BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1964.p (861 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311426|ref|YP_003775518.1| ATP-dependent Clp protease subu... 1704 0.0 gi|300310082|ref|YP_003774174.1| ClpA/B-type chaperone protein [... 504 e-144 gi|300313318|ref|YP_003777410.1| ClpA/B-type chaperone ATPase [H... 495 e-141 gi|300310731|ref|YP_003774823.1| ATP-dependent protease ATP-bind... 308 9e-85 >gi|300311426|ref|YP_003775518.1| ATP-dependent Clp protease subunit [Herbaspirillum seropedicae SmR1] Length = 861 Score = 1704 bits (4413), Expect = 0.0, Method: Compositional matrix adjust. Identities = 849/861 (98%), Positives = 858/861 (99%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQDDGGARSLLQRAGVNVNGL 60 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQ+DGGARSLLQRAGVNVNGL Sbjct: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 Query: 61 ISALQAALKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 +ALQAA+KRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS Sbjct: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 Query: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV Sbjct: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL Sbjct: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK Sbjct: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH Sbjct: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI Sbjct: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSTAQGGQQLKEEIE 480 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKS+AQGGQQLKEEIE Sbjct: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVVSEKPKLVRTQVGAEE 540 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGV +EKPKLVRTQVGAEE Sbjct: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKTEKPKLVRTQVGAEE 540 Query: 541 IAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPS 600 IAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPS Sbjct: 541 IAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPS 600 Query: 601 KPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVG 660 KPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVG Sbjct: 601 KPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVG 660 Query: 661 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 720 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV Sbjct: 661 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 720 Query: 721 MTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAK 780 MTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAK Sbjct: 721 MTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAK 780 Query: 781 IQLRILEQRLAKLEIGLQISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAG 840 IQLRILEQRLAKLEIGL+ISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAG Sbjct: 781 IQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAG 840 Query: 841 KFGPKDVVQVDVQNGQLAFSK 861 KFGPKDVV+VDV +GQL+FSK Sbjct: 841 KFGPKDVVRVDVDHGQLSFSK 861 >gi|300310082|ref|YP_003774174.1| ClpA/B-type chaperone protein [Herbaspirillum seropedicae SmR1] Length = 893 Score = 504 bits (1299), Expect = e-144, Method: Compositional matrix adjust. Identities = 297/680 (43%), Positives = 422/680 (62%), Gaps = 31/680 (4%) Query: 144 RGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 203 +GG V + G+ AL +YT +LT+RAR GK+DPV+GRD EIR+A+ +L RR +NNP+ Sbjct: 179 QGGDPVGEMRAGGRTPALDQYTTNLTQRAREGKIDPVVGRDGEIRQAVDILLRRRQNNPI 238 Query: 204 LIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKAVL 263 L GE GVGKTA+VEGLA RI +VP +L+ + +LDM L AGA +GEFE RLK V+ Sbjct: 239 LTGEAGVGKTAVVEGLALRIAQDDVPQALQGVEIHTLDMGLLQAGASVKGEFENRLKGVI 298 Query: 264 KEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYI 323 E+ + I+FIDE HTM+GAG G DA N+LKPALARGEL + ATT EY++Y Sbjct: 299 DEVKKSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYF 358 Query: 324 EKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITD 383 EKDAAL RRFQ I V+EP+ E A+LR + E H GV + D AI A LSHRYI+ Sbjct: 359 EKDAALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAITEAVRLSHRYISG 418 Query: 384 RFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKRLQL 443 R LPDKAI ++D A +K+ + ++ P ++ + RRL +L E A++RE + +L Sbjct: 419 RQLPDKAISVLDTACAKVALGQNATPARLEGVTRRLERLAAEIAALERETRSGASHATRL 478 Query: 444 IEEEIEKLE--REYADLEEIWKAEKSTAQGGQQLKEEIEKVRLQMEEATRKSDWQKVSEL 501 E + + + E +L++ W+ E+ +L I+ R +EEA ++S + S Sbjct: 479 GELQAQHAQAIAEQTELQQRWEQER-------ELNGRIQAARAALEEANQESASSQDSAA 531 Query: 502 KYGKLAELEAALEVQNKKDAAGVVSEKPKLVRTQVGAEEIAEIVARATGIPVSRMMQGER 561 +L +L A L K+ G E P +V QV +AEIVA TGIP+ +M++ E Sbjct: 532 ARSELQQLLAQL-----KEHQG---ETP-MVPVQVDGHVVAEIVAGWTGIPLGKMVKDEI 582 Query: 562 EKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCK 621 + +L ++ +L ERV+GQ +A AV+ +R SRA L DP KP G F+F+GP+GVGKTE Sbjct: 583 KTVLGLDALLKERVLGQPQATAAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETAL 642 Query: 622 ALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILL 681 ALA L+ E +I I+MSE+ E H+V+ L G+PPGYVGY EGG LTEAVRR PYSV+LL Sbjct: 643 ALADVLYGGERKLITINMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLL 702 Query: 682 DEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKI-------QSME 734 DE+EKAHPDV + QV D G M DG+GR +DFKNT+I++TSN+ S ++ + E Sbjct: 703 DEVEKAHPDVLELFFQVFDKGVMDDGEGREIDFKNTIIILTSNVASSQLMQACLNKSAAE 762 Query: 735 DSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAKIQL-----RILEQR 789 P + + + ++ F+P F+ R+ +++ ++ + + + I K++L RI E Sbjct: 763 LPTPDELDVLIRPQLVKAFKPAFLGRL-KVIPYYPISDEVLEQIIKLKLGRIANRIAENH 821 Query: 790 LAKLEIGLQISEAGLQKIAE 809 A+ + EA L + E Sbjct: 822 KAEFSYDKALVEAVLARCTE 841 >gi|300313318|ref|YP_003777410.1| ClpA/B-type chaperone ATPase [Herbaspirillum seropedicae SmR1] Length = 889 Score = 495 bits (1274), Expect = e-141, Method: Compositional matrix adjust. Identities = 335/843 (39%), Positives = 478/843 (56%), Gaps = 81/843 (9%) Query: 1 MRLDKLTTKLQE----ALADAQSQAVGHDNQYIEPVHLILALLNQDDGGARSLLQRAGVN 56 + L L KL E A A + V + ++ HL LALL Q + +R+G++ Sbjct: 3 INLRSLICKLNETARLATERAATLCVSCSHYEVDLEHLFLALLEQPQSDFSLIARRSGID 62 Query: 57 VNGL-------ISALQAALKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASE 109 +GL IS + R P +S + + L+A L + + V S Sbjct: 63 TDGLQADLEHEISTFREGNARTPVLSPHLRTLFENGWLIASL--------EESNPSVRSA 114 Query: 110 MVLLGLVDDKSDAGRAARENG-----------------LTRKSLEAAITAVRG-GASVSS 151 +LL L+ +SD + A LT S+E+A G G S Sbjct: 115 HLLLALLT-QSDLSQLAYRGSKLFAKFKIDEIKHNLHRLTEGSVESAAIGKTGQGGDRES 173 Query: 152 QQDE---------GQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNP 202 D G+ AL +YT LT+RAR GK+DPVIGRD EIR+A+ +L RR +NNP Sbjct: 174 GGDPMGELKQLRIGKMTALDQYTTQLTQRARDGKIDPVIGRDAEIRQAVDILLRRRQNNP 233 Query: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKAV 262 +L GE GVGKTA+VEGLA RI G+VP L+ + +LDM L AGA +GEFE RLK V Sbjct: 234 ILTGEAGVGKTAVVEGLALRIAQGDVPKPLQGVEIHTLDMGLLQAGASVKGEFESRLKTV 293 Query: 263 LKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQY 322 + E+ + I+FIDE HTM+GA G DA N+LKPALARGEL + ATT EY++Y Sbjct: 294 IDEVKKSAYPIILFIDEAHTMIGAAGQAGQSDAANLLKPALARGELRTIAATTWSEYKKY 353 Query: 323 IEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYIT 382 EKDAAL RRFQ I V+EP + A+LR + E H GV + D A+V A LSHRYI+ Sbjct: 354 FEKDAALARRFQVIKVEEPGEDVACAMLRAMVPLMEQHFGVRVYDEAVVEAVRLSHRYIS 413 Query: 383 DRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQ--KR 440 R LPDKAI ++D A +K+ + D+ P +++ + RRL +L E A++RE SQ +R Sbjct: 414 GRQLPDKAISVLDTACAKVALGRDATPALLEGVTRRLERLDTEISALRREAASGSQHEER 473 Query: 441 L-QLIEEEIEKLEREYADLEEIWKAEKSTAQGGQQLKEEIEKVRLQMEE-ATRKSDWQKV 498 L L+++ + + E DL+ W+ E+ +L E I++ R +E T + V Sbjct: 474 LASLLDQHVCAVA-ERHDLQLRWEQER-------ELNERIQQARATLENPGTGDARGGNV 525 Query: 499 SELKYGKLAELEAALE--VQNKKDAAGVVSEKPKLVRTQVGAEEIAEIVARATGIPVSRM 556 + AEL+ L+ Q + DA +V QV +AEIVA TGIP+ +M Sbjct: 526 DAAR----AELKQLLDELRQRQGDA--------PMVPIQVDGHVVAEIVAAWTGIPLGKM 573 Query: 557 MQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGK 616 ++ E + +L ++ +L ERV+GQ +A AV+ +R SRA L DP KP G F+F+GP+GVGK Sbjct: 574 VKDEIQTVLDLDALLQERVLGQPQATSAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGK 633 Query: 617 TELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPY 676 TE ALA L+ E +I I+MSE+ E H+V+ L G+PPGYVGY EGG LTEAVRR PY Sbjct: 634 TETALALADVLYGGERKLITINMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPY 693 Query: 677 SVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKI------ 730 SV+LLDE+EKAH DV + QV D G M D +GR +DFKNT+I++TSN+ S ++ Sbjct: 694 SVVLLDEVEKAHADVLELFFQVFDKGVMDDAEGREIDFKNTIIILTSNVASAQMMQACLN 753 Query: 731 QSMED-SDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAKIQLRILEQR 789 +S E+ P + + ++ F+P F+ R+ ++V ++ + + I K++L + +R Sbjct: 754 KSQEELPTPEELDTLIRPQLIKTFKPAFLGRL-KVVPYYPIADVVLVEIIKLKLARIAKR 812 Query: 790 LAK 792 +A+ Sbjct: 813 VAE 815 >gi|300310731|ref|YP_003774823.1| ATP-dependent protease ATP-binding specificity subunit [Herbaspirillum seropedicae SmR1] Length = 767 Score = 308 bits (790), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 183/401 (45%), Positives = 252/401 (62%), Gaps = 21/401 (5%) Query: 26 NQYIEPVHLILALLNQDDGGARSLLQRAGVNVNGLISALQAALK-RLPQVSGNG---GEV 81 +++I HL+LALL D+ A +L+ VN++ L L + P V G + Sbjct: 22 HEFITVEHLLLALL--DNPSAAEVLRACSVNIDDLRKTLTNFITDNTPTVPGTNEVDTQP 79 Query: 82 QVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDK-SDAGRAARENGLTRKSLEAAI 140 +G + V + ++ +G + V VL+ + +K S A + G+TR + I Sbjct: 80 TLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSHAVYYLHQQGVTRLDVVNFI 139 Query: 141 T-AVRGGASVSSQ---------QDEGQRE--ALKKYTLDLTERARAGKLDPVIGRDDEIR 188 + VR Q Q EGQ++ L ++T +L + A GK+DP+IGR+ E+ Sbjct: 140 SHGVRKDQQADPQKAPEGAEDVQAEGQQKESPLDQFTQNLNKAAAEGKIDPLIGRESEVE 199 Query: 189 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAG 248 R IQ L RR KNNP+L+GE GVGKTAI EGLA R+ G+VP+ LK+ V SLDM ALLAG Sbjct: 200 RVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRVTQGDVPEILKNAVVYSLDMGALLAG 259 Query: 249 AKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEG-AMDAGNMLKPALARGE 307 KYRG+FE+RLKAVLK++ +D I+FIDE+HT++GAG A G +DA N+LKPAL+ G+ Sbjct: 260 TKYRGDFEQRLKAVLKQL-KDSPNGILFIDEIHTIIGAGSASGGTLDASNLLKPALSSGQ 318 Query: 308 LHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVDITD 367 L C+GATT E+R EKD AL RRFQKI V+EP+VE T+ ILRGL+ K+E HHGV + Sbjct: 319 LKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTVEQTVQILRGLKSKFEEHHGVKYSA 378 Query: 368 PAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSK 408 A+ +AAEL+ R+I DR LPDKAID+IDEA + +I SK Sbjct: 379 SALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSK 419 Score = 279 bits (714), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 225/352 (63%), Gaps = 21/352 (5%) Query: 510 EAALEVQNKKDAAGVVSEKPKLVRTQVGAEEIAEIVARATGIPVSRMMQGEREKLLHMED 569 + A++V ++ AA + K K +T +G EI EI+++ IP + Q +R KL ++ Sbjct: 399 DKAIDVIDEAGAAQRILPKSKQKKT-IGKPEIEEIISKIARIPPQSVNQDDRAKLQTIDR 457 Query: 570 VLHERVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCKALASYLFD 629 L V GQD AI A+S AI+ +RAGLG KP GSF+F GPTGVGKTE+ K LA ++ Sbjct: 458 DLKNVVFGQDPAIEALSSAIKMARAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLA-FILG 516 Query: 630 TEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHP 689 E ++R DMSE+ME+H+V+RLIGAPPGYVG+++GG LTEAV +KP++V+LLDEIEKAHP Sbjct: 517 IE--LVRFDMSEYMERHAVSRLIGAPPGYVGFDQGGLLTEAVNKKPHAVLLLDEIEKAHP 574 Query: 690 DVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQ--------SMEDSDPALV 741 D+FN+LLQV+D G +TD GR DF+N +I+MT+N G+ +Q E D Sbjct: 575 DIFNILLQVMDHGTLTDNNGRKTDFRNVIIIMTTNAGAESLQKRTIGFTEKKEAGDE--- 631 Query: 742 KLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAKIQLRILEQRLAKLEIGLQISE 801 MA+++ F PEF NR+D I+ F LD + I + L LE++L + ++ S+ Sbjct: 632 ----MADIKRMFTPEFRNRLDAIISFRPLDEEIILRVVDKFLMQLEEQLHEKKVEAVFSD 687 Query: 802 AGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAGKF--GPKDVVQVD 851 + + + + GFDP+ GARP+ R IQ I L+ ++L GK G + V++D Sbjct: 688 SLRKFLGKKGFDPLMGARPMSRLIQDLIRKALADELLFGKLVSGGRVTVEMD 739 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.315 0.134 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,435,054 Number of extensions: 101572 Number of successful extensions: 469 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 457 Number of HSP's successfully gapped: 5 Length of query: 861 Length of database: 1,619,870 Length adjustment: 93 Effective length of query: 768 Effective length of database: 1,179,515 Effective search space: 905867520 Effective search space used: 905867520 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 135 (56.6 bits)