BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2118.p (1007 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311805|ref|YP_003775897.1| two component hybrid sensor his... 1425 0.0 gi|300311617|ref|YP_003775709.1| PAS/PAC sensor hybrid histidine... 374 e-104 gi|300309882|ref|YP_003773974.1| multi-sensor hybrid histidine k... 331 2e-91 gi|300311768|ref|YP_003775860.1| PAS/PAC sensor hybrid histidine... 327 3e-90 gi|300313027|ref|YP_003777119.1| two component transmembrane sen... 139 2e-33 >gi|300311805|ref|YP_003775897.1| two component hybrid sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1278 Score = 1425 bits (3690), Expect = 0.0, Method: Compositional matrix adjust. Identities = 716/865 (82%), Positives = 775/865 (89%), Gaps = 11/865 (1%) Query: 150 GVLCSFTRATGLDAALAASEASVRANNAFVRQLLDSTDQGFFSIDRDGLLTLCNAAFLQL 209 GV T ++ ALAASEASVRANNAFVRQLLDSTDQGFFSID G++TLCNAAFLQL Sbjct: 414 GVAFDVTARKLMEQALAASEASVRANNAFVRQLLDSTDQGFFSIDSAGIITLCNAAFLQL 473 Query: 210 LGYASEKDVLGRFIGEVV-QPV----VRNECAVLKAAREGISAQVDSEDFRRVDGSSFPV 264 LGYA+EKDVLGR I +V+ QP R CAVL+AAREG+SA VDSE+F RVDG+SFPV Sbjct: 474 LGYAAEKDVLGRPIHDVILQPSEETQSRTGCAVLRAAREGVSAHVDSENFLRVDGTSFPV 533 Query: 265 QYQAHPVWQDGQLQGALCTFIDLTERRRGMQALSWSENRLTAIFNQASVCFSELDLKGRY 324 QYQ HPVWQDGQLQGALCTF+DLTERRRG+QALSWSENRL AIFNQASVCFSELDL+GRY Sbjct: 534 QYQTHPVWQDGQLQGALCTFVDLTERRRGLQALSWSENRLRAIFNQASVCFSELDLQGRY 593 Query: 325 MRVNQALCRMLGRTEAEMLQMTLADVTHPDDVPMNMSLFNRCIEHGSSFTLEKRYLRPDG 384 +RVNQALCRMLGR+E EML MTLADVTHPDDVPMNMSLFNRCIE G SFTLEKRYLRPDG Sbjct: 594 LRVNQALCRMLGRSEEEMLGMTLADVTHPDDVPMNMSLFNRCIEDGRSFTLEKRYLRPDG 653 Query: 385 SAFWVSSDISRIVDDQGRPQAMIAVSTDITERRRAEEALRELNDTLEQRVVEEILERTRA 444 S FWVSSDISRIVD +GRPQAMIAVSTDITERRRAEEALRELNDTLEQRVVEEILER+RA Sbjct: 654 STFWVSSDISRIVDGEGRPQAMIAVSTDITERRRAEEALRELNDTLEQRVVEEILERSRA 713 Query: 445 EAALRQMQKMEAVGQLTGGVAHDFNNVLQIIGGNLQLLQTEPRLDERSRQRVRTAIGAVD 504 EAALRQMQKMEAVGQLTGGVAHDFNNVLQIIGGNLQLLQ++PRLDERSRQRVR AIGAVD Sbjct: 714 EAALRQMQKMEAVGQLTGGVAHDFNNVLQIIGGNLQLLQSDPRLDERSRQRVRIAIGAVD 773 Query: 505 RGAKLSSQLLAFARRQPLQPRSINLERVVQNMDDLLHRAVGENIEISTVITQDLWNSMLD 564 RGAKLSSQLLAFARRQPLQPRSINLERVVQNMDDLL RAVGENI+IST + DLWN+MLD Sbjct: 774 RGAKLSSQLLAFARRQPLQPRSINLERVVQNMDDLLRRAVGENIDISTRVAHDLWNTMLD 833 Query: 565 PNQVENLIINTAINARDAMPNGGRLTLQIDNVQLSDPAFLSQADLAPGDYVQLQISDNGA 624 PNQVENLIINTAINARDAMP+GGRLT+QIDNV+L DP FLSQADLAPG+YV+LQISDNGA Sbjct: 834 PNQVENLIINTAINARDAMPSGGRLTVQIDNVRLEDPVFLSQADLAPGEYVELQISDNGA 893 Query: 625 GMSPEVRERAFEPFFTTKREGEGTGLGLSMAYGFVKQSKGHISLHSEPGKGTTIRIYFPR 684 GMSPEVR+RAFEPFFTTK EGEGTGLGLSMAYGFVKQSKGHIS+HSE GKGTTIRIYFPR Sbjct: 894 GMSPEVRDRAFEPFFTTKLEGEGTGLGLSMAYGFVKQSKGHISIHSEQGKGTTIRIYFPR 953 Query: 685 CEEDEVLIDDSRDMDVGGGDETILVVEDDANLQLTVIDTLSSLGYRVLKADHGEQALAIL 744 C ++EV ID+ RD+ V GGDETILVVEDD NLQLTVIDTLSSLGYRVLKAD+GE+AL IL Sbjct: 954 CLDEEVRIDEVRDLTVHGGDETILVVEDDPNLQLTVIDTLSSLGYRVLKADNGERALEIL 1013 Query: 745 QSGMAVDMMFTDVVMPGSVPVTELARQARALLPDIEILFTSGYPRDAIVHEGRLDAGVEL 804 QSG+A+D++FTDVVMPGSVPVTELA+QAR L+PDIEILFTSGYPRD IVHEGRLDAGVEL Sbjct: 1014 QSGVAIDLVFTDVVMPGSVPVTELAQQARLLVPDIEILFTSGYPRDTIVHEGRLDAGVEL 1073 Query: 805 LSKPYRINQLAQRIRQMLSNRAHRIELAQLTRERDQANASATLHVLPVGDHLLLPEGQDA 864 LSKPYRINQLAQRIRQMLS RAHR+ELAQ+TRERDQA ASAT+HVLP + P Q Sbjct: 1074 LSKPYRINQLAQRIRQMLSQRAHRVELAQVTRERDQAAASATIHVLPRTER--EPVAQAD 1131 Query: 865 HFDQATATRGSAAMVAAAPE----QTQESASGLRLLVVEDNVDSQQLVCELLETLGHQAR 920 + G A+ P+ + QE A GLRLLVVEDN+DSQQLVCELLETLGHQAR Sbjct: 1132 PLVREAHGAGGASAAQPLPDYPRPEPQEDAGGLRLLVVEDNIDSQQLVCELLETLGHQAR 1191 Query: 921 GVISAEDAQQALGEQSFDVLFTDVNLPGMSGVDLAKSALERFPEMSVIFASGYGAMVARN 980 GVIS E+A QAL EQ FDVLFTDVNLPGMSGV+LAK+AL RFP+++VIFASGYG MVARN Sbjct: 1192 GVISGEEALQALEEQGFDVLFTDVNLPGMSGVELAKAALGRFPDLAVIFASGYGTMVARN 1251 Query: 981 VGFASHSLPKPYDIDQLQEILRKIA 1005 VGFA+H+LPKPYDIDQLQEIL KIA Sbjct: 1252 VGFAAHALPKPYDIDQLQEILDKIA 1276 Score = 184 bits (466), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 147/449 (32%), Positives = 221/449 (49%), Gaps = 58/449 (12%) Query: 1 MAEISWLRGAGLAAQMVLATDWATSPLGPLGQWSPTLRTTLNIVLHSPLPSLLVWGPSRQ 60 MA+ SWLRGAG AAQ++ A+DW SPLG QWSP LR TLN +L SP PSLLVWG +R Sbjct: 13 MADFSWLRGAGPAAQILTASDWTASPLGAPAQWSPMLRATLNQILLSPTPSLLVWGGARS 72 Query: 61 MLYNDAFAACIGAAHPAAFGAALTESALFAG----AARPCQEAIDSAFDGQPQQLGRLSL 116 MLYNDAFAAC+G+AHPAA GA LT A + G +A Q A+ ++ G PQQ L+L Sbjct: 73 MLYNDAFAACLGSAHPAALGAPLTTIAGWPGTDAESAGRLQSAVLASLAGAPQQAECLAL 132 Query: 117 FHDEAQSIVVASQWDLSCLPVWYQAEGERDGVAGVLCSFTRATGLDAALAASEASVRANN 176 A ++WDLSC+P+W E + +GVLC+F RA+G+ AL ++ Sbjct: 133 L---APPQAATARWDLSCVPLWELDEPAQAQASGVLCTFLRASGVQTALLHTD------- 182 Query: 177 AFVRQLLDSTDQGFFSIDR--DGLLTLCNAAFLQLLGYASEKDVLGRFIGEVVQPVVRNE 234 + L++ + F ++ R + + N+A+ +L G ++ V+G+ + P + +E Sbjct: 183 -LLSDLMEQS-PSFKAVVRGPEHVFERVNSAYFKLFG---DRPVIGQ-PARMALPELLDE 236 Query: 235 CAVLKAAREGISAQVDSEDFRRV----------DGSSFPVQYQAHPVWQ-DGQLQGALCT 283 + R + Q +E R+ DG+ +Q P+ +G++ G Sbjct: 237 NLFMLLDRVYQTGQAYTERGARLFLRRGVDSHFDGAVLDFVFQ--PIKNAEGKVDGIFIE 294 Query: 284 FIDLTERRRGMQALSWSENRLTAIFNQASVCFSELDLKGRYMRVNQALCRMLGR------ 337 D+TER +E RL + + E + V+ R+ G Sbjct: 295 GNDVTER-------MLAEERLRIVDRAGEIGIFEWFPDSGRLSVSDRFRRLWGLPPEGEV 347 Query: 338 TEAEMLQMTLADVTHPDDVPMNMSLFNRCIEHGSSFTL---EKRYLRPDGSAFWVSSDIS 394 T A+++ M + + HP N+ R E GS L E RPDG W++ Sbjct: 348 TAAQLVGM-IDEQFHP-----NLGT-ARIKEGGSRNPLEYTEYHITRPDGQQRWLARKGE 400 Query: 395 RIVDDQGRPQAMIAVSTDITERRRAEEAL 423 + DD + V+ D+T R+ E+AL Sbjct: 401 VVQDDPRTGSRYVGVAFDVTARKLMEQAL 429 >gi|300311617|ref|YP_003775709.1| PAS/PAC sensor hybrid histidine kinase response regulator protein [Herbaspirillum seropedicae SmR1] Length = 688 Score = 374 bits (959), Expect = e-104, Method: Compositional matrix adjust. Identities = 217/559 (38%), Positives = 321/559 (57%), Gaps = 21/559 (3%) Query: 284 FIDLTERRRGMQALSWSENRLTAIFNQASVCFSEL-DLKGRYMRVNQALCRMLGRTEAEM 342 F D+T RRR AL + R+ ++ + + DL V+ G Sbjct: 125 FRDVTARRRTEAALRENVERVQLALEAGAIIGTWIWDLPSDRFSVDDGFAAAFGIPAERG 184 Query: 343 LQMTLAD----VTHPDDVPMNMSLFNRCIEHGSSFTLEKRYLRPDGSAFWVSSDISRIVD 398 L D HPDD + + + G ++ + R R DG +W+ ++ + Sbjct: 185 LDGIKLDELMLSVHPDDRELLSARIREALARGGAYAHQYRTRRRDGRYYWLEANGRVEMT 244 Query: 399 DQGRPQAMIAVSTDI-------TERRRAEEALRELNDTLEQRVVEEILERTRAEAALRQM 451 G P V DI ER RA ALR LN+TLEQRV E AE ALRQ Sbjct: 245 PDGIPSKFPGVLIDIEGRRAVEAERDRALAALRTLNETLEQRVEERTAALLNAEEALRQA 304 Query: 452 QKMEAVGQLTGGVAHDFNNVLQIIGGNLQLLQT---EPRLDERSRQRVRTAIGAVDRGAK 508 QKMEAVGQLTGG+AHDFNN+L I G+L+L++ + R+ + R + A AV R A Sbjct: 305 QKMEAVGQLTGGLAHDFNNILAGISGSLELMKVRLAQGRIGDIERH-LNGAQSAVKRAAA 363 Query: 509 LSSQLLAFARRQPLQPRSINLERVVQNMDDLLHRAVGENIEISTVITQDLWNSMLDPNQV 568 L+ +LLAF+RRQ L P+ +L R+V M +L+ R+VG I + T+ LW++ +D Q+ Sbjct: 364 LTQRLLAFSRRQTLDPKPADLNRIVAGMHELIGRSVGPAIAVETIAAGGLWHTFVDIGQM 423 Query: 569 ENLIINTAINARDAMPNGGRLTLQIDNVQLSDPAFLSQADLAPGDYVQLQISDNGAGMSP 628 EN ++N INARDAMP+GGRLT++ N L D L Q + PG YV L +SD GAGMSP Sbjct: 424 ENALLNLCINARDAMPHGGRLTIETANRWLDDIGAL-QRGVPPGQYVSLSVSDTGAGMSP 482 Query: 629 EVRERAFEPFFTTKREGEGTGLGLSMAYGFVKQSKGHISLHSEPGKGTTIRIYFPR---- 684 EV RAF+PFFTTK G+GTGLGLSM YGF QS G + ++SE G+G + IY PR Sbjct: 483 EVVARAFDPFFTTKPTGQGTGLGLSMVYGFAGQSGGTVRIYSELGQGAMVCIYLPRHVGE 542 Query: 685 CEEDEVLIDDSRDMDVGGGDETILVVEDDANLQLTVIDTLSSLGYRVLKADHGEQALAIL 744 D++ + + + G +TILVV+D+ +++ ++ L LGY VL+A+ G AL ++ Sbjct: 543 GGVDDLALPEESHVPAAPGSKTILVVDDEPLVRMVTVEVLRDLGYSVLEAEDGPSALRVV 602 Query: 745 QSGMAVDMMFTDVVMPGSVPVTELARQARALLPDIEILFTSGYPRDAIVHEGRLDAGVEL 804 ++ +D++ TDV +P + +LA RA PD+ +LF +GY +A+++ G L+ G+++ Sbjct: 603 EACQEIDLLLTDVGLPNGMNGRQLADAIRAPRPDLPVLFVTGYAENAVLNHGHLERGMQV 662 Query: 805 LSKPYRINQLAQRIRQMLS 823 L+KP+ + LA+R+++++ Sbjct: 663 LTKPFAADVLARRVKELVG 681 >gi|300309882|ref|YP_003773974.1| multi-sensor hybrid histidine kinase [Herbaspirillum seropedicae SmR1] Length = 845 Score = 331 bits (848), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 179/414 (43%), Positives = 263/414 (63%), Gaps = 9/414 (2%) Query: 419 AEEALRELNDTLEQRVVEEILERTRAEAALRQMQKMEAVGQLTGGVAHDFNNVLQIIGGN 478 +E LR +N++LE V E E ALR QK+EA+GQLTGG+AHDFNN+L I G+ Sbjct: 430 SEARLRAINESLEAEVSARTRELMATEEALRHSQKIEAIGQLTGGLAHDFNNLLGGISGS 489 Query: 479 LQLLQT---EPRLDERSRQRVRTAIGAVDRGAKLSSQLLAFARRQPLQPRSINLERVVQN 535 L L++ + R +E R V A + R A L+ +LLAFARRQ L P+ + ++ Sbjct: 490 LDLMRVRLVQGRGEELLRY-VELAARSTQRAASLTQRLLAFARRQTLAPKPTRVNALISG 548 Query: 536 MDDLLHRAVGENIEISTVITQDLWNSMLDPNQVENLIINTAINARDAMPNGGRLTLQIDN 595 M++L+ R +G I + V LW + +D Q+E+ ++N INARDAMP GGRLT++ N Sbjct: 549 MEELIRRTIGPAIVLEVVGAGGLWPTFVDGPQLESALLNLCINARDAMPGGGRLTIETAN 608 Query: 596 VQLSDPAFLSQADLAPGDYVQLQISDNGAGMSPEVRERAFEPFFTTKREGEGTGLGLSMA 655 L D + + DL PG YV + ++D+G GM P+V RAF+PFFTTK G GTGLGLSM Sbjct: 609 KWLDD-RWAHERDLPPGQYVCISVTDSGVGMPPDVLARAFDPFFTTKPIGAGTGLGLSMV 667 Query: 656 YGFVKQSKGHISLHSEPGKGTTIRIYFPRCEEDEVLIDDSRDMD-VGGGD---ETILVVE 711 YGF +QS G + L+SE G+GTT+ IY PR + D D++ +D GD E +LVV+ Sbjct: 668 YGFARQSGGQVRLYSEVGQGTTVSIYLPRHQHDGDEQDEADALDETAAGDGNGEVVLVVD 727 Query: 712 DDANLQLTVIDTLSSLGYRVLKADHGEQALAILQSGMAVDMMFTDVVMPGSVPVTELARQ 771 D+A++++ V + LS GY VL+A+ G AL ILQS +D++ TDV +PG + ++A Sbjct: 728 DEASIRMLVAEILSDAGYDVLQAEDGPGALRILQSKQRIDLLITDVGLPGGLNGRQVADA 787 Query: 772 ARALLPDIEILFTSGYPRDAIVHEGRLDAGVELLSKPYRINQLAQRIRQMLSNR 825 RA PD+ +LF +GY +A G L+ G++L++KP+++ LA+R++ +L +R Sbjct: 788 GRAARPDLHVLFITGYAENAAFDNGHLERGMQLMTKPFKMEALARRVQSILESR 841 >gi|300311768|ref|YP_003775860.1| PAS/PAC sensor hybrid histidine kinase [Herbaspirillum seropedicae SmR1] Length = 552 Score = 327 bits (838), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 197/506 (38%), Positives = 284/506 (56%), Gaps = 41/506 (8%) Query: 327 VNQALCRMLGRTEAEMLQMTLADVTHPDDVPMNMSLFNRCIEHGSSFTLEKRYLRPDGSA 386 VN A M G + AE++ + P+ ++ R + E R +GS Sbjct: 71 VNNAFINMTGYSSAEVVGKNCRFLQGPETDRSVVAEVRRAVAERREIATELLNYRKNGST 130 Query: 387 FWVSSDISRIVDDQGRPQAMIAVSTDITERRRAEEALRELNDTLEQRVVEEILERTRAEA 446 FW + IS + D QG + + DI+ RR AE+AL Sbjct: 131 FWNALFISPVYDQQGNLKYFFSSQLDISRRRDAEQALG---------------------- 168 Query: 447 ALRQMQKMEAVGQLTGGVAHDFNNVLQIIGGNLQLLQTEPRLDE-------RSRQRVRTA 499 Q +KMEA+GQLTGG+AHDFNN+LQ+I G L ++ R D+ RS +R A Sbjct: 169 ---QARKMEALGQLTGGIAHDFNNLLQVITGYLDMINLALRSDKPDLARVARSADSIRKA 225 Query: 500 IGAVDRGAKLSSQLLAFARRQPLQPRSINLERVVQNMDDLLHRAVGENIEISTVITQDLW 559 G + A L+ QLLAFAR+Q L+ R+INL + + DL+ R +G +I + T + + LW Sbjct: 226 SG---KAAMLTQQLLAFARKQRLEGRTINLNSLTEGFTDLVSRTLGGDITVQTELARGLW 282 Query: 560 NSMLDPNQVENLIINTAINARDAMPNGGRLTLQIDNVQLSDPAFLSQADLAPGDYVQLQI 619 N LDP Q+E ++N INARDAM GR+ ++ N L+DP Q L G YV + + Sbjct: 283 NCRLDPTQMEVALLNVLINARDAMNGRGRVRIRTANEDLADPDRAVQLGLKEGLYVSIAV 342 Query: 620 SDNGAGMSPEVRERAFEPFFTTKREGEGTGLGLSMAYGFVKQSKGHISLHSEPGKGTTIR 679 +D+G G++P++ R +PFFTTK EG+GTGLGLSM YGFVKQS G + + S GTT+ Sbjct: 343 TDDGPGIAPDILPRVMDPFFTTKDEGKGTGLGLSMVYGFVKQSGGSVRITSGAEGGTTVT 402 Query: 680 IYFPRCEEDEV---LIDDSRDMDVGGGDETILVVEDDANLQLTVIDTLSSLGYRVLKADH 736 IYFP +D+V D+R GG E ILVV+D + L SLGYRV + Sbjct: 403 IYFP-ATQDQVGGGFEYDNRSQS-QGGQEHILVVDDRLEVAELAQTMLESLGYRVSMVNS 460 Query: 737 GEQALAILQSGMAVDMMFTDVVMPGSVPVTELARQARALLPDIEILFTSGYPRDAIVHEG 796 +AL +++SG VD++FTD++MPGS+ LAR+A+ +LP I++L T+GY +++ G Sbjct: 461 PAEALQLIRSGRPVDLLFTDLIMPGSMNGVVLAREAKRMLPTIKVLLTTGYASESLERHG 520 Query: 797 RLDAGVELLSKPYRINQLAQRIRQML 822 D +L KPYR ++LA++IR +L Sbjct: 521 -ADGEFPVLDKPYRHDELARKIRIVL 545 >gi|300313027|ref|YP_003777119.1| two component transmembrane sensor histidine kinase [Herbaspirillum seropedicae SmR1] Length = 454 Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 122/400 (30%), Positives = 179/400 (44%), Gaps = 60/400 (15%) Query: 323 RYMRVNQALCRMLGRTEAEMLQ--MTLADVTHPDDVP-MNMSLFNRCIEHGSSFTLEKRY 379 R V++ R+LG EML + HPDD + SL +E + E R+ Sbjct: 56 RLTFVSENASRVLGYEPCEMLDDPNFWFNHIHPDDTAQIFSSLAMLFVEDQKIY--EYRF 113 Query: 380 LRPDGSAFWVSSDISRIVDDQGRPQAMIAVSTDITERRRAEEALRELNDTLEQRVVEEIL 439 +GS W+ + I D G PQ +I + TDIT R+ E+ L+ + EQR + E L Sbjct: 114 RTSNGSYLWMHDTLRLIRDPDGTPQEVIGLMTDITGRKEMEDTLQRQAE--EQRKLIEQL 171 Query: 440 ERTRAEAALRQMQKMEAVGQLTGGVAHDFNNVLQIIGGNLQLLQTEPRLDERSRQRVRTA 499 + A+A L Q +K+ ++GQL GVAH+ NN + + NL L Q + Sbjct: 172 KM--AQAQLMQSEKLASIGQLAAGVAHEINNPIGFVSANLNTLGNYVATLLEGIQLHQCL 229 Query: 500 IGAVDRGAKLSSQLLAFARR-----------QPLQPRSINLERV---VQNMDDL------ 539 G A QL +F R + L + L+RV VQ++ D Sbjct: 230 QGGALPAAMAQEQLRSFEARADLAFLSEDVTELLAESNEGLQRVRNIVQSLKDFSRIGES 289 Query: 540 ------LHRAVGENIEIS--------TVITQ--DLWNSMLDPNQVENLIINTAINARDAM 583 LHR + + I+ +++ Q +L +++ + +N +NA A+ Sbjct: 290 NWQMTDLHRGLDSTLNIANNELKYKVSIVKQYGELPLVKCLASELNQVFMNLLVNAAQAI 349 Query: 584 PNGGRLTLQIDNVQLSDPAFLSQADLAPGDYVQLQISDNGAGMSPEVRERAFEPFFTTKR 643 G +T+ GD V + ISD G G++PE R FEPFFTTK Sbjct: 350 SERGTVTI---------------CTARAGDKVSVSISDTGHGIAPENLNRIFEPFFTTKP 394 Query: 644 EGEGTGLGLSMAYGFVKQSKGHISLHSEPGKGTTIRIYFP 683 G GTGLGLS++YG VK+ G I + S PG GTT I P Sbjct: 395 VGSGTGLGLSLSYGIVKKHGGDIRVSSAPGCGTTFTIELP 434 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.319 0.134 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,910,476 Number of extensions: 117482 Number of successful extensions: 652 Number of sequences better than 1.0e-08: 26 Number of HSP's gapped: 629 Number of HSP's successfully gapped: 29 Length of query: 1007 Length of database: 1,619,870 Length adjustment: 95 Effective length of query: 912 Effective length of database: 1,170,045 Effective search space: 1067081040 Effective search space used: 1067081040 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 135 (56.6 bits)