BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1585.p
         (174 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311056|ref|YP_003775148.1| carbonic anhydrase/acetyltransf...   337   3e-94
gi|300313410|ref|YP_003777502.1| carbonic anhydrase/acetyltransf...   112   1e-26
gi|300312547|ref|YP_003776639.1| isoleucine patch superfamily ca...    75   3e-15

>gi|300311056|ref|YP_003775148.1| carbonic
           anhydrase/acetyltransferase [Herbaspirillum seropedicae
           SmR1]
          Length = 174

 Score =  337 bits (865), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 162/174 (93%), Positives = 171/174 (98%)

Query: 1   MAIYQLEQHIPDIDDTAFVAESATVVGKVRMEAHSSVWFNVTLRGDNELITVGENSNVQE 60
           MAIYQLEQ IP+I DTAFVAES+TVVGKV+MEAHSSVWFNV +RGDNELIT+GENSNVQE
Sbjct: 1   MAIYQLEQDIPEIHDTAFVAESSTVVGKVKMEAHSSVWFNVAIRGDNELITIGENSNVQE 60

Query: 61  GAVLHTDVGYPMVIGKNVTVGHQAMLHGCTIGDGALIGIQAVVLNGARIGKNCLVGAGAL 120
           GAVLHTDVGYPMVIGKNVTVGHQAMLHGCTIG+GALIGIQAVVLNGA+IGKNCLVGAGAL
Sbjct: 61  GAVLHTDVGYPMVIGKNVTVGHQAMLHGCTIGEGALIGIQAVVLNGAKIGKNCLVGAGAL 120

Query: 121 VTEGKEFPDNSLIIGAPAKAVRQLSEEDIARMQAGTDSYVQRAQQFKAQLKRIA 174
           VTEGKEFPDNSLIIGAPAKAVRQLSEEDIARM+AGTDSYVQRAQQFKA+LKRIA
Sbjct: 121 VTEGKEFPDNSLIIGAPAKAVRQLSEEDIARMRAGTDSYVQRAQQFKAKLKRIA 174


>gi|300313410|ref|YP_003777502.1| carbonic
           anhydrase/acetyltransferase [Herbaspirillum seropedicae
           SmR1]
          Length = 200

 Score =  112 bits (281), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 99/174 (56%)

Query: 1   MAIYQLEQHIPDIDDTAFVAESATVVGKVRMEAHSSVWFNVTLRGDNELITVGENSNVQE 60
           M  Y +E  IP +D +A+V  +A ++G V +     V     LRGD   I +   +NVQ+
Sbjct: 1   MPCYSIEGVIPVVDPSAYVHPTAVLIGDVIVGPDCYVGPTACLRGDFGRIVLQRGANVQD 60

Query: 61  GAVLHTDVGYPMVIGKNVTVGHQAMLHGCTIGDGALIGIQAVVLNGARIGKNCLVGAGAL 120
             V+H   G+  V+ +N  +GH A+LH CT+   AL+G+ AVV++ A +G+  +V A A 
Sbjct: 61  TCVIHGFPGHDTVVEENGHIGHGAVLHSCTVRRDALVGMNAVVMDEAVVGEQAIVAACAF 120

Query: 121 VTEGKEFPDNSLIIGAPAKAVRQLSEEDIARMQAGTDSYVQRAQQFKAQLKRIA 174
           V  G + P  +L  G PAK VR+L+ +++A  QAGT +Y     +  A L+ ++
Sbjct: 121 VRAGMQIPPRTLAAGLPAKVVRELTADEMAWKQAGTRTYQDLTVRCLASLREVS 174


>gi|300312547|ref|YP_003776639.1| isoleucine patch superfamily
           carbonic anhydrase/acetyltransferase [Herbaspirillum
           seropedicae SmR1]
          Length = 186

 Score = 75.1 bits (183), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 10/128 (7%)

Query: 9   HIPDIDDTAFVAESATVVGKVRMEAHSSVWFNVTLRGDN-------ELITVGENSNVQEG 61
           H P + ++A+V  +A + GKV +  +  +     +R D        E I +G +SN+Q+G
Sbjct: 9   HRPQVHESAYVDHTAILCGKVIVHENVFIGPYAVIRADEVDEHGEMEPIIIGAHSNIQDG 68

Query: 62  AVLHTDVGYPMVIGKNVTVGHQAMLHG-CTIGDGALIGIQAVVLNGARIGKNCLVGAGAL 120
            V+H+  G  + IG+  ++ H+A++HG CT+GD A IG  +V+ N   IG  C+V   A+
Sbjct: 69  VVIHSKSGAAVTIGERTSIAHRAIVHGPCTVGDDAFIGFNSVLFN-CSIGAGCVVRHNAV 127

Query: 121 VTEGKEFP 128
           V +G + P
Sbjct: 128 V-DGCDLP 134


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.134    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 541,138
Number of extensions: 23003
Number of successful extensions: 116
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 111
Number of HSP's successfully gapped: 3
Length of query: 174
Length of database: 1,619,870
Length adjustment: 79
Effective length of query: 95
Effective length of database: 1,245,805
Effective search space: 118351475
Effective search space used: 118351475
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 127 (53.5 bits)