BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1745.p
         (832 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311204|ref|YP_003775296.1| lysophospholipase L1 biosynthes...  1357   0.0  

>gi|300311204|ref|YP_003775296.1| lysophospholipase L1 biosynthesis
           ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
          Length = 832

 Score = 1357 bits (3513), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 756/831 (90%), Positives = 797/831 (95%)

Query: 1   MFQQALRMTLRDWRTGELRFLLIALVVAVAALSSVGFFVDRMRAGMTRDAHQLLGADLLI 60
           MFQQALRMT RDWRTGELRFLLIAL+VAVA+LSSVGFFVDRMRAGMTRDAHQLLGADLL+
Sbjct: 1   MFQQALRMTWRDWRTGELRFLLIALIVAVASLSSVGFFVDRMRAGMTRDAHQLLGADLLV 60

Query: 61  AADQPLPPTWLQQAAQAGLLQAQTQVFPSMAQAGEGDAARSVLASIKAVTAGYPLRGQLT 120
           AADQPLPP W+Q+AA  GL QAQTQVFPSMAQAGEGDAAR+VLASIKAVTAGYPLRGQL 
Sbjct: 61  AADQPLPPQWMQRAAAQGLQQAQTQVFPSMAQAGEGDAARAVLASIKAVTAGYPLRGQLR 120

Query: 121 LRADDGRDRPAQGIPQPGTVWVDPQILSQLDVKVGDTLKLGDLPVKIAALISVEPDRGSA 180
           L+   G DRPA+GIPQPGTVWVDPQILSQLDV+VGDTLKLGDLP+KIAA+I+VEPDRGSA
Sbjct: 121 LQTASGADRPAEGIPQPGTVWVDPQILSQLDVRVGDTLKLGDLPLKIAAVIAVEPDRGSA 180

Query: 181 FVNFAPRVMLGEADLAATHLVQVGSRVTYRLLIAGPAEAVQRYQQQIERQIEAEQLRGVR 240
           FVNFAPRVMLGEADLAATHLVQVGSRVTYRLL+AGPA  V+++QQ++ERQIEA++LRGVR
Sbjct: 181 FVNFAPRVMLGEADLAATHLVQVGSRVTYRLLLAGPAPVVKQFQQELERQIEADKLRGVR 240

Query: 241 LESLENGRPEMRATLDRAEQFLSLVGLLSAMLAALAVAMAARRFMLRHLDACAMLRCFGL 300
           LESLENGRPEMRATLDRAEQFLSLVGLLSAMLAALAVAMAARRFMLRHLDACAMLRCFGL
Sbjct: 241 LESLENGRPEMRATLDRAEQFLSLVGLLSAMLAALAVAMAARRFMLRHLDACAMLRCFGL 300

Query: 301 TQAQVTVLYLTEFILIGTVASVIGMLLGFAAHFALLQWLGGFMPTALPPPGWAPALQGVA 360
           TQAQVT LYL EF+L+G  ASV+GML+G+AAHFALLQWLG FMPTALPP GW PA+QGVA
Sbjct: 301 TQAQVTRLYLGEFMLVGLAASVLGMLIGYAAHFALLQWLGNFMPTALPPAGWQPAVQGVA 360

Query: 361 TGLLLLVGFALPPILQLRNVPHNRVIRRDQGAPQALTVASYLLGTLVFSGLLLWQAGDLK 420
            GLLLL+GFALPPILQLRNVPHNRVIRRDQ  PQ LTVA+Y LGTLVFSGLLLWQAGDLK
Sbjct: 361 AGLLLLLGFALPPILQLRNVPHNRVIRRDQLTPQPLTVATYGLGTLVFSGLLLWQAGDLK 420

Query: 421 LGLLTIAGFLGGFGLFALLAWLCLRALRALRGLVDRQSWRFAIDGLQRRPAAAVMQVVAL 480
           LGLLTIAGFLGGFGLFAL+AWLCLRALR+LRGLVDRQSWRFAIDGLQRRPAAAVMQVVAL
Sbjct: 421 LGLLTIAGFLGGFGLFALVAWLCLRALRSLRGLVDRQSWRFAIDGLQRRPAAAVMQVVAL 480

Query: 481 GLGLMALLLLTVIRGDLVGAWRQATPADAPNRFIINIQPDQRQAVQQALRQGGVQDVALY 540
           GLGLMALLLLTVIRGDLVGAWRQATPADAPNRFIINIQPDQRQAV+Q LRQGGV DVALY
Sbjct: 481 GLGLMALLLLTVIRGDLVGAWRQATPADAPNRFIINIQPDQRQAVEQLLRQGGVGDVALY 540

Query: 541 PMIRGRLVQINGRAITAADYQEDRAKRLVDREFNLSTMPDIPPGNGIVAGRWYDDSKPEA 600
           PMIRGRLVQINGRAI+AADY EDRAKRLVDREFNLST+ +IPPGNGIVAGRWYDD +PEA
Sbjct: 541 PMIRGRLVQINGRAISAADYAEDRAKRLVDREFNLSTLREIPPGNGIVAGRWYDDRQPEA 600

Query: 601 SVERGLAQTLGIKLGDRLQFDIAGQLVEAPVTSLRKLEWGSLRVNFFVILNPTLMRDTPQ 660
           SVERGLAQTLGIKLGDRLQFDIAGQLVEAPVTSLRKLEWGSLRVNFFVILNPTLMRDTPQ
Sbjct: 601 SVERGLAQTLGIKLGDRLQFDIAGQLVEAPVTSLRKLEWGSLRVNFFVILNPTLMRDTPQ 660

Query: 661 SWITAVHLTPAQEALGNTLTRDFPNLTVVDIGSVLRQIQEVVGQVIAAVEFLFLFTLCSG 720
           SWITAVHL P QEALGNTLTRD+PNLTVVDIGSVLRQIQ+VVGQVI+AVEFLFLFTLCSG
Sbjct: 661 SWITAVHLNPQQEALGNTLTRDYPNLTVVDIGSVLRQIQDVVGQVISAVEFLFLFTLCSG 720

Query: 721 VLVLYAALAGSQDERVREAGLLRALGATRQELSSAQRIEVLLVGSLAGLLAASGAAAIGW 780
           VLVLYAALAGSQDERVREAGLLRALGATR EL+ AQRIEVLLVG+LAGLLAASGAAAIGW
Sbjct: 721 VLVLYAALAGSQDERVREAGLLRALGATRVELARAQRIEVLLVGALAGLLAASGAAAIGW 780

Query: 781 ALAHYVFNFDWSFSPLVWVAGMGLGAACSALGGWAGLRHVLRRPPLQTLRE 831
           ALAHYVFNFDWSFSPLVW+AGM LGAACSALGGWAGLRHVLRRPPLQTLRE
Sbjct: 781 ALAHYVFNFDWSFSPLVWLAGMSLGAACSALGGWAGLRHVLRRPPLQTLRE 831


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.325    0.139    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 2,270,949
Number of extensions: 89230
Number of successful extensions: 436
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 435
Number of HSP's successfully gapped: 1
Length of query: 832
Length of database: 1,619,870
Length adjustment: 93
Effective length of query: 739
Effective length of database: 1,179,515
Effective search space: 871661585
Effective search space used: 871661585
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 135 (56.6 bits)