BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1665.p (2676 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311133|ref|YP_003775225.1| hemolysin-adenylate cyclase [He... 3339 0.0 >gi|300311133|ref|YP_003775225.1| hemolysin-adenylate cyclase [Herbaspirillum seropedicae SmR1] Length = 2656 Score = 3339 bits (8658), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1959/2706 (72%), Positives = 2190/2706 (80%), Gaps = 80/2706 (2%) Query: 1 MATASPSQANSADKVTGPVRVVMPDQAGSFQINANRAAVQHVQVVDVDLVLHMADGTKVV 60 MATAS SQ NS+DKVTGPVRVVMPDQ+GSFQINANR AVQHVQVVDVD+VLHMADG+KVV Sbjct: 1 MATASSSQVNSSDKVTGPVRVVMPDQSGSFQINANRGAVQHVQVVDVDMVLHMADGSKVV 60 Query: 61 LAGGAMEAMDDKSKVKFADTSAATGKLLDTVGKIALKPNDQSRVLNSDPVASAPNVA--- 117 LAGGAMEAMDDKSKVKFAD+S+ TGKLLD VGKI LKPNDQSR+LNSDP+A A NVA Sbjct: 61 LAGGAMEAMDDKSKVKFADSSSETGKLLDAVGKIPLKPNDQSRILNSDPIAVADNVASFD 120 Query: 118 ---PAQ-QVTIDRNSASVGSDGSTQFAQIISDNSASLTSTSGTGKTANSTGPLTAGDTSH 173 AQ VT+DRN+ASVGSDG +Q ++II+DN+ SLTS +G+ + T P T GD+S Sbjct: 121 AHAQAQPHVTVDRNAASVGSDGISQLSKIITDNAGSLTS-NGSQNLSVPTQP-TVGDSS- 177 Query: 174 PTTTTAAAAAASQSQPSSQSVFAQSTNPNANDAPIKQVEPQLPPERPGSIPTPQILPDPS 233 Q S + A + NP++NDAPI+ V+PQLPPE+PG+IP+ I+ DPS Sbjct: 178 --------------QVSVAASIAAALNPSSNDAPIRPVDPQLPPEKPGTIPST-IVVDPS 222 Query: 234 QPAMTVKLVNLTTITQSGDALFGSGGIPVSATDAGLPLQFSTQVINAGNDVHTIYAAGNN 293 QP+M +KLVNLTTITQ+GD+LFGSGGIPVSATDAGLPLQFSTQVINAGNDVHTIYAAGNN Sbjct: 223 QPSMAIKLVNLTTITQTGDSLFGSGGIPVSATDAGLPLQFSTQVINAGNDVHTIYAAGNN 282 Query: 294 AGTFIKVFDVNITGNGSVVSVIVSGVPSNMSIVNGTDLGGGRFQMTVAAGQTDFPLQLQY 353 AGTFIKVFDV I+GNG+V+SVIVSGVP+NMSIVN T+LGGGR+QM+VA+GQTDFP+QLQY Sbjct: 283 AGTFIKVFDVTISGNGNVLSVIVSGVPANMSIVNATNLGGGRYQMSVASGQTDFPMQLQY 342 Query: 354 STVEANPSSPVHQAFDLTFTTTVSTSRGPQTLTDVRHVAVKDASVYGDLSYLDPATGDPV 413 +TVEAN +SPVHQ FDLTFTT V+TS G TL DVRHVA+KDA+ YGDLSYLDPATGDPV Sbjct: 343 NTVEANTASPVHQHFDLTFTTVVATSLGQLTLNDVRHVALKDATAYGDLSYLDPATGDPV 402 Query: 414 LVLPAQGLPHEVHAGDGGVTIYGSNANDLLYGGAGNDILHGGTGNTFFQGGAGADQLLGG 473 LVLPAQGLPHEVHAG+GGVTIYGSNANDLLYGG GND ++GG+GNTFF GGAGAD+L+GG Sbjct: 403 LVLPAQGLPHEVHAGNGGVTIYGSNANDLLYGGTGNDTIYGGSGNTFFDGGAGADRLVGG 462 Query: 474 VNSTGTNVNTASYAGSSAGVTVNLVTGLGSGGDAQGDQLSNIQNLRGSAFDDTFVANAVV 533 VNSTGTNVNT SYA SSAGV VNLVTG+G+GGDAQGDQLSNIQNL+GSA+ DTFVANA V Sbjct: 463 VNSTGTNVNTVSYANSSAGVNVNLVTGVGTGGDAQGDQLSNIQNLKGSAYSDTFVANASV 522 Query: 534 NRLDGGSGGSDTVSYAGSTAAVTVNLVTGTGTGGYAQGDTYTHIQNVIGSDFNDIFVASG 593 NRLDGGSGGSDTVSY S AAVTVNLVTGTG+GG+AQGDTYTHIQNV+GS FNDIFVASG Sbjct: 523 NRLDGGSGGSDTVSYESSNAAVTVNLVTGTGSGGHAQGDTYTHIQNVVGSAFNDIFVASG 582 Query: 594 DANRFDGGLGSNTVSYVNSNAGVNVNLQSGVGSGGAAAGDTYVRIQNVIGTAYNDTFVGS 653 DANRFDGG GSNTVSYVNS GVNVNL +GVGSGGAA GDTYVRIQNVIGTA +DTFVG+ Sbjct: 583 DANRFDGGAGSNTVSYVNSAVGVNVNLLTGVGSGGAADGDTYVRIQNVIGTAGDDTFVGN 642 Query: 654 ADANSFDGGSGGSDTVSYAGSTAGVSINFVSGRGTGGYAEGDSYNHIQNAIGSAFDDVFI 713 ADANSFDGGSGG+DTVSYAGS GVS+NF+SGRGTGG AEGD+YNHIQNAIGSAFDDVF Sbjct: 643 ADANSFDGGSGGNDTVSYAGSAQGVSVNFISGRGTGGNAEGDTYNHIQNAIGSAFDDVFF 702 Query: 714 AGVDSVHFDGGSGGSDTVNYGASTGAVTVNMITMSGSGGYAQNNTYTNIQNIVGSSYSDT 773 AGVDS HFDGGSGGSDTVNYG STGAVTV+MI + GSGGYAQNN+YT+IQNIVGSSYSDT Sbjct: 703 AGVDSRHFDGGSGGSDTVNYGGSTGAVTVDMINLVGSGGYAQNNSYTHIQNIVGSSYSDT 762 Query: 774 FIASAAANNFNGGLGGSDTVSYANSNAAVTVDLTHTDGTGTSGGYAQGDVLAHIQNLIGS 833 FIAS AANNFNGGLGGSDTVSYA SNAAVTVDL H GTG SGGYAQGDVLAHIQN+IGS Sbjct: 763 FIASLAANNFNGGLGGSDTVSYAFSNAAVTVDLFH--GTG-SGGYAQGDVLAHIQNVIGS 819 Query: 834 AYNDTFIASADVNNFNGGGGSNTVSYIFSTGGVTVDLTNAIGTGTGGYYAAGDSFSNIQN 893 Y+DTFIASADVNNF+G GGSNTVSY +STGGVTVDLTN IGTGTGGYYAAGDSFSNIQN Sbjct: 820 NYDDTFIASADVNNFDGRGGSNTVSYFYSTGGVTVDLTNTIGTGTGGYYAAGDSFSNIQN 879 Query: 894 LIGSAYDDTFVASADANTFDGA-GSNHNRVSYAASTTAVTVDLNYTDGTGTSGGYAQGDK 952 LIGS YDDTFVASADAN+FDG GS HNRVSYAAST VTVDLNY++GTGTSGGYAQGDK Sbjct: 880 LIGSVYDDTFVASADANSFDGGTGSLHNRVSYAASTAGVTVDLNYSNGTGTSGGYAQGDK 939 Query: 953 LSNIQDLTGGSGNDTFVASAVANNFDGGAGSNRVSYAASNAAVTVDLVLGSGSGGYADND 1012 L+NIQDLTGG+GNDTFVAS NNFDGGAGSNRVSYAAS +AVTVDLVLG G+GGYA+ND Sbjct: 940 LANIQDLTGGAGNDTFVASLAENNFDGGAGSNRVSYAASTSAVTVDLVLGVGTGGYANND 999 Query: 1013 TYVNIQNVTGSAYDDTFIASLAANDFVGGAGTNTVSYAKASDGNGVTVDLYHGQGSAGFA 1072 TY NIQNVTGS +DDTFIASLAAN F GGAG NTVSYAKA DGNGVTVDL++G+GS GFA Sbjct: 1000 TYANIQNVTGSGFDDTFIASLAANAFDGGAGNNTVSYAKAGDGNGVTVDLFNGRGSNGFA 1059 Query: 1073 GGDTYSGIQNVIGSAYDDTFIADNNHNVLDGGLGSNTVSYAFSTAAVTVNLVNGTGTGGF 1132 GDTY+ IQNVIGSAYDDTF+ADNNHNV DG GSNTVSYA STAAVTVNLV GTGTGGF Sbjct: 1060 AGDTYANIQNVIGSAYDDTFVADNNHNVFDGRQGSNTVSYANSTAAVTVNLVTGTGTGGF 1119 Query: 1133 ADGDTYLNIQNVVGSALDDLIIASNQANSIDGGSSTASSHNRVSYASSNAAVTVDLNYTN 1192 ADGDT+ NIQNVVGSA DDLIIAS+ AN+IDGG S +HNRVSYA+S A VTVDL YT+ Sbjct: 1120 ADGDTFTNIQNVVGSAQDDLIIASSDANTIDGGLSATGAHNRVSYANSGAGVTVDLTYTD 1179 Query: 1193 GTGTSGGYAAGDKLANIQDLTGSIYDDTFVASAAANNFDGGTSTASSHNRVSYASSNAAV 1252 GTGTSGGYA GDKL+NIQDLTGS +DDTFVAS AANNFDGG T S HNRVSYA S+A+ Sbjct: 1180 GTGTSGGYATGDKLSNIQDLTGSQFDDTFVASLAANNFDGG--TGSLHNRVSYAHSSASE 1237 Query: 1253 TVDLNYTNGTGTSGGYAAGDTLTNIQDLTGSSFDDVFVASAAANNFDGGASTASSHNRVS 1312 T+DL +GTGT YA GD TNIQD+TG S DD+ +A+AAANN DGG S HNRVS Sbjct: 1238 TIDLFNGSGTGT---YAQGDRYTNIQDVTGGSADDLIIANAAANNIDGGG--GSLHNRVS 1292 Query: 1313 YASSNAGVTVDLNYTDGTGTSGGYAAGDTLTNIQDLTGSNYDDTFVASAVANHFDGGGG- 1371 Y +S TVDL G+G G A GDT NIQD+TG + DD FVASA AN FDGGGG Sbjct: 1293 YQNSTVSETVDLFNNVGSGGVGSLANGDTYANIQDVTGGSADDLFVASAAANAFDGGGGS 1352 Query: 1372 NNTVSYARANDGNGV-TVDLFQRVGSNGFAAGDQYTNIQNVIGSNYDDLFIADNNANSFA 1430 +N VSYA + V V G A GD Y NIQ+ G + +D F + AN F Sbjct: 1353 HNRVSYANSTVDETVNLVSGQGSGGIGSLANGDTYANIQDATGGSGNDTFYGNTAANRFD 1412 Query: 1431 GGAGS-NTVSYVNSTAAVTVNLANGSGSGG---FAQGDSYSSIQNVIGSSFDDTILASSD 1486 GG GS N V+Y ST A TV+L N GSGG A GD+Y++IQ+V G + DD +AS+ Sbjct: 1413 GGGGSHNRVNYSGSTVAETVDLFNNVGSGGAGSLANGDTYANIQDVTGGTADDVFIASAA 1472 Query: 1487 ANLIDGGSSTASSHNRVSYASSNAAVTVDLNYTDGTGTSGGYAAGDKLSNIQDLTGSSFD 1546 AN DGG S HNRVSYA+S+A TV+L G+G +G A GD NIQD+TG S + Sbjct: 1473 ANAFDGGG--GSLHNRVSYANSSADETVNLVTGQGSGGTGSLANGDTYINIQDVTGGSGN 1530 Query: 1547 DTFVASAAANNFDGGTSTASSHNRVSYASSNAAVTVDLNYTDGTGTSGGYAAGDTLTNIQ 1606 DTF + AANNFDGG T HNRV+Y+SS A T+DL G+G +G A GD TNIQ Sbjct: 1531 DTFYGNTAANNFDGGGGT---HNRVNYSSSTVAETIDLLNGQGSGGAGSLANGDRYTNIQ 1587 Query: 1607 DLTGSSFDDTFVASAAANRFDGGTSTSSSHNRVSYASSTAGVVVDLNSTDGTGTSGGYAA 1666 D TG S DD F+ASAAANRFDGG S HNRVSYASSTA +DL + G+G A Sbjct: 1588 DATGGSADDVFIASAAANRFDGG--GGSLHNRVSYASSTADETIDLYNGTGSGGLNSLAN 1645 Query: 1667 GDTLVNIQDLTGSNYDDTFVASAVANNFDGGGG-NNTVSYARANDGNGVTVDLF---QRV 1722 GDT NIQD+TG +DTFVA+ AN FDGGGG +N VSYA + TVDL Sbjct: 1646 GDTYANIQDVTGGAGNDTFVATVAANTFDGGGGTHNRVSYANSTVAE--TVDLIAGLGSG 1703 Query: 1723 GSNGFAAGDQYTNIQNVIGSNYDDLFIADNNANSFAGGTGS-NTVSYVNSTAAVTVNLAN 1781 G+ FAAGD YTNIQ+V G + +D FIA AN F GG GS N VSY +ST + TV+L N Sbjct: 1704 GAGSFAAGDVYTNIQDVTGGSANDTFIASAAANRFDGGGGSHNRVSYASSTVSETVDLFN 1763 Query: 1782 GSGSGG---FAQGDSYSSIQNVIGSAFDDTILASSDANVIDGGSSTSSSHNRVSYASSNA 1838 G+G+GG A GD+Y++IQ+V G DD +AS+ AN DGG T HNRVSYA+SNA Sbjct: 1764 GNGTGGAGSLANGDTYTNIQDVTGGTADDVFIASAAANAFDGGGGT---HNRVSYANSNA 1820 Query: 1839 AVTVDLNYTDGTGTSGGYAAGDKLSNIQDLTGSSFDDTFVASAAANNFDGGTSTASSHNR 1898 A T++L G+GT AAGD NIQD+TG +DTF + AAN FDGG T HNR Sbjct: 1821 AETINLVSGQGSGT---LAAGDTYLNIQDVTGGGGNDTFYGNTAANTFDGGGGT---HNR 1874 Query: 1899 VSYASSNAAVTVDLNYTDGTGTSGGYAAGDTLTNIQDLTGSSYDDTFVASAAANRFDGGA 1958 VSYA+S A TVDL G+G +G A GDT TNIQD TG S +DTFVASAAAN FDGG Sbjct: 1875 VSYATSTVAETVDLFLGQGSGGAGSLANGDTYTNIQDATGGSANDTFVASAAANAFDGGG 1934 Query: 1959 STSSSHNRVSYASSNAAVTVDLNYTNGTGTSGGYAAGDTLINIQDLTGSNYDDTFVASAA 2018 SHNRVSYA+S T++L GTG +G A GDT NIQD+TG + +DT VASAA Sbjct: 1935 ---GSHNRVSYANSTVDETINLVSNTGTGGAGSLANGDTYANIQDVTGGSGNDTIVASAA 1991 Query: 2019 ANFLEGGGGSNTVSYARSTSSNNSTGVTVDLSAGSGSGNYAQGDSYSNIQNVIGSDWADT 2078 ANFL+GG GSNTVSYA STSSN STGVTVDLSAG+GSGNYAQGD+Y+NIQNVIGSD+ADT Sbjct: 1992 ANFLDGGTGSNTVSYAGSTSSNGSTGVTVDLSAGTGSGNYAQGDTYANIQNVIGSDFADT 2051 Query: 2079 LTGFATPGVTSVLTGGKGADNLIANAANRADTYASYAGSSAGVTINLQAGSGSGGDAQGD 2138 LTGFAT GVTSVLTGGKGAD L A ANRA TYASYAGS+ GV+INLQ G GS GDAQGD Sbjct: 2052 LTGFATVGVTSVLTGGKGADKLTAIDANRAYTYASYAGSANGVSINLQTGVGSNGDAQGD 2111 Query: 2139 VLTNIDNVIGSSNNDTFLASANANKFNGEAGSDTVNYSLSSSADGTNGVTVDLSAGSGSG 2198 L NIDN+IGSS NDTF ASANANK +G AGSDTVNYSLS+S+DG NGVTVDLSAGSGSG Sbjct: 2112 TLFNIDNLIGSSQNDTFYASANANKLDGGAGSDTVNYSLSTSSDGVNGVTVDLSAGSGSG 2171 Query: 2199 NYAQGDTYINIENVVGSAYNDTITGFATTGTRSVLEGGAGADTITAVNGNRASTFASYAG 2258 NYA GDTY NIEN VGSAY D +TGFAT G RSVLEGGAGAD ITAV NRA+T+ASYAG Sbjct: 2172 NYADGDTYTNIENAVGSAYQDRLTGFATVGVRSVLEGGAGADVITAVAANRANTYASYAG 2231 Query: 2259 SGSAVTIDLKNGSGSGGDAQGDVLVNIDNVIGSAYNDLFKASTQANNFNGGSGGVDTVSY 2318 S SAVT+DLKN +GSGGDAQGD LVNIDNVIGSAY+D F ASTQANNF+GGSGG DTVSY Sbjct: 2232 SSSAVTVDLKNATGSGGDAQGDTLVNIDNVIGSAYSDTFVASTQANNFDGGSGGSDTVSY 2291 Query: 2319 EYDTGGVTVDLTNTLAATGTYAAGDTFTNIANLTGGSGNDTFYASSVANSFDGGGGTNTV 2378 DTGGVTVDLTNTLAA+G YA GD FTNIANL GGSGNDTFYASS AN+F+GG G NTV Sbjct: 2292 ANDTGGVTVDLTNTLAASGAYAVGDKFTNIANLIGGSGNDTFYASSAANAFEGGAGVNTV 2351 Query: 2379 NYARSGSTPVVVDLYHGSGSG------GYAAGDTYANIQNVTGSAGSDTFYANSATNVFN 2432 NYARSGS VVVDL+HG+GS YAAGDTY++IQNV GSAG+DTFYA+ N F Sbjct: 2352 NYARSGSAGVVVDLFHGTGSAPSGVANSYAAGDTYSHIQNVVGSAGNDTFYASGDANAFT 2411 Query: 2433 GGAGGSDTVSYLYSTGNDITASLVSG--GSGGDASGDSYVGISNLEGSANVNSTLTGNSG 2490 GG GGSDTVSY YST DIT SL +G GSGGDASGD+Y GI+NLEGSANVNS+LTGN+ Sbjct: 2412 GG-GGSDTVSYYYSTSGDITVSLATGSVGSGGDASGDTYSGIANLEGSANVNSSLTGNAS 2470 Query: 2491 ANVLTARGNNTTNSLSGGGASSGTDVFNVVEGGHNSVSVGSGSNLINVSAGANSSAGAQS 2550 AN LTARG++TTNSLSGGGASSGTD++NVVEGGHN+V+VGSG+NLINVSAG++SS GAQS Sbjct: 2471 ANTLTARGDSTTNSLSGGGASSGTDIYNVVEGGHNTVTVGSGNNLINVSAGSHSSLGAQS 2530 Query: 2551 DMVNQNTGNANIDSINGGAGVTTLHFADLGSQLQLSNFASKITGITTLDVSAGNSTNIII 2610 DMVNQNTG +NI+SI+GGAGVTTLHFADLG+ L LSNF+SK++GITTLDVSAG STNI+I Sbjct: 2531 DMVNQNTGQSNINSISGGAGVTTLHFADLGNSLNLSNFSSKVSGITTLDVSAGGSTNILI 2590 Query: 2611 TADDVRQMGMAGSGSSKILTVKMSTSESLQIMANGSDHYVYFPGTTDYAFYNSSNQEIAR 2670 TA DV +MGM +S ILTVKMS ESLQI ANGSDHYVYFPGTTDYAFYNSSN E+AR Sbjct: 2591 TAQDVIRMGMPSGSTSTILTVKMSAGESLQIAANGSDHYVYFPGTTDYAFYNSSNTEVAR 2650 Query: 2671 IHLVTA 2676 IHLVTA Sbjct: 2651 IHLVTA 2656 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.307 0.126 0.347 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 7,875,912 Number of extensions: 352218 Number of successful extensions: 2784 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 1352 Number of HSP's successfully gapped: 10 Length of query: 2676 Length of database: 1,619,870 Length adjustment: 102 Effective length of query: 2574 Effective length of database: 1,136,900 Effective search space: 2926380600 Effective search space used: 2926380600 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 139 (58.2 bits)