAESSVSP-----LGIGGFASARALSTRNDDPATASRPWD 227 Query: 919 ---DGYVRGEGCLVLVLKPLQQALADGNTIRAVIRDTTVRQDGSGSSLSAPNGQAQFQLL 975 DG+V GEG V+VL+ + A A G I A + G ++APN + + Sbjct: 228 KDRDGFVLGEGAGVMVLEEYEHAKARGAKIYAEL--LGFGMSGDAYHMTAPNLDGPRRCV 285 Query: 976 RRSLQRAGLSPAQIDYVEMHGTGTRLGDPIEYDSLAQLFAGRADDDPLWLGSIKTNIGHL 1035 +L+ AG++P ++ Y+ HGT T LGD E D++ F A + + S K+ GHL Sbjct: 286 LNALRDAGVNPDEVQYLNAHGTSTPLGDKNESDAIKAAFGDHAYK--MVVNSTKSMTGHL 343 Query: 1036 EAAAGAAGIVKTILALEKGLIPPLVGLNEVNPLVDLQRIPARLPTAPQAWPQRAPVRRAG 1095 AG V T+LA+ + PP + + +P DL A QA + + A Sbjct: 344 LGGAGGLETVLTVLAVHNQVSPPTMNIFNQDPECDLDY------CANQARDMKIDI--AV 395 Query: 1096 VTSYGFTGTIAHVVL 1110 S+GF GT +V+ Sbjct: 396 KNSFGFGGTNGTLVI 410 >gi|300311248|ref|YP_003775340.1| malonyl CoA-[acyl-carrier-protein] transacylase [Herbaspirillum seropedicae SmR1] Length = 310 Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/289 (31%), Positives = 133/289 (46%), Gaps = 12/289 (4%) Query: 1210 IAMMFTGQGAQYIGMGRQLHEQQPVFRAALDEVDTLMLPYLGRSIIDLMHHGEEALLQQT 1269 A +F GQG+Q IGM + V + + D L LG+ L+ G + L T Sbjct: 4 FAFVFPGQGSQAIGMLNGFADNDVVRQTVAEASDALQFD-LGK----LIAEGPKEDLDLT 58 Query: 1270 CHAQPALFAIEYALARLWLHLG-VAPVAVMGHSIGEFAAMVIAGALPLEQACRLIVRRGQ 1328 + QP + A R WL G AP V GHS+GE++A+V AG + + A L+ R Q Sbjct: 59 TNTQPVMLTAAVAFYRAWLAAGGKAPALVAGHSLGEYSALVAAGVIAFKDAVPLVRFRAQ 118 Query: 1329 LMQ-ALPEGGKMLAARLTEAQASDHLRQLPPALQEELAIAAINGQQDVVFSGSGSAIAVL 1387 MQ A+P G +AA L + A + + N VV +G +A+ Sbjct: 119 AMQEAVPVGQGGMAAILGLSDEDVRAACAEAAQGDVVEAVNFNAPAQVVIAGHKAAVE-R 177 Query: 1388 AEQLAGAGCHCRA--LSVSHAFHSPLLDPMLQEWEQECQSVTSSAPATAMLSTLTGSWLQ 1445 A +A A RA L VS FHS LL P + +V SAP +++ + + + Sbjct: 178 ACDIAKAKGAKRALPLPVSAPFHSSLLKPASDRLQAYLANVAFSAPQIPLINNVDVAVVN 237 Query: 1446 E-APSAHYLRQHAREPVRFHQALQAL-AEVADVVLEVGPHAVLTALAQR 1492 + A L + A PVR+ + +Q + AE ++E GP VLT L +R Sbjct: 238 DPAAIKDALVRQAAAPVRWVETVQKMAAEGVTHLVECGPGKVLTGLTKR 286 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.321 0.133 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 13,337,191 Number of extensions: 586367 Number of successful extensions: 2234 Number of sequences better than 1.0e-08: 10 Number of HSP's gapped: 2156 Number of HSP's successfully gapped: 28 Length of query: 4172 Length of database: 1,619,870 Length adjustment: 105 Effective length of query: 4067 Effective length of database: 1,122,695 Effective search space: 4566000565 Effective search space used: 4566000565 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 141 (58.9 bits)