BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2025.p (758 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311488|ref|YP_003775580.1| multidrug ABC transporter ATPas... 1413 0.0 gi|300312189|ref|YP_003776281.1| bacteriocin/lantibiotic (cyclol... 304 1e-83 gi|300312733|ref|YP_003776825.1| multidrug ABC transporter ATPas... 282 7e-77 gi|300313154|ref|YP_003777246.1| Fe-S cluster assembly ABC trans... 274 2e-74 gi|300312861|ref|YP_003776953.1| multidrug ABC transporter ATPas... 266 5e-72 >gi|300311488|ref|YP_003775580.1| multidrug ABC transporter ATPase/permease [Herbaspirillum seropedicae SmR1] Length = 758 Score = 1413 bits (3657), Expect = 0.0, Method: Compositional matrix adjust. Identities = 729/758 (96%), Positives = 740/758 (97%) Query: 1 MTTDSIPSATASLPERWQTETAARLAPGEAVLAWLELDLDAQLHFKPSLLLATDTRLLAC 60 MTTDS+PSA SLPERWQTE AARLA GE VLAWLELDLDAQL F SL+LATD RLLA Sbjct: 1 MTTDSLPSAHTSLPERWQTEIAARLAAGETVLAWLELDLDAQLQFNRSLVLATDRRLLAS 60 Query: 61 GPDGQPAQHWEYRPELQLKHYDHAGVGTLELCDGAGRLAAWRYTLAQNPQALRLIKLFEQ 120 P GQ Q W YRP+LQLKH+DHAGVGTLELCDGAGRLAAWRYTL+QNPQALRLIKLFEQ Sbjct: 61 PPAGQAWQEWAYRPDLQLKHHDHAGVGTLELCDGAGRLAAWRYTLSQNPQALRLIKLFEQ 120 Query: 121 QRELLASGVTAEEEGDVCPTCKAVLPEGQDTCAICPETKEAPPSTWALFRLSRFAKPYKG 180 QR+LLASGV AEEEGDVCP CKAVLPEGQ+TCAICPETKEAPPSTWALFRLSRFAKPYKG Sbjct: 121 QRDLLASGVQAEEEGDVCPNCKAVLPEGQETCAICPETKEAPPSTWALFRLSRFAKPYKG 180 Query: 181 SLLLGFLLTLASTAATLVPPYMTMPLMDNVLIPFQNGAPIDTHLATLYLSGLLGAALLAW 240 SLLLGFLLTLASTAATLVPPYMTMPLMDNVLIPFQNGAPIDTHLATLYLSGLLGAA+LAW Sbjct: 181 SLLLGFLLTLASTAATLVPPYMTMPLMDNVLIPFQNGAPIDTHLATLYLSGLLGAAVLAW 240 Query: 241 GLGWARTYILALVSERIGADLRTTTYAHLLRLSQEYFGGKRTGDLMARIGSETDRICVFL 300 GLGWARTYILALVSERIGADLRTTTY+HLLRLSQEYFGGKRTGDLMARIGSETDRICVFL Sbjct: 241 GLGWARTYILALVSERIGADLRTTTYSHLLRLSQEYFGGKRTGDLMARIGSETDRICVFL 300 Query: 301 SLHLLDFAIDVLMIIMTAAILISINPWLALVTLLPLPFIAWMIHVVRDRLRHGFEKIDRI 360 SLHLLDFAIDVLMIIMTAAILISINPWLALVTLLPLPFIAWMIHVVRDRLRHGFEKIDRI Sbjct: 301 SLHLLDFAIDVLMIIMTAAILISINPWLALVTLLPLPFIAWMIHVVRDRLRHGFEKIDRI 360 Query: 361 WSEVTNVLADTIPGIRVVKAFAQEKREVARFREANRHNLMVNDRVNKIWSLFTPTVTFLT 420 WSEVTNVLADTIPGIRVVKAFAQEKREVARFREANRHNLMVNDRVNKIWSLFTPTVTFLT Sbjct: 361 WSEVTNVLADTIPGIRVVKAFAQEKREVARFREANRHNLMVNDRVNKIWSLFTPTVTFLT 420 Query: 421 EVGLLVVWVFGIWQVSSNQITVGVLTAFLAYISRFYTRLDSMSRIVSVTQKAAAGAKRIF 480 EVGLLVVWVFGIWQVSSNQITVGVLTAFLAYISRFYTRLDSMSRIVSVTQKAAAGAKRIF Sbjct: 421 EVGLLVVWVFGIWQVSSNQITVGVLTAFLAYISRFYTRLDSMSRIVSVTQKAAAGAKRIF 480 Query: 481 DILDHVSSVPEPANPVHLEKVEGAIEVRNIGFRYGNRAVIRNMSLSIAPGEMIGLVGHSG 540 DILDHVSSVPEPANPVHLEKV+GAIEVRNIGFRYGNRAVIRNMSLSIAPGEMIGLVGHSG Sbjct: 481 DILDHVSSVPEPANPVHLEKVQGAIEVRNIGFRYGNRAVIRNMSLSIAPGEMIGLVGHSG 540 Query: 541 SGKSTMVNLICRFYDVSEGAIRIDGVDIRSLPISEYRRNIGLVLQEPFLFFGTIAENIAY 600 SGKSTMVNLICRFYDVSEGAIRIDGVDIRSLPISEYRRNIGLVLQEPFLFFGTIAENIAY Sbjct: 541 SGKSTMVNLICRFYDVSEGAIRIDGVDIRSLPISEYRRNIGLVLQEPFLFFGTIAENIAY 600 Query: 601 GKPEATREEIIAAARAAHAHEFILRLPQGYDSLVGERGQALSGGERQRISIARALLIDPR 660 GKPEATREEIIAAARAAHAHEFILRLPQGYDSLVGERGQALSGGERQRISIARALLIDPR Sbjct: 601 GKPEATREEIIAAARAAHAHEFILRLPQGYDSLVGERGQALSGGERQRISIARALLIDPR 660 Query: 661 ILILDEATSSVDTTTEKEIQKALDNLVQGRTTIAIAHRLSTLRKADRLVVLDRGQVVEVG 720 ILILDEATSSVDTTTEKEIQKALDNLVQGRTTIAIAHRLSTLRKADRLVVLDRGQVVEVG Sbjct: 661 ILILDEATSSVDTTTEKEIQKALDNLVQGRTTIAIAHRLSTLRKADRLVVLDRGQVVEVG 720 Query: 721 NHEELMAREGHYYKLYQAQARNPDGEAEVSVSEEEKGE 758 NHEELMAREGHYYKLYQAQARNP+GEAEVSVSEEEKGE Sbjct: 721 NHEELMAREGHYYKLYQAQARNPEGEAEVSVSEEEKGE 758 >gi|300312189|ref|YP_003776281.1| bacteriocin/lantibiotic (cyclolysin-type) secretion ABC transporter protein [Herbaspirillum seropedicae SmR1] Length = 726 Score = 304 bits (779), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 208/590 (35%), Positives = 323/590 (54%), Gaps = 38/590 (6%) Query: 165 TWALFRLSRFAKPYKGSLLLGFLLTLASTAATLVPPYMTMPLMDNVLIPFQNGAPIDTHL 224 +W + + ++ K LL+ +L L L+ P +MD VL+ N A + ++ Sbjct: 150 SWFIPAVVKYRKTLAEVLLISLVLQLIG----LITPMFFQVVMDKVLV---NHAMMTLNV 202 Query: 225 ATLYLSGLLGAALLAWGLGWARTYILALVSERIGADLRTTTYAHLLRLSQEYFGGKRTGD 284 + GL+ A + L RT I A S +I +L + ++HLL L YF +R GD Sbjct: 203 IAV---GLIAATVFEAVLTGIRTAIFANASSKIDVELGSRLFSHLLSLPLSYFQVRRAGD 259 Query: 285 LMARIGSETDRICVFLSLHLLDFAIDVLMIIMTAAILISINPWLALVTLLPLPFIAWMIH 344 +AR+ E + I FL+ + + +D++ + +++ + L+L+ L +P + Sbjct: 260 SIARV-RELENIRSFLTGNAMTLVLDIMFSFVFLGVMLWYSVSLSLIVLASIPVYVLLSL 318 Query: 345 V----VRDRLRHGFEKIDRIWSEVTNVLADTIPGIRVVKAFAQEKR-------EVARFRE 393 V +R+RL F K +E + L +T+ G+ VKA A E R ++A + Sbjct: 319 VFTPLLRERLNDKFNK----SAENQSFLVETLTGMDTVKAMAVEPRWQQKWDKQLAAYVA 374 Query: 394 ANRHNLMVNDRVNKIWSLFTPTVTFLTEVGLLVVWVFGIWQVSSNQITVGVLTAFLAYIS 453 A + ++ + S V+ L VG++ W+ G V N+++VG L AF Sbjct: 375 AG----LTTTNISLLASGAVGLVSKLVTVGIM--WL-GALLVVKNEMSVGELVAFNMLAG 427 Query: 454 RFYTRLDSMSRIVSVTQKAAAGAKRIFDILDHVSSVPEPANPVHLEKVEGAIEVRNIGFR 513 + + + ++++ + Q+ R+ D+LD + V N L +V GAI + FR Sbjct: 428 QVASPILRLAQLWNDFQQIGISMSRLADVLDARTEVA--GNRTRLPRVNGAISFDLVSFR 485 Query: 514 YGNRA--VIRNMSLSIAPGEMIGLVGHSGSGKSTMVNLICRFYDVSEGAIRIDGVDIRSL 571 Y VIR +SL I PGE+IG+VG SGSGKST+ L+ R Y G I +DG DI + Sbjct: 486 YRPETPEVIRGLSLQIRPGEVIGIVGRSGSGKSTLAKLVQRLYICETGRISVDGQDIAII 545 Query: 572 PISEYRRNIGLVLQEPFLFFGTIAENIAYGKPEATREEIIAAARAAHAHEFILRLPQGYD 631 + R+ IG+VLQE LF +I +NIA P E+II AA+ A AH+FI LP+GYD Sbjct: 546 DTASLRQQIGVVLQENTLFSRSIRDNIALADPSTPIEQIIEAAKLAGAHDFICELPEGYD 605 Query: 632 SLVGERGQALSGGERQRISIARALLIDPRILILDEATSSVDTTTEKEIQKALDNLVQGRT 691 ++VGE+G LSGG+RQRI+IARAL+ +P ILI DEATS++D +EK IQ + + GRT Sbjct: 606 TMVGEQGSGLSGGQRQRIAIARALITNPGILIFDEATSALDYESEKIIQDNMRQICAGRT 665 Query: 692 TIAIAHRLSTLRKADRLVVLDRGQVVEVGNHEELMAREGHYY-KLYQAQA 740 + IAHRLS +R ADR++V++RG+V E G+H+EL+ G Y L++ QA Sbjct: 666 VLIIAHRLSAVRDADRIIVMERGRVAESGSHDELIDLPGGIYAHLHRLQA 715 >gi|300312733|ref|YP_003776825.1| multidrug ABC transporter ATPase/permease [Herbaspirillum seropedicae SmR1] Length = 614 Score = 282 bits (721), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 210/603 (34%), Positives = 324/603 (53%), Gaps = 25/603 (4%) Query: 150 DTCAICPETKEAPPSTWALFRLSRFAKPYKGSLLLGFLLTLASTAATLVPPYMTMPLMDN 209 D A P +++ + AL L F PYK LL L + + AATL PY ++D Sbjct: 20 DHAADSPTARKS--ALAALRGLLPFLAPYKKQFLLAGLALVVAAAATLAVPYAFKQMID- 76 Query: 210 VLIPFQNGAPIDTHLATLYLSGLLGAALLAWGLGWARTYILALVSERIGADLRTTTYAHL 269 + F LY L G A + R Y+++ + ER+ ADLR+ YAH+ Sbjct: 77 --LGFGAAGSKSASHINLYFLALFGVACILGVATALRFYMVSWLGERVTADLRSAVYAHV 134 Query: 270 LRLSQEYFGGKRTGDLMARIGSETDRICVFLSLHL-------LDFAIDVLMIIMTAAILI 322 + S E+F +TG++++R+ ++T I + + L F + M+ T+A L Sbjct: 135 VTQSPEFFETTKTGEVLSRLTTDTTLIQTLVGTSISMALRNALLFIGGMSMLFFTSARLT 194 Query: 323 SINPWLALVTLLPLPFIAWMIHVVRDRLRHGFEKIDRIWSEVTNVLADTIPGIRVVKAFA 382 SI + +LP+ F + +L + DR+ ++ + + + + + V+AF Sbjct: 195 SIIIVMLAAVVLPIVFYGRRVR----KLSRASQ--DRV-ADASAMAGEILNAMPTVQAFT 247 Query: 383 QEKREVARFREANRHNLMVNDRVNKIWSLFTPTVTFLTEVGLLVVWVFGIWQVSSNQITV 442 E+ E RF ++ + SL T L ++ V G V ++ Sbjct: 248 HEEIEARRFAQSVERAFGTAMERVRARSLLTVVAILLVFGAIVFVLWLGAHAVMEGSMSG 307 Query: 443 GVLTAFLAYISRFYTRLDSMSRIVSVTQKAAAGAKRIFDILDHVSSVPEPANPVHL--EK 500 G L F+ Y S L ++S ++ TQ+AA +R+ D+L S V P L Sbjct: 308 GELGQFILYASLVAGSLGALSEVMGDTQRAAGATERLLDLLAAHSPVQSVLLPEKLPPRT 367 Query: 501 VEGA-IEVRNIGFRYGNRA---VIRNMSLSIAPGEMIGLVGHSGSGKSTMVNLICRFYDV 556 GA + V+ + F Y +R + +SL++ PGE + +VG SG+GK+T+ L+ RFYD Sbjct: 368 ANGAALTVQGVDFHYPSRPGHPSLTQLSLTVQPGETVAIVGPSGAGKTTLFQLLLRFYDP 427 Query: 557 SEGAIRIDGVDIRSLPISEYRRNIGLVLQEPFLFFGTIAENIAYGKPEATREEIIAAARA 616 +G I +DGVDIR L + R IG+V Q+ +F ENI +G+PEA+ E+IAAA+ Sbjct: 428 QQGQILLDGVDIRYLDLQALRGAIGIVPQDTVIFSANAMENIRFGRPEASDAEVIAAAQM 487 Query: 617 AHAHEFILRLPQGYDSLVGERGQALSGGERQRISIARALLIDPRILILDEATSSVDTTTE 676 A AHEFI RLP Y +GERG LSGG+RQRI+IARALL +P +L+LDEATS++D +E Sbjct: 488 AAAHEFIERLPGSYACFLGERGVRLSGGQRQRIAIARALLKNPPLLLLDEATSALDAESE 547 Query: 677 KEIQKALDNLVQGRTTIAIAHRLSTLRKADRLVVLDRGQVVEVGNHEELMAREGHYYKLY 736 + +Q AL+ + GRTT+ IAHRL+T+++ADR++VL+ G++VE G H EL+AR+G Y L Sbjct: 548 RLVQGALEAAMVGRTTLVIAHRLATVQRADRIIVLEHGRIVESGTHAELVARDGLYAGLA 607 Query: 737 QAQ 739 Q Sbjct: 608 ALQ 610 >gi|300313154|ref|YP_003777246.1| Fe-S cluster assembly ABC transporter permease/ATPase [Herbaspirillum seropedicae SmR1] Length = 634 Score = 274 bits (700), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 172/506 (33%), Positives = 273/506 (53%), Gaps = 8/506 (1%) Query: 246 RTYILALVSERIGADLRTTTYAHLLRLSQEYFGGKRTGDLMARIGSETDRICVFLSLHLL 305 R + A V++R + + HL LS + ++TG + I T + +S L Sbjct: 102 RELMFARVTQRAVRTIALQVFRHLHALSLRFHLNRQTGGMTRDIERGTRGVSSLVSYTLF 161 Query: 306 DFAIDVLMIIMTAAILIS-INPWLALVTLLPLP-FIAWMIHVV--RDRLRHGFEKIDRIW 361 ++ I + A LI+ + W +++T L +I + I V R R ++D Sbjct: 162 SILPTLIEIALVLAYLITHYDVWFSVITAGALVCYILFTITVTEWRTHFRRTMNELD--- 218 Query: 362 SEVTNVLADTIPGIRVVKAFAQEKREVARFREANRHNLMVNDRVNKIWSLFTPTVTFLTE 421 S D++ VK F E+ E R+ E + + SL + + Sbjct: 219 SHANTRAIDSLLNYETVKYFGNEEFEARRYDEGLQRYERAAVKSQSSLSLLNTGQSAIIA 278 Query: 422 VGLLVVWVFGIWQVSSNQITVGVLTAFLAYISRFYTRLDSMSRIVSVTQKAAAGAKRIFD 481 + + ++ V +T+G + A++ + Y L+ + + +++ A +R+F Sbjct: 279 IAVTLILWRATVGVIDGSMTLGDMVLVNAFMIQLYIPLNFLGVLYREIKQSLADMERLFS 338 Query: 482 ILDHVSSVPEPANPVHLEKVEGAIEVRNIGFRYG-NRAVIRNMSLSIAPGEMIGLVGHSG 540 +L+ V + A+ L+ + ++ F Y NR ++ ++ ++ G +VGHSG Sbjct: 339 LLEEHREVADSADAKPLKTQGANLHFDHVDFSYERNRQILFDVDFTVQAGTTTAVVGHSG 398 Query: 541 SGKSTMVNLICRFYDVSEGAIRIDGVDIRSLPISEYRRNIGLVLQEPFLFFGTIAENIAY 600 SGKST+ L+ RFYDV GAIRIDG D+R++ + R+ IG+V Q+ LF TI NIAY Sbjct: 399 SGKSTLSRLLYRFYDVDAGAIRIDGQDLRTVTQASLRQAIGIVPQDTVLFNDTIEYNIAY 458 Query: 601 GKPEATREEIIAAARAAHAHEFILRLPQGYDSLVGERGQALSGGERQRISIARALLIDPR 660 GKP ATRE+I+AAA+AA+ H+FI LP GY S+VGERG LSGGE+QR++IAR LL DP Sbjct: 459 GKPGATREQIVAAAKAAYIHDFIESLPDGYASMVGERGLKLSGGEKQRVAIARTLLKDPA 518 Query: 661 ILILDEATSSVDTTTEKEIQKALDNLVQGRTTIAIAHRLSTLRKADRLVVLDRGQVVEVG 720 ILI DEATS++D+ E+ IQ+ L+ + + RTT+ IAHRLST+ A +++VLD G++VE G Sbjct: 519 ILIFDEATSALDSRAEQAIQQQLEEIARERTTLVIAHRLSTIVNAQQILVLDHGRIVERG 578 Query: 721 NHEELMAREGHYYKLYQAQARNPDGE 746 H L+ G Y +++ Q D E Sbjct: 579 THAGLLMAGGLYAQMWLRQQAGADEE 604 >gi|300312861|ref|YP_003776953.1| multidrug ABC transporter ATPase/permease [Herbaspirillum seropedicae SmR1] Length = 578 Score = 266 bits (680), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 188/578 (32%), Positives = 300/578 (51%), Gaps = 22/578 (3%) Query: 170 RLSRFAKPYKGSLLLGFLLTLASTAATLVPPYMTMPLMDNVLIPFQNGAPIDTHLATLYL 229 RL+ PYK L + F+ + + A V PY+ L+D + G P +L+L Sbjct: 8 RLAALHWPYKKRLAVAFIAMIVTAATEPVVPYIFQVLLDKGFV----GKPA----FSLWL 59 Query: 230 S--GLLGAALLAWGLGWARTYILALVSERIGADLRTTTYAHLLRLSQEYFGGKRTGDLMA 287 ++G + + +Y++ VS RI +LR +A +L L ++ G ++ Sbjct: 60 VPVAVIGIFFIRGIATFTSSYMMTWVSTRILNELRRQMFARMLDLPLHFYATNTVGKVIN 119 Query: 288 RIGSETDRICVFLSLHLLDFAIDVLMIIMTAAILISINPWLALVTLLPLPFIAWMIHVVR 347 + E +I ++ L ++ A L+ +N L +VTL+ LP + ++ Sbjct: 120 SMMFEVQQIIDMVTKVFTSILRSALTVLGLLAWLLYLNWVLTIVTLVLLPLVTLVVRTTG 179 Query: 348 DRLRHGFEKIDR----IWSEVTNVLADTIPGIRVVKAFAQEKREVARFREANRHNLMVND 403 RL+ K++R + +E+T V+ +T +V+K F + E RF + Sbjct: 180 KRLK----KLNRDSLAVNAEMTQVIEETTRAQQVIKIFGGQDYEKERFNRRAENLRSYTM 235 Query: 404 RVNKIWSLFTPTVTFLTEVGLLVVWVFGIWQVSSNQITVGVLTAFLAYISRFYTRLDSMS 463 R+ +S P +T + VV V + Q + QITVG +F+ + T L ++ Sbjct: 236 RMTAAFSSTVPITQLMTATAVAVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLA 295 Query: 464 RIVSVTQKAAAGAKRIFDILDHVSSVPEPANPVHLEKVEGAIEVRNIGFRY--GNRAVIR 521 I Q+ A A+ ++ ++D + + G ++ +GF Y + ++ Sbjct: 296 EINGPLQRGMAAAEEVYKLIDKTTE--RITGEALAGRATGQLDFVEVGFAYPGHEQLALK 353 Query: 522 NMSLSIAPGEMIGLVGHSGSGKSTMVNLICRFYDVSEGAIRIDGVDIRSLPISEYRRNIG 581 N++L + GE I VG SG GKST+V+LI FY S G IR+DG DI ++ + R+ I Sbjct: 354 NINLHVEAGETIAFVGMSGGGKSTLVSLIPGFYSCSSGEIRLDGRDIETISLPSLRQQIA 413 Query: 582 LVLQEPFLFFGTIAENIAYGKPEATREEIIAAARAAHAHEFILRLPQGYDSLVGERGQAL 641 +V Q LF T+A NIAYG + AA AAH + + LP+G + +G+ G L Sbjct: 414 MVNQNTVLFDDTLAANIAYGDANPDPARVEAAVEAAHLTDVVAGLPEGLQTRLGDNGSRL 473 Query: 642 SGGERQRISIARALLIDPRILILDEATSSVDTTTEKEIQKALDNLVQGRTTIAIAHRLST 701 SGG+RQR++IARA+ D ILILDEATS++DT +E+ +Q ALD L+QGRTT IAHRLST Sbjct: 474 SGGQRQRVAIARAIYKDAPILILDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLST 533 Query: 702 LRKADRLVVLDRGQVVEVGNHEELMAREGHYYKLYQAQ 739 + +ADR+VVL GQ+ E+G H+ L+ +EG Y LY+ Q Sbjct: 534 IERADRIVVLAHGQIAEIGTHQALLEQEGVYANLYRLQ 571 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.322 0.137 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,205,349 Number of extensions: 87380 Number of successful extensions: 654 Number of sequences better than 1.0e-08: 132 Number of HSP's gapped: 467 Number of HSP's successfully gapped: 146 Length of query: 758 Length of database: 1,619,870 Length adjustment: 93 Effective length of query: 665 Effective length of database: 1,179,515 Effective search space: 784377475 Effective search space used: 784377475 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 134 (56.2 bits)