BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1368.p (705 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore rece... 1207 0.0 gi|300310281|ref|YP_003774373.1| TonB-dependent siderophore rece... 588 e-169 gi|300310824|ref|YP_003774916.1| hydroxamate-type ferrisideropho... 254 2e-68 gi|300311660|ref|YP_003775752.1| TonB-dependent receptor protein... 252 9e-68 gi|300309529|ref|YP_003773621.1| TonB dependent ferrisiderophore... 237 2e-63 >gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 1207 bits (3124), Expect = 0.0, Method: Compositional matrix adjust. Identities = 574/705 (81%), Positives = 635/705 (90%) Query: 1 MNMTALRAAVLGALAMAQGLPPAWSADATAGSDSGLGQIVVTGTGERQQYRQSSTSSATR 60 M MTALRAAVLGALA+ Q +W+ADA + LG+IVVTG GERQQYRQSSTSSATR Sbjct: 1 MKMTALRAAVLGALALGQTPSVSWAADAAGKQEGDLGEIVVTGQGERQQYRQSSTSSATR 60 Query: 61 TETPLQELPQSVQVVSRQLIDDLGAQRLDDVLLYVSGVAKQNNFGGLWDNYSIRGFSGSD 120 TETPLQELPQSVQVVSRQLIDDL A RLDDVLLYVSGVA+QNNFGGLWDNYSIRGFSGS+ Sbjct: 61 TETPLQELPQSVQVVSRQLIDDLAATRLDDVLLYVSGVARQNNFGGLWDNYSIRGFSGSE 120 Query: 121 NGGMNILWNGFASNRGYAPPRDLANVESVDFLKGPAAALYGNSEPGGTINVVSKKPQFKR 180 NGGMNILWNGFASNRGYAPPRD+ANVESVDFLKGPAAALYGNSEPGGTINVV+KKPQFK Sbjct: 121 NGGMNILWNGFASNRGYAPPRDMANVESVDFLKGPAAALYGNSEPGGTINVVTKKPQFKS 180 Query: 181 ANALDLSIGSNDSYRSSIDSTGALNSELAYRLNAAVERRGSWRDDIHSQREFFAPALTWV 240 ANALDLSIGSND+YRS++DSTGAL+S +AYRLNAA+E +GS RD + S+REFFAPA TW+ Sbjct: 181 ANALDLSIGSNDAYRSAVDSTGALSSTVAYRLNAAMEHKGSMRDQVRSEREFFAPAFTWL 240 Query: 241 LSDSTVLNYEAEFLRQKVPFDRGIVAVNGNLGVLPISRFLGEPGDGDVKMDNQNHLLTLE 300 L+++T+LNYE EFLRQK P DRGIVAVNGN GVLP+SRFLGEP DGD+KM NQNHLLTLE Sbjct: 241 LTENTILNYEGEFLRQKAPLDRGIVAVNGNAGVLPVSRFLGEPNDGDIKMQNQNHLLTLE 300 Query: 301 HRLNDNWHLRTGLFHKEGTLQGYSTEASALQADNATLRRQRRYRDYGWHDSSLQFELGGK 360 RLN+NWHLRTG+FHKEG+L GYSTEA ALQADNATLRRQRRYRDY WHD+SLQ E+GGK Sbjct: 301 QRLNENWHLRTGIFHKEGSLDGYSTEAFALQADNATLRRQRRYRDYSWHDTSLQAEIGGK 360 Query: 361 LTTGSVGHEVLVGTELDWMTLDQRMLRVNPTTAAPYAINIYNPVYGQPLPTPRANTDTSE 420 T VGHEVLVGTE+DW+TLDQRMLR+NP+ APYA+NIYNPVYGQ PTP ANTDTSE Sbjct: 361 FATAGVGHEVLVGTEVDWLTLDQRMLRINPSNVAPYAVNIYNPVYGQAQPTPTANTDTSE 420 Query: 421 RQSSSAFYLQDQISLTQRWKLLAGIRADAFSSTLNNWRTSTITRQDKNAYSPRLGLTYLF 480 RQ S+ YLQDQ+SL++RW+LLAG+RADAF STLNN R +TRQDK+AYSPRLGLTYL Sbjct: 421 RQISTGLYLQDQLSLSERWRLLAGVRADAFRSTLNNLRNGAVTRQDKHAYSPRLGLTYLL 480 Query: 481 TPSWSAYASASKSFRPNSGSDIHGRAFSPETSGAAEVGLKFQSADQRSGATLAVFDITKQ 540 TPSWS Y SASKSFRPNSGSD+ G AFSPETS AAE GLKFQS D+RSGATLAVFDITKQ Sbjct: 481 TPSWSVYVSASKSFRPNSGSDVSGNAFSPETSRAAEAGLKFQSEDKRSGATLAVFDITKQ 540 Query: 541 NVLTADPSNPAFSIAAGEVRSKGVELDANAKLGHHWRLTGNLAYTDAYVSKDNTLAVGSR 600 NVLT DP+NP FSIAAGEVRSKGVELDANA+LGHHWR+TGNLAYTDAYVS+DNTL VGSR Sbjct: 541 NVLTTDPANPNFSIAAGEVRSKGVELDANARLGHHWRVTGNLAYTDAYVSRDNTLPVGSR 600 Query: 601 LLNVPRVSGSVLAVFEDALASGSPYGIGGGLNYVGDRTGDQTGSFKLPAYLTARALAYWQ 660 L+N+PR S S+LAVFEDA A G+PYG+GGGLNYVG RTGDQ GSF LP+Y+TARALAYWQ Sbjct: 601 LVNIPRSSASLLAVFEDADAHGAPYGVGGGLNYVGRRTGDQAGSFMLPSYVTARALAYWQ 660 Query: 661 LTPKMKLSLDVDNLFNKRYYSSSYSSVWIMPGNERTATLALNVKF 705 TPKMKLSLDV+NLFNKRYYSSSY+S+WIMPG+ER ATLALN+KF Sbjct: 661 FTPKMKLSLDVNNLFNKRYYSSSYNSLWIMPGDERNATLALNIKF 705 >gi|300310281|ref|YP_003774373.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 715 Score = 588 bits (1516), Expect = e-169, Method: Compositional matrix adjust. Identities = 327/681 (48%), Positives = 447/681 (65%), Gaps = 15/681 (2%) Query: 31 GSDSGLGQIVVTGTGERQQYRQSSTSSATRTETPLQELPQSVQVVSRQLIDDLGAQRLDD 90 G+ + L +I V+ E+ Y STS ATRT+TPL ELPQSV+V++ Q IDDLGA RL D Sbjct: 44 GTAAALPEISVSAGREKNSYNAPSTSGATRTDTPLLELPQSVRVMTTQQIDDLGAVRLAD 103 Query: 91 VLLYVSGVAKQNNFGGLWDNYSIRGFSGSDNGGMNILWNGFASNRGYAPPRDLANVESVD 150 + YVSG+++ N+FGG WDN++IRGFS +D M L NGF +RGY P RD A +E ++ Sbjct: 104 TVDYVSGISRLNDFGGTWDNFAIRGFSSTD---MGFLVNGFPGSRGYNPRRDTATIERIE 160 Query: 151 FLKGPAAALYGNSEPGGTINVVSKKPQFKRANALDLSIGSNDSYRSSIDSTGALNSELAY 210 FLKGPA+ALYG+SEPGGTIN+V+KKPQF +N+ ++S G+ R+++DSTG L+ LAY Sbjct: 161 FLKGPASALYGSSEPGGTINIVTKKPQFSASNSAEVSAGTGGLRRATVDSTGPLSQNLAY 220 Query: 211 RLNAAVERRGSWRDDIHSQREFFAPALTWVLSDSTVLNYEAEFLRQKVPFDRGIVAVNGN 270 RL A E S + ++R AP+L WV+ +T+LNYE EFL+ P DRGI+ V G Sbjct: 221 RLIAMTEEGDSRSSLLSNRRSLVAPSLAWVIDKNTLLNYEGEFLQASTPLDRGIINVRGV 280 Query: 271 LGVLPISRFLGEPGDGDVKMDNQNHLLTLEHRLNDNWHLRTGLFHKEGTLQGYSTEA--- 327 LG LP R L EP DG++ M + H LTLEH L++ W +R G +KE + GY TEA Sbjct: 281 LGGLPRDRVLSEPSDGNMAMRSNTHQLTLEHSLSEQWRMRLGASYKESSFDGYYTEAKLR 340 Query: 328 SALQADNATLRRQRRYRDYGWHDSSLQFELGGKLTTGSVGHEVLVGTELDWMTLDQRMLR 387 + LQAD TL R +R D S+Q EL G+ TG + H LVG E + ++ +LR Sbjct: 341 NPLQADLRTLDRTGTWRQLPSRDMSIQGELHGQFKTGDIAHTFLVGAEASKLWMNTEILR 400 Query: 388 VNPTTAAPYAINIYNPVYGQPLPTPRANTDTS-ERQSSSAFYLQDQISLTQRWKLLAGIR 446 TT P I+IYNP+YG P T +S E Q A ++QDQ+SL+ +WKLL G+R Sbjct: 401 --STTLLP--IDIYNPIYGAARPALDDRTSSSDENQRVKALFVQDQLSLSPQWKLLGGLR 456 Query: 447 ADAFSSTLNNWRTSTI--TRQDKNAYSPRLGLTYLFTPSWSAYASASKSFRPNSGSDIHG 504 D ++ ++ + R + + T Q ++A SPR G++YL S Y SA KSFR NSG D++G Sbjct: 457 WDQYNQSVVS-RVAPVGTTSQRQSAVSPRAGISYLPNAWSSVYLSAGKSFRGNSGVDVNG 515 Query: 505 RAFSPETSGAAEVGLKFQSADQRSGATLAVFDITKQNVLTADPSNPAFSIAAGEVRSKGV 564 R F P+ S + E GLK QS D+R GA AV+DITK NVLT NP F AAGEV+S G Sbjct: 516 RPFDPQRSTSYEAGLKLQSTDERLGANFAVYDITKTNVLTTS-DNPNFMAAAGEVKSTGF 574 Query: 565 ELDANAKLGHHWRLTGNLAYTDAYVSKDNTLAVGSRLLNVPRVSGSVLAVFEDALASGSP 624 E DA +L +WRL+ N ++ DA VSKD TL G+RL N+P S +L + EDALA+G+ Sbjct: 575 EADAYGQLNANWRLSANFSWDDARVSKDRTLPTGTRLANIPAYSAGLLVMREDALANGAR 634 Query: 625 YGIGGGLNYVGDRTGDQTGSFKLPAYLTARALAYWQLTPKMKLSLDVDNLFNKRYYSSSY 684 YG+GGG+NYVG+R+G+ ++ LPAY + L+YWQ++ ++LSLDV NLFN+ YY S+ Sbjct: 635 YGVGGGVNYVGNRSGNAADTYSLPAYTLVKLLSYWQVSKNVRLSLDVHNLFNRNYYPGSW 694 Query: 685 SSVWIMPGNERTATLALNVKF 705 +++++MPG ERT + + Sbjct: 695 NNLYVMPGAERTVVARMKIDL 715 >gi|300310824|ref|YP_003774916.1| hydroxamate-type ferrisiderophore receptor signal peptide protein, tonB-dependent receptor [Herbaspirillum seropedicae SmR1] Length = 715 Score = 254 bits (648), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 212/712 (29%), Positives = 343/712 (48%), Gaps = 44/712 (6%) Query: 15 AMAQGLPPAWSADATAGSDSGLGQIVVTGTGERQQYRQSSTSSATRTETPLQELPQSVQV 74 +AQ PP + ++ + + L + VT G +++ + ++ TPL E PQS+ V Sbjct: 27 VLAQTAPPQGADSSSTAASAALPTVSVTADGYTDSKFKATQTQVNKSSTPLSETPQSISV 86 Query: 75 VSRQLIDDLGAQRLDDVLLYVSGVAKQNNFGGLWDNYSIRGFSGSDNGGMNILWNGFASN 134 V+R ++D A L D L VSGV Q WD+ IRG SD+ + +G + Sbjct: 87 VTRAMMDSQQAVSLSDALKNVSGVVAQQYGRRGWDDLIIRGQVASDS----LYLDGLRTT 142 Query: 135 RGYAPPRDLANVESVDFLKGPAAALYGNSEPGGTINVVSKKPQFKRANALDLSIGSNDSY 194 L ++ V+ LKGP + LYG PGG +N+VSK+PQ +D++IGS+D Y Sbjct: 143 ASSRVAEQLYGLQQVEVLKGPGSLLYGLVLPGGLVNMVSKRPQGSDFANVDVTIGSHDLY 202 Query: 195 RSSIDSTGAL--NSELAYRLNAAVERRGSWRDDIHSQREFFAPALTWVL---SDSTVLN- 248 +S++D +L N + A+R+N + D + + + AP+L+ L +D T+L Sbjct: 203 QSTVDLNKSLSENGKQAFRINGLISNSDDATDHVWFKNRYIAPSLSLDLGARTDFTILTS 262 Query: 249 -YEAEFLRQK-VPFDRGIVAVNGNLGVLPISRFLGEPGDGDVKMDNQNHLLTLEHRLNDN 306 E ++RQ+ +P G + N + G L S F+GEPG + +L HR +D Sbjct: 263 YQERNYVRQQGLPLS-GSITPNAS-GPLARSLFIGEPGARPYAANETRIGYSLTHRFDDG 320 Query: 307 WHLRTGLFHKEGTLQGYSTEASALQADNATLRRQRRYRDYGWHDSSLQFELGGKLTTGSV 366 W L L +++ T+ G + L +L R + + ++ + T Sbjct: 321 WTLNNNLRYQQFTMSGQLISINNLTG--TSLTRSAMDQTFEGQTFTMDTNVQRSFATAWG 378 Query: 367 GHEVLVGTELDWMTLDQRMLRVNPTTAAPYAINIYNPVYGQPLPTPRANTDTSERQSSSA 426 HEV +GT D+M + R L T + NIYNP YG + P T T+ + + ++ Sbjct: 379 KHEVTLGT--DYM--NSRELERTLTCSVTPLSNIYNPSYGARVVCPTQLTSTNAKLNDTS 434 Query: 427 -----FYLQDQISLTQRWKLLAGIRADAFSSTLNNWRTSTIT-RQDKNAYSPRLGLTYLF 480 FY +D+ISL +RW+LLAG+R D ++ + TS +T NA S + Sbjct: 435 VRDTGFYARDKISLGERWQLLAGVRQDRAAT----YTTSALTGSHSDNASSATTASAAIM 490 Query: 481 TPSWSA---YASASKSFRPNSGSDIHGRAFSPETSGAAEVGLKFQSADQRSGATLAVFDI 537 W Y S + SF PNSG+ G F PET E G+K + R+ A+FD+ Sbjct: 491 VELWHGVRPYLSYATSFYPNSGTAFDGSIFKPETGKQWETGVKVDLDEGRTSINFALFDL 550 Query: 538 TKQNVLTADPSNPAFSIAAGEVRSKGVELDANAKLGHHWRLTGNLAYTDAYVSKD---NT 594 ++NVL DP + ++ +A G RS+G E+ + L + L +YT A V D + Sbjct: 551 RRRNVLVTDPDHTSYKMAIGGQRSQGGEISVTSDLRNGLSLNAAYSYTAAIVIDDGGQRS 610 Query: 595 LAVGSRLLNVPRVSGSVLAVFEDALASGSPYGIGGGLNYVGDRTGDQTGSFKLPAYLTAR 654 VG L NVPR + + A + + S + + GG V ++ +T + LP Y+ A Sbjct: 611 TTVGQWLDNVPRHNFTTSARYRFS-GELSGWELNGG---VRGQSMMRTNGYTLPGYVLAD 666 Query: 655 -ALAYWQLTPKMKLSLDVDNLFNKRYYSSSYSSVWIMPGNERTATLALNVKF 705 +AY + + +L+V N+FN YY+ + G++RT L L ++ Sbjct: 667 IGVAY--NAERWRTALNVKNVFNTEYYAGGLGKA-VALGDDRTVMLTLGYRY 715 >gi|300311660|ref|YP_003775752.1| TonB-dependent receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 252 bits (643), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 209/690 (30%), Positives = 330/690 (47%), Gaps = 62/690 (8%) Query: 42 TGTGERQQYRQSSTSSATRTETPLQELPQSVQVVSRQLIDDLGAQRLDDVLLYVSGVAKQ 101 T G Y T+SAT+T+TP+ E+PQSV VV+R +D G L DVL Y+ G + Sbjct: 42 TANGPVNGYVAKRTASATKTDTPVLEVPQSVSVVTRDEMDARGVTSLLDVLRYMPGANSE 101 Query: 102 NNFGGL----WDNYSIRGFSGSDN-----GGMNILWNGFASNRGYAPPRDLANVESVDFL 152 + G+ ++ +++RGF + G+ + GF R + +E ++ L Sbjct: 102 TH--GVDPRGYEYFNLRGFINAQVTSNFLNGLRQIPGGFGQFR-----TETYGMERIEVL 154 Query: 153 KGPAAALYGNSEPGGTINVVSKKPQFKRANALDLSIGSNDSYRSSIDSTG---------- 202 +GP + +G ++PGG IN VSK P N L + IGS + + D G Sbjct: 155 RGPGSVTFGQADPGGVINRVSKLPGMDIPNELGVDIGSFNRKQVVADLNGHTQDGEYLWR 214 Query: 203 ----ALNSELAYRLNAAVERRGSWRDDIHSQREFFAPALTWVLSDSTVLNYEAEFLRQKV 258 L+S Y+ N G D+ R + AP+LTW S ST L A+++ + Sbjct: 215 VVGLGLDSNNQYKFN-----NGQSGDN---NRFYLAPSLTWRPSASTSLTLMADYMNDRS 266 Query: 259 PFDRGIVAVNGNLGVLPISRFLGEPGDGDVKMDNQNHLLTLEHRLNDNWHLRTGLFHKEG 318 R GN+ +G+P D + EH+ ++ W R ++ Sbjct: 267 GSSRWTAVRPGNV---LTHTLIGDPNFDRQSNDQWSFGYQFEHKFDNAWTFRQNF--RQA 321 Query: 319 TLQGYSTEASALQADNATLRRQRRYRDYGWHDSSLQFELGGKLTTGSVGHEVLVGTELDW 378 L+ + + L R + ++ + +L G+L G+ H VL G LDW Sbjct: 322 NLKSVYAALNPGTLTGSVLTRGTTVYNSQVDNTLVDNQLEGRLKWGATEHTVLFG--LDW 379 Query: 379 MTLDQRMLRVNPTTAAPYAINIYNPVYGQPLPTPRANT---DTSERQSSSAFYLQDQISL 435 + R +R AAP ++NI NPVYG +P A T + E + + Y QDQI Sbjct: 380 SRMYDREVRYR--GAAP-SLNIDNPVYGVTIPA--ATTLFGNLEENMNQTGLYAQDQIKF 434 Query: 436 TQRWKLLAGIRADAFSSTLNNWRTSTITRQDKNAYSPRLGLTYLFTPSWSAYASASKSFR 495 QR L G R D N+ T TR D +A S R+GL+YL T + Y S + SF Sbjct: 435 DQRLTLTLGGRWDKVKDETRNYFNRTTTRSDDSALSGRIGLSYLVTRDIAPYVSYATSFL 494 Query: 496 PNSGSDIHGRAFSPETSGAAEVGLKFQSADQRSGATLAVFDITKQNVLTADPSNPAFSIA 555 P +GSD +G+ F P + AEVG+K+Q AD ++ T A+F++TK NV T DP++ F++ Sbjct: 495 PQTGSDFNGKPFDPTKARQAEVGIKYQPADGKTLFTAALFELTKTNVQTPDPAHTNFNVL 554 Query: 556 AGEVRSKGVELDANAKLGHHWRLTGNLAYTDAYVSKDNTLA-VGSRLLNVPRVSGSVLAV 614 +GE++S+G+EL+A ++ L+ + YTD +++NT + +G + + VPR + SV A Sbjct: 555 SGEIKSRGLELEAKGEIVKGLNLSASYTYTDVKNTQNNTASLLGKQPILVPRQAASVWAD 614 Query: 615 FEDALASGSPYGIGGGLNYVGDRTGDQTGSFKLPAYLTARALAYWQLTPKMKLSLDVDNL 674 + + GIGGG Y G D + K A+ ++ L + + +L++ N+ Sbjct: 615 YTVQGGPLAGAGIGGGARYTGSNYADAANTVKNGGVTVFDAVFHYNLN-RWRYALNISNI 673 Query: 675 FNKRYYSS----SYSSVWIMPGNERTATLA 700 NK Y S + + W ERTA L+ Sbjct: 674 TNKEYTSCLAEPTTTCFWAA---ERTAILS 700 >gi|300309529|ref|YP_003773621.1| TonB dependent ferrisiderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 704 Score = 237 bits (605), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 234/731 (32%), Positives = 346/731 (47%), Gaps = 67/731 (9%) Query: 3 MTALRAAVLGALAMA--QGLPPAWSADATAGSDSGLGQIVVTGTGERQQYRQSSTSSATR 60 ++ LR AVL +++ LP D TA L I V+G Y + S T+ Sbjct: 5 LSPLRLAVLATCSLSPLAILPACAQQDTTA-----LPAIEVSGARANDGYVAPTAVSGTK 59 Query: 61 TETPLQELPQSVQVVSRQLIDDLGAQRLDDVLLYVSGVAKQNNFGGLWDNYSIRGFSGSD 120 +E PL+++PQ++ VV Q+I D A L DVL V G+ G D IRGF+ Sbjct: 60 SEAPLRDVPQTINVVPAQVIRDQNASSLQDVLKNVPGLGLSTG-DGQRDQVFIRGFTAIG 118 Query: 121 NGGMNILWNGFASNRGYAPPRDLANVESVDFLKGPAAALYGNSEPGGTINVVSKKPQFKR 180 + +GF + Y RDL+NVESV+ +KGPAA LYG GG IN V+KKP Sbjct: 119 DQ----FVDGFRDDALYF--RDLSNVESVEVIKGPAAVLYGRGSSGGLINRVTKKPG--- 169 Query: 181 ANALDLSIGSNDS--YRSSIDSTGALNSELAYRLNAAVERRGSWRDDIHSQREFFAPALT 238 + D+S +N + R+ +D A L++RL AVER S+R R AP++ Sbjct: 170 VDVSDVSFTANSTAGRRAELDLGRAGEGALSWRLTGAVERGDSFRAQQFIDRTAIAPSVA 229 Query: 239 WVLSDSTVLNYEAEFLRQKVPFDRGIVAVNGN-LGVLPISRFLGEPG-DGD-VKMDNQNH 295 S T L + ++L + D GI + G + V P + + D D V+ + Sbjct: 230 LRFSADTKLLLQMDYLEDRRMMDFGIPSYRGRPVDVDPGTTYGARNARDADFVQSRVAST 289 Query: 296 LLTLEHRLNDNWHLRTGL------FHKEGTLQGYSTEASALQADNATLRRQRRYRDY-GW 348 T HR ND + R GL ++ T G EA+A TL + RD GW Sbjct: 290 TATFTHRFNDEFSFRNGLRYYDYHLNRNNTNGGTVNEATA----TTTLNHAKLVRDENGW 345 Query: 349 HDSSLQFELGGKLTTGSVGHEVLVGTELDWMTLDQRMLRVNPTTAAPYAINIYNPVYGQP 408 + S EL KL GS+ HE+L G EL + D + + P ++I+NPV P Sbjct: 346 FNQS---ELTQKLQLGSIRHEILYGLELGSQSKDAS--QASGVVNFP-GVSIFNPVL--P 397 Query: 409 LPTP-RANTDTSERQSSSAF--YLQDQISLTQRWKLLAGIRADAF---SSTLN--NWRTS 460 + P R N T + F YLQD +SL+++WK L G+R D + S LN N T+ Sbjct: 398 VVDPNRLNPPTLTYGTYDTFATYLQDSLSLSEQWKALVGLRYDRYRQQSRILNLANGSTA 457 Query: 461 TITRQDKNAYSPRLGLTYLFTPSWSAYASASKSFRPNSGS---DIHGRAFSPETSGAAEV 517 + R D A SPR GL + + + S Y S S+SF+P+ S + +PE + E Sbjct: 458 DLQRTD-TAVSPRAGLVWQPSLTQSYYLSWSRSFQPSGESFALATNNADLAPEQTRNTEA 516 Query: 518 GLKFQSADQRSGATLAVFDITKQNVLTADPSNPAFSIAAGEVRSKGVELDANAKLGHHWR 577 G K+ + R+ AT++VF + + N+ +A P+ I G+ R+ G EL +A L W+ Sbjct: 517 GAKYDFWEGRASATVSVFRLERDNIKSALPN--GVVIPVGKQRTDGAELSFSADLKQGWK 574 Query: 578 LTGNLAYTDAYVSK----DNTLAV-GSRLLNVPRVSGSVLAVFEDALASGSPYGIGGGLN 632 L A+ +A +++ DN + G PR SG++ E G N Sbjct: 575 LLAGYAWLNAVITESSSFDNGVPFKGKNATLTPRHSGNLWLTRELGEGLVVGGGA----N 630 Query: 633 YVGDRTGDQTGSFKLPAYLTARALAYWQLTPKMKLSLDVDNLFNKRYYSSSYSS--VWIM 690 VG R + + LP Y+T A+A ++ T K ++ L++ NLFN Y S + + M Sbjct: 631 AVGARFANPGNTVTLPGYVTVDAMAAYR-TSKYEVQLNIGNLFNTGYIISGHGTNPNLSM 689 Query: 691 PGNERTATLAL 701 PG R L L Sbjct: 690 PGAPRNVALTL 700 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.315 0.131 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,277,995 Number of extensions: 99908 Number of successful extensions: 421 Number of sequences better than 1.0e-08: 18 Number of HSP's gapped: 345 Number of HSP's successfully gapped: 19 Length of query: 705 Length of database: 1,619,870 Length adjustment: 92 Effective length of query: 613 Effective length of database: 1,184,250 Effective search space: 725945250 Effective search space used: 725945250 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 134 (56.2 bits)