BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1246.p (720 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310762|ref|YP_003774854.1| outer membrane ferric sideropho... 951 0.0 gi|300309529|ref|YP_003773621.1| TonB dependent ferrisiderophore... 273 3e-74 gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore rece... 234 2e-62 gi|300312681|ref|YP_003776773.1| TonB-dependent siderophore rece... 186 4e-48 gi|300310281|ref|YP_003774373.1| TonB-dependent siderophore rece... 186 8e-48 >gi|300310762|ref|YP_003774854.1| outer membrane ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 717 Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/711 (65%), Positives = 550/711 (77%), Gaps = 7/711 (0%) Query: 12 VLRTLPAALMAALCTLPVQAAE--GGAEREDNPAPRLPAVEVRGQRNHADPRPGPLGSAT 69 +R LPA L A LP AAE GG E E + LP VEVR QR DPR +G+AT Sbjct: 12 CVRRLPATLCLAFLALPAYAAERDGGNEGEPSGESSLPVVEVRDQRRSPDPRARRVGTAT 71 Query: 70 RTATDPREVPQTLQAVEVEQVKAYGGRGLAAALAGVPGISNVSDTRFDAFRIRGFSNAGD 129 R+A DP EVPQ++Q+V VEQV YG R LA AL GVPGIS++SDTRFDAFRIRGFS+A D Sbjct: 72 RSAADPMEVPQSIQSVSVEQVSVYGARTLAGALLGVPGISSISDTRFDAFRIRGFSSAND 131 Query: 130 TLLDGIRDDAQYVRSLGNIERIEILKGPAAVLYGRGSGGGVINRISKEPGREAFSQASLT 189 LLDG+RDD QYVR LGNIER+E+L+GPA+VLYGRGSGGGVINRISK+PG++ SQA+L+ Sbjct: 132 LLLDGMRDDPQYVRGLGNIERVEVLRGPASVLYGRGSGGGVINRISKQPGQDVASQATLS 191 Query: 190 WGSYGLQGAAIDWNRPLGEQWALRINAGREHEANFRNEVRGTRQYFAPTLKWESGRDSWL 249 GS GL GAA+DWNRPL WALRIN GREH +FR+ V GTRQYFAP LKWESGRDSWL Sbjct: 192 LGSAGLLGAALDWNRPLAPHWALRINTGREHAGSFRDTVNGTRQYFAPALKWESGRDSWL 251 Query: 250 LQANYDEFERTPDRGVPAQVTALTRNATASAYALPVASDHSFFGAAGRDFIRDSSLSLRS 309 LQA YDE+ER PDRG+P + A T N +AYALP A FFGAAGRD IRD +SLRS Sbjct: 252 LQAEYDEYERVPDRGIPGRAIA-TANGEPTAYALPSAGHEQFFGAAGRDVIRDIHMSLRS 310 Query: 310 TITRAIAADWSVRQVVSVFDLNSDFDNTFVSQPFVTAGRNLRGVQRSRFLQNLQHRNVQA 369 T+TRA++ DW++R +++ DLNS+FDNTFV+Q + +A +L VQR+R+ QNLQ R+VQ Sbjct: 311 TLTRALSQDWTLRHALALMDLNSNFDNTFVTQAYQSAPLDLDRVQRTRYQQNLQQRSVQN 370 Query: 370 NLEVLGTLAAGGMQHQLLAGAEYGWQKREPRLWMGSAIPVSLINPDNRNHIGSMPEPWQM 429 NLE+LG L A H LL G E+ WQKREPRLW +A VS + P+N + P+QM Sbjct: 371 NLELLGQLGA----HDLLLGVEHSWQKREPRLWSVAAPAVSAVTPENTRNGDDPTTPFQM 426 Query: 430 NYHKVNTTGLYAQDQIELGTHWKVLAGLRWDHFEVDSRSRLRKLRSERSTNALSPRIGAV 489 NYHK + GLY QD+I L HWK+LAGLRWD FEVDSR+R +RSER+ +ALSPRIG V Sbjct: 427 NYHKASNLGLYVQDKITLAAHWKMLAGLRWDRFEVDSRNRRNGVRSERTAHALSPRIGVV 486 Query: 490 WEALPDQHVYASWSKNYAPVGGDVIGITPGASGNANDLGPQFSRQLEVGVKSDWFQRRIS 549 WEALP QH Y SWSKN+APVGGDVIGITP A GN NDL PQFSRQ+E G+KS+W RR+S Sbjct: 487 WEALPGQHAYLSWSKNFAPVGGDVIGITPDARGNFNDLKPQFSRQVEAGIKSEWLDRRLS 546 Query: 550 TTLAWFQLELYNRTVADPVQPGVFSQTGQERNRGIELSVAGELASHWFLRGGWTHQNARV 609 TTLAWFQLEL+NR VADPV+PG F Q+G ERNRGIELSV GELA+ WF+R GW Q+A++ Sbjct: 547 TTLAWFQLELFNRNVADPVRPGFFEQSGLERNRGIELSVEGELAAPWFVRAGWAIQSAKI 606 Query: 610 LQAEAQFTGKRPSGVSARNGSLFVSYAPPQGWFGETGVVVEGARFADRDNLLELPGYARW 669 +QAE +F GKR SGVS R GSLF+SYAP GWF E G+ VEGAR+ADRDNLLELP Y RW Sbjct: 607 VQAEPKFVGKRASGVSGRGGSLFLSYAPTLGWFAELGLTVEGARYADRDNLLELPAYTRW 666 Query: 670 DALLGYRLERAEFTLAATNLTNRRYYASATGVSQIVPGAPRALVFTAAYKF 720 D +GYRL+ AEFTLA TNL NRRYY SATG+SQ+ PGAPRAL+ TAAYKF Sbjct: 667 DGKMGYRLDEAEFTLAVTNLANRRYYESATGLSQVRPGAPRALLLTAAYKF 717 >gi|300309529|ref|YP_003773621.1| TonB dependent ferrisiderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 704 Score = 273 bits (699), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 227/722 (31%), Positives = 335/722 (46%), Gaps = 55/722 (7%) Query: 23 ALCTLPVQAAEGGAEREDNPAPRLPAVEVRGQRNHADPRPGPLG-SATRTATDPREVPQT 81 A C+L A ++D A LPA+EV G R + D P S T++ R+VPQT Sbjct: 14 ATCSLSPLAILPACAQQDTTA--LPAIEVSGARAN-DGYVAPTAVSGTKSEAPLRDVPQT 70 Query: 82 LQAVEVEQVKAYGGRGLAAALAGVPGIS-NVSDTRFDAFRIRGFSNAGDTLLDGIRDDAQ 140 + V + ++ L L VPG+ + D + D IRGF+ GD +DG RDDA Sbjct: 71 INVVPAQVIRDQNASSLQDVLKNVPGLGLSTGDGQRDQVFIRGFTAIGDQFVDGFRDDAL 130 Query: 141 YVRSLGNIERIEILKGPAAVLYGRGSGGGVINRISKEPGREAFSQASLTWGSYGLQGAAI 200 Y R L N+E +E++KGPAAVLYGRGS GG+INR++K+PG + S S T S + A + Sbjct: 131 YFRDLSNVESVEVIKGPAAVLYGRGSSGGLINRVTKKPGVDV-SDVSFTANSTAGRRAEL 189 Query: 201 DWNRPLGEQWALRINAGREHEANFRNEVRGTRQYFAPTLKWESGRDS-WLLQANYDEFER 259 D R + R+ E +FR + R AP++ D+ LLQ +Y E R Sbjct: 190 DLGRAGEGALSWRLTGAVERGDSFRAQQFIDRTAIAPSVALRFSADTKLLLQMDYLEDRR 249 Query: 260 TPDRGVPAQVTALTRNATASAYALPVASDHSFFGAAGRDFIRDSSLSLRSTITRAIAADW 319 D G+P+ + Y A D DF++ S +T T ++ Sbjct: 250 MMDFGIPSYRGRPVDVDPGTTYGARNARDA--------DFVQSRVASTTATFTHRFNDEF 301 Query: 320 SVRQVVSVFDLNSDFDNT---FVSQPFVTAGRNLRGVQRSR---FLQNLQHRNVQANLEV 373 S R + +D + + +NT V++ T N + R F Q+ E+ Sbjct: 302 SFRNGLRYYDYHLNRNNTNGGTVNEATATTTLNHAKLVRDENGWFNQS----------EL 351 Query: 374 LGTLAAGGMQHQLLAGAEYGWQKREPRLWMGSA-IP-VSLINPDNRNHIGSMPEPWQMNY 431 L G ++H++L G E G Q ++ G P VS+ NP + P + Y Sbjct: 352 TQKLQLGSIRHEILYGLELGSQSKDASQASGVVNFPGVSIFNPVLPVVDPNRLNPPTLTY 411 Query: 432 HKVNTTGLYAQDQIELGTHWKVLAGLRWDHFEVDSRSRLRKLRS------ERSTNALSPR 485 +T Y QD + L WK L GLR+D + +SR+ L + +R+ A+SPR Sbjct: 412 GTYDTFATYLQDSLSLSEQWKALVGLRYDRYR--QQSRILNLANGSTADLQRTDTAVSPR 469 Query: 486 IGAVWEALPDQHVYASWSKNYAPVGGDVIGITPGASGNANDLGPQFSRQLEVGVKSDWFQ 545 G VW+ Q Y SWS+++ P G T N DL P+ +R E G K D+++ Sbjct: 470 AGLVWQPSLTQSYYLSWSRSFQPSGESFALAT-----NNADLAPEQTRNTEAGAKYDFWE 524 Query: 546 RRISTTLAWFQLELYNRTVADPVQPGVFSQTGQERNRGIELSVAGELASHWFLRGGWTHQ 605 R S T++ F+LE N A P GV G++R G ELS + +L W L G+ Sbjct: 525 GRASATVSVFRLERDNIKSALP--NGVVIPVGKQRTDGAELSFSADLKQGWKLLAGYAWL 582 Query: 606 NARVLQAEA-----QFTGKRPSGVSARNGSLFVSYAPPQGWFGETGVVVEGARFADRDNL 660 NA + ++ + F GK + +G+L+++ +G G GARFA+ N Sbjct: 583 NAVITESSSFDNGVPFKGKNATLTPRHSGNLWLTRELGEGLVVGGGANAVGARFANPGNT 642 Query: 661 LELPGYARWDALLGYRLERAEFTLAATNLTNRRYYASATGVSQ--IVPGAPRALVFTAAY 718 + LPGY DA+ YR + E L NL N Y S G + +PGAPR + T Y Sbjct: 643 VTLPGYVTVDAMAAYRTSKYEVQLNIGNLFNTGYIISGHGTNPNLSMPGAPRNVALTLRY 702 Query: 719 KF 720 Sbjct: 703 HM 704 >gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 234 bits (596), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 210/735 (28%), Positives = 323/735 (43%), Gaps = 59/735 (8%) Query: 13 LRTLPAALMAALCTLPVQAAEGGAEREDNPAPRLPAVEVRGQRNHADPRPGPLGSATRTA 72 + L AA++ AL + A+ L + V GQ R SATRT Sbjct: 3 MTALRAAVLGALALGQTPSVSWAADAAGKQEGDLGEIVVTGQGERQQYRQSSTSSATRTE 62 Query: 73 TDPREVPQTLQAVEVEQVKAYGGRGLAAALAGVPGIS--NVSDTRFDAFRIRGFS---NA 127 T +E+PQ++Q V + + L L V G++ N +D + IRGFS N Sbjct: 63 TPLQELPQSVQVVSRQLIDDLAATRLDDVLLYVSGVARQNNFGGLWDNYSIRGFSGSENG 122 Query: 128 GDTLL-DGIRDDAQYV--RSLGNIERIEILKGPAAVLYGRGSGGGVINRISKEPGREAFS 184 G +L +G + Y R + N+E ++ LKGPAA LYG GG IN ++K+P ++ + Sbjct: 123 GMNILWNGFASNRGYAPPRDMANVESVDFLKGPAAALYGNSEPGGTINVVTKKPQFKSAN 182 Query: 185 QASLTWGSYGLQGAAIDWNRPLGEQWALRINAGREHEANFRNEVRGTRQYFAPTLKWESG 244 L+ GS +A+D L A R+NA EH+ + R++VR R++FAP W Sbjct: 183 ALDLSIGSNDAYRSAVDSTGALSSTVAYRLNAAMEHKGSMRDQVRSEREFFAPAFTWLLT 242 Query: 245 RDSWLLQANYD-EFERTP---DRGVPAQVTALTRNATASAYALPVASDHSFFGAAGRDFI 300 ++ L NY+ EF R DRG+ A +A LPV+ F G I Sbjct: 243 ENTIL---NYEGEFLRQKAPLDRGIVA--------VNGNAGVLPVS---RFLGEPNDGDI 288 Query: 301 RDSSLSLRSTITRAIAADWSVRQVVSVFDLNSDFDNTFVSQPFVTAGRNLRGVQRSRFLQ 360 + + + T+ + + +W +R +F D + ++ F N ++R R + Sbjct: 289 KMQNQNHLLTLEQRLNENWHLR--TGIFHKEGSLDG-YSTEAFALQADNAT-LRRQRRYR 344 Query: 361 NLQHRNVQANLEVLGTLAAGGMQHQLLAGAEYGWQKREPRLWM--GSAIPVSLINPDNRN 418 + + E+ G A G+ H++L G E W + R+ S + +N N Sbjct: 345 DYSWHDTSLQAEIGGKFATAGVGHEVLVGTEVDWLTLDQRMLRINPSNVAPYAVNIYNPV 404 Query: 419 HIGSMPEPWQM--NYHKVNTTGLYAQDQIELGTHWKVLAGLRWDHFEVDSRSRLRKLR-- 474 + + P P + +TGLY QDQ+ L W++LAG+R D F RS L LR Sbjct: 405 YGQAQPTPTANTDTSERQISTGLYLQDQLSLSERWRLLAGVRADAF----RSTLNNLRNG 460 Query: 475 --SERSTNALSPRIGAVWEALPDQHVYASWSKNYAPVGGDVIGITPGASGNANDLGPQFS 532 + + +A SPR+G + P VY S SK++ P G + SGNA P+ S Sbjct: 461 AVTRQDKHAYSPRLGLTYLLTPSWSVYVSASKSFRPNSGSDV------SGNA--FSPETS 512 Query: 533 RQLEVGVKSDWFQRRISTTLAWFQLELYNRTVADPVQPGVFSQTGQERNRGIELSVAGEL 592 R E G+K +R TLA F + N DP P G+ R++G+EL L Sbjct: 513 RAAEAGLKFQSEDKRSGATLAVFDITKQNVLTTDPANPNFSIAAGEVRSKGVELDANARL 572 Query: 593 ASHWFLRGGWTHQNARVLQAEAQFTGKRPSGVSARNGSLFV------SYAPPQGWFGETG 646 HW + G + +A V + G R + + SL ++ P G G G Sbjct: 573 GHHWRVTGNLAYTDAYVSRDNTLPVGSRLVNIPRSSASLLAVFEDADAHGAPYGVGG--G 630 Query: 647 VVVEGARFADRDNLLELPGYARWDALLGYRLE-RAEFTLAATNLTNRRYYASATGVSQIV 705 + G R D+ LP Y AL ++ + + +L NL N+RYY+S+ I+ Sbjct: 631 LNYVGRRTGDQAGSFMLPSYVTARALAYWQFTPKMKLSLDVNNLFNKRYYSSSYNSLWIM 690 Query: 706 PGAPRALVFTAAYKF 720 PG R KF Sbjct: 691 PGDERNATLALNIKF 705 >gi|300312681|ref|YP_003776773.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 738 Score = 186 bits (473), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 194/728 (26%), Positives = 310/728 (42%), Gaps = 82/728 (11%) Query: 45 RLPAVEVRGQRNHADPRPGPLGSATRTATDPREVPQTLQAVEVEQVKAYGGRGLAAALAG 104 +L V V+GQR+ L T+ D R+VPQ++ V Q+++ G L+ AL Sbjct: 41 QLAPVTVQGQRDDFASTGTAL---TKLPADLRDVPQSVTVVNKAQMQSQGASSLSDALRN 97 Query: 105 VPGIS---NVSDTRFDAFRIRGFSNAGDTLLDGIRDDAQYVRSLGNIERIEILKGPAAVL 161 V GI+ + + GFS D LDG RD QY R I+ +E+L GP+++L Sbjct: 98 VSGITLGGAEGGQIGNNINLNGFSARTDIYLDGFRDRGQYYRDTFAIDEVEVLMGPSSML 157 Query: 162 YGRGSGGGVINRISKEPGREAFSQASLTWGSYGLQGAAIDWNRPLGEQWALRINAGREHE 221 +GRGS GG+IN++SK+ +A ++ S + + GL + +D NRPL + ALRI A ++ Sbjct: 158 FGRGSTGGIINQVSKKANLKAATEISGSITTNGLVRSTVDVNRPLSDTSALRIEAMAQNG 217 Query: 222 ANFRNEVRGTRQY-FAPTLKWESGRD-----SWLLQANYDEFERTPDRGVPAQVTALTRN 275 A + + + A + W G S LLQ N D+ PD G+P Sbjct: 218 AASTRKQTDVQDFGLAGSYVWGIGTPTEITLSALLQHNQDQ----PDYGLPPLNGHPANV 273 Query: 276 ATASAYALPVASDHSFFGAAGRDFIRDSSLSLRSTITRAIAADWSVRQVVSVFDLNSDFD 335 +AY L SD + I+D + S + IA D ++R +++D Sbjct: 274 GRDTAYGL--NSDRT---------IQDVA-SFNVGVKHKIAPDVTLRNQTQFNYVHTDAV 321 Query: 336 NT------FVS----QPFVTAGRNL-------RGVQRSRFLQNLQHRNVQANLEVLGTLA 378 T VS V A NL RG R + + N E+ A Sbjct: 322 ETAPNTIGTVSGAGFTQLVNASSNLPLSSLFVRGQSHDRVITDYSIFN---QTELTAKFA 378 Query: 379 AGGMQHQLLAGAEYGWQKREPRLWM--GSAIPVSL-INPDNRNHIGSMP--EPWQMNYH- 432 G ++H + G E G + + + GS +L N ++ +P P Sbjct: 379 TGSIKHDAVVGVEVGHDGYDNQNYYRNGSCNGTALNANGATTGYVDCVPLLNPSYSAAGS 438 Query: 433 ------------KVNTTGLYAQDQIELGTHWKVLAGLRWDHFEVDSRSRLRKLRS----E 476 NT Y D +EL +K++ GLR+D + + + R+ Sbjct: 439 SVSSSTGNRAGGSANTVAAYVGDTVELVPQFKLVGGLRYDRYIASITNSIASARTPAAAS 498 Query: 477 RSTNALSPRIGAVWEALPDQHVYASWSKNYAPVGGDVIGITPGASGNANDLGPQFSRQLE 536 ++ N LS R GA+W+ Q Y S+ ++ P + G G N L P+ +R E Sbjct: 499 QTINFLSLRSGAIWQPTSAQAYYVSYGTSFNP----SLEQLTGTQGQQN-LDPEKNRSYE 553 Query: 537 VGVKSDWFQRRISTTLAWFQLELYNRTVADPVQPGVFSQTGQERNRGIELSVAGELASHW 596 +G K D ++ T A FQ+ N V GV++ G+ R G G + W Sbjct: 554 LGGKWD-LADGLALTAAAFQITKDN--ARSQVATGVYALAGKVRVNGARAGATGHITREW 610 Query: 597 FLRGGWTHQNARVLQAEA--QFTGKRPSGVSARNGSLFVSYAPPQGWFGETGVVVEGARF 654 + +T+ A+VL+ A GK P + + +Y W G R+ Sbjct: 611 QVAANYTYLGAKVLEGAAGDNSVGKVPVNTPKHTLTTWTTYDLAPHWQIGGGASYMSQRY 670 Query: 655 ADRDNLLELPGYARWDALLGYRLERAEFTLAATNLTNRRYYAS--ATGVSQIVPGAPRAL 712 AD N +++ GY R+DA+L Y + + L NL+N+ YY + + + VPG+ R Sbjct: 671 ADAPNTVQVGGYTRYDAMLAYTTKAYDIRLNLYNLSNKMYYDALIQSDGGRSVPGSGRTA 730 Query: 713 VFTAAYKF 720 + + Y+ Sbjct: 731 LLSLTYRM 738 >gi|300310281|ref|YP_003774373.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 715 Score = 186 bits (471), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 192/709 (27%), Positives = 305/709 (43%), Gaps = 74/709 (10%) Query: 38 REDNPAPRLPAVEVRGQRNHADPRPGPLGSATRTATDPREVPQTLQAVEVEQVKAYGGRG 97 +E A LP + V R ATRT T E+PQ+++ + +Q+ G Sbjct: 41 QEGGTAAALPEISVSAGREKNSYNAPSTSGATRTDTPLLELPQSVRVMTTQQIDDLGAVR 100 Query: 98 LAAALAGVPGISNVSDT--RFDAFRIRGFSNAG-DTLLDGIRDDAQYV--RSLGNIERIE 152 LA + V GIS ++D +D F IRGFS+ L++G Y R IERIE Sbjct: 101 LADTVDYVSGISRLNDFGGTWDNFAIRGFSSTDMGFLVNGFPGSRGYNPRRDTATIERIE 160 Query: 153 ILKGPAAVLYGRGSGGGVINRISKEPGREAFSQASLTWGSYGLQGAAIDWNRPLGEQWAL 212 LKGPA+ LYG GG IN ++K+P A + A ++ G+ GL+ A +D PL + A Sbjct: 161 FLKGPASALYGSSEPGGTINIVTKKPQFSASNSAEVSAGTGGLRRATVDSTGPLSQNLAY 220 Query: 213 RINAGREHEANFRNEVRGTRQYFAPTLKWESGRDSWLLQANYD-EFER--TP-DRGVPAQ 268 R+ A E + + + R AP+L W +++ L NY+ EF + TP DRG Sbjct: 221 RLIAMTEEGDSRSSLLSNRRSLVAPSLAWVIDKNTLL---NYEGEFLQASTPLDRG---- 273 Query: 269 VTALTRNATASAYALPVASDHSFFGAAGRDFI----RDSSLSLRS-----TITRAIAADW 319 + + G RD + D ++++RS T+ +++ W Sbjct: 274 ----------------IINVRGVLGGLPRDRVLSEPSDGNMAMRSNTHQLTLEHSLSEQW 317 Query: 320 SVRQVVSVFDLNSDFDNTFVSQPFVTAGR-NLRGVQRSRFLQNLQHRNVQANLEVLGTLA 378 +R S + S FD + + +LR + R+ + L R++ E+ G Sbjct: 318 RMRLGASYKE--SSFDGYYTEAKLRNPLQADLRTLDRTGTWRQLPSRDMSIQGELHGQFK 375 Query: 379 AGGMQHQLLAGAEYGWQKREPRLWMGSAI-------PVSLINPDNRNHIGSMPEPWQMNY 431 G + H L GAE +LWM + I P+ + NP ++ + + Sbjct: 376 TGDIAHTFLVGAE------ASKLWMNTEILRSTTLLPIDIYNPIYGAARPALDDRTSSSD 429 Query: 432 HKVNTTGLYAQDQIELGTHWKVLAGLRWDHFEVDSRSRLRKL-RSERSTNALSPRIGAVW 490 L+ QDQ+ L WK+L GLRWD + SR+ + + + +A+SPR G + Sbjct: 430 ENQRVKALFVQDQLSLSPQWKLLGGLRWDQYNQSVVSRVAPVGTTSQRQSAVSPRAGISY 489 Query: 491 EALPDQHVYASWSKNYAPVGGDVIGITPGASGNANDLGPQFSRQLEVGVKSDWFQRRIST 550 LP+ +WS Y G G G N PQ S E G+K R+ Sbjct: 490 --LPN-----AWSSVYLSAGKSFRG-NSGVDVNGRPFDPQRSTSYEAGLKLQSTDERLGA 541 Query: 551 TLAWFQLELYN-RTVADPVQPGVFSQTGQERNRGIELSVAGELASHWFLRGGWTHQNARV 609 A + + N T +D P + G+ ++ G E G+L ++W L ++ +ARV Sbjct: 542 NFAVYDITKTNVLTTSD--NPNFMAAAGEVKSTGFEADAYGQLNANWRLSANFSWDDARV 599 Query: 610 LQAEAQFTGKRPSGVSARNGSLFV----SYAPPQGWFGETGVVVEGARFADRDNLLELPG 665 + TG R + + A + L V + A + GV G R + + LP Sbjct: 600 SKDRTLPTGTRLANIPAYSAGLLVMREDALANGARYGVGGGVNYVGNRSGNAADTYSLPA 659 Query: 666 YARWDALLGYRLER-AEFTLAATNLTNRRYYASATGVSQIVPGAPRALV 713 Y L +++ + +L NL NR YY + ++PGA R +V Sbjct: 660 YTLVKLLSYWQVSKNVRLSLDVHNLFNRNYYPGSWNNLYVMPGAERTVV 708 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.318 0.133 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,397,389 Number of extensions: 105545 Number of successful extensions: 414 Number of sequences better than 1.0e-08: 21 Number of HSP's gapped: 348 Number of HSP's successfully gapped: 27 Length of query: 720 Length of database: 1,619,870 Length adjustment: 92 Effective length of query: 628 Effective length of database: 1,184,250 Effective search space: 743709000 Effective search space used: 743709000 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 134 (56.2 bits)