BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1202.p (640 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310722|ref|YP_003774814.1| ABC transporter ATPase [Herbasp... 1195 0.0 gi|300313989|ref|YP_003778081.1| ABC transporter ATPase [Herbasp... 352 5e-98 gi|300311473|ref|YP_003775565.1| ABC transporter ATPase [Herbasp... 255 9e-69 gi|300311530|ref|YP_003775622.1| ABC transporter ATPase [Herbasp... 247 3e-66 gi|300311157|ref|YP_003775249.1| multidrug ABC transporter ATPas... 88 2e-18 >gi|300310722|ref|YP_003774814.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 640 Score = 1195 bits (3092), Expect = 0.0, Method: Compositional matrix adjust. Identities = 625/640 (97%), Positives = 631/640 (98%) Query: 1 MAVISLTDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLL 60 MAVISL+DAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLL Sbjct: 1 MAVISLSDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLL 60 Query: 61 VMQQGLKIAYVDQEPHFPAEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERM 120 VMQQ LKIAYVDQEPHFP EMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERM Sbjct: 61 VMQQNLKIAYVDQEPHFPEEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERM 120 Query: 121 HQIQTVLDAADAWSIGNKVETTLDKLNLNREARIGELSGGMKKRVALACGLVGNPDVLLL 180 HQIQTVLDAADAWSIGNKVETTLDKLNLNR+ARIGELSGGMKKRVALACGLVGNPDVLLL Sbjct: 121 HQIQTVLDAADAWSIGNKVETTLDKLNLNRDARIGELSGGMKKRVALACGLVGNPDVLLL 180 Query: 181 DEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFTT 240 DEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFTT Sbjct: 181 DEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFTT 240 Query: 241 YQTRKAELLANEEVENAKFDKFLAQEEVWIRKGVQARRTRDEGRVRRLEALRVQRSERRE 300 YQTRKAELLANEEVENAKFDKFLAQEEVWIRKGVQARRTRDEGRVRRLEALRVQRSERRE Sbjct: 241 YQTRKAELLANEEVENAKFDKFLAQEEVWIRKGVQARRTRDEGRVRRLEALRVQRSERRE 300 Query: 301 RQGQVKLEVGTGERSGKIVAELENVNKAYGPKTIVRDFSTILMRGDKVGLIGQNGAGKTT 360 RQGQVKLEVGTGERSGKIVAELENVNKAYGPKTIVRDFSTILMRGDKVGLIGQNGAGKTT Sbjct: 301 RQGQVKLEVGTGERSGKIVAELENVNKAYGPKTIVRDFSTILMRGDKVGLIGQNGAGKTT 360 Query: 361 LLKLILGEEAPDSGTVKQGTKMQVAYFDQMRAQLNEETTLADTIAPGSDWVEVNGQRKHV 420 LLKLILGEEAPDSGTVKQGTKMQVAYFDQMRAQLNEETTLADTIAPGSDWVEVNGQRKHV Sbjct: 361 LLKLILGEEAPDSGTVKQGTKMQVAYFDQMRAQLNEETTLADTIAPGSDWVEVNGQRKHV 420 Query: 421 MTYLSDFLFAPERARSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLE 480 MTYLSDFLFAPERARSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLE Sbjct: 421 MTYLSDFLFAPERARSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLE 480 Query: 481 ELLEEYDGTVFLVSHDRMFLDNVVTQVIAAEGNGVWREYVGGYSDWERQRPTQQAAVSKA 540 ELLEEY+GTVFLVSHDRMFLDNVVTQVIA+EGNGVWREYVGGYSDWERQRP QQAA SKA Sbjct: 481 ELLEEYEGTVFLVSHDRMFLDNVVTQVIASEGNGVWREYVGGYSDWERQRPAQQAASSKA 540 Query: 541 AAKAADKSESKAESTMAAPVVAAPVAKKKLSYKEQRELDELPKRIAALEAEQKEISAKLA 600 AAKAADKSE KAESTMAAPVVA AKKKLSYKEQRELDELPKRIAALEAEQKE+SAKLA Sbjct: 541 AAKAADKSEVKAESTMAAPVVAPVAAKKKLSYKEQRELDELPKRIAALEAEQKELSAKLA 600 Query: 601 DPDLYKKSADEAVKLNQRFAEIDEELLVSLERWEEIEGKK 640 DPDLYKK ADEAVKLNQRFAEIDEELLVSLERWEEIEGK+ Sbjct: 601 DPDLYKKGADEAVKLNQRFAEIDEELLVSLERWEEIEGKQ 640 >gi|300313989|ref|YP_003778081.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 555 Score = 352 bits (903), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 206/528 (39%), Positives = 308/528 (58%), Gaps = 8/528 (1%) Query: 18 LLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLLVMQQGLKIAYVDQEPHF 77 +L S G +IG++G NG+GKS+LLKI+AG K +G + L I Y+ QEP Sbjct: 21 ILKDISLSFFPGAKIGVLGLNGSGKSTLLKIMAGIDKEIEGEAIPMPNLNIGYLPQEPQL 80 Query: 78 PAEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDD--ALLERMHQIQTVLDAADAWSI 135 AE TV V S LGE+ A+ +A+ + ++ D AL +++ ++ AAD S+ Sbjct: 81 DAEKTVRQEVESALGEVFEAQAKLDAVYAAYAEEDADFDALATEQARLEAIIAAADGNSL 140 Query: 136 GNKVETTLDKLNLNR-EARIGELSGGMKKRVALACGLVGNPDVLLLDEPTNHLDFGSILW 194 ++E D L L +A+IG LSGG K+RVAL L+ PD+LLLDEPTNHLD S+ W Sbjct: 141 NQQLEMAADALRLPPWDAKIGVLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVDW 200 Query: 195 LEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFTTYQTRKAELLANEEV 254 LE L+ F G+++ ITHDR FLDN + I+ELDRG + + GN++++ +K L EE Sbjct: 201 LEQFLQRFPGTVVAITHDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEARLKQEEA 260 Query: 255 ENAKFDKFLAQEEVWIRKGVQARRTRDEGRVRRLEALRVQRSERRERQGQVKLEVGTGER 314 + K +A+E W+R+ + R+ + + R+ R L ++R ++ + V ER Sbjct: 261 SESARQKTIAKELEWVRQNPKGRQAKSKARLARFNELSEYEYQKRNETQEIFIPVA--ER 318 Query: 315 SGKIVAELENVNKAYGPKTIVRDFSTILMRGDKVGLIGQNGAGKTTLLKLILGEEAPDSG 374 G V E +NV+K YG + ++ D + + G VG+IG NGAGK+TL +++ G E PDSG Sbjct: 319 LGNEVIEFKNVSKGYGDRLLIDDLNFKIPAGAIVGIIGPNGAGKSTLFRMLAGRETPDSG 378 Query: 375 TVKQGTKMQVAYFDQMRAQLNEETTLADTIAPGSDWVEVNGQRKHVMTYLSDFLFAPERA 434 V G ++V+ DQ R L + T+ + ++ G+D + V YL F F Sbjct: 379 EVVLGPTVKVSLVDQSREDLGNKKTVFEDVSGGADILTVGRFEMPSRAYLGRFNFKGGDQ 438 Query: 435 RSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLEELLEEYDGTVFLVS 494 + V LSGGER RL LA+ + NVL+LDEP+NDLD++TL LE+ L E+ GTV ++S Sbjct: 439 QKIVGNLSGGERGRLHLAKTLLQGGNVLLLDEPSNDLDVETLRALEDALLEFAGTVLVIS 498 Query: 495 HDRMFLDNVVTQVIAAEGNGVWREYVGGYSDWE---RQRPTQQAAVSK 539 HDR FLD + T +IA EG+ + G Y ++E ++R ++AA K Sbjct: 499 HDRWFLDRIATHIIAFEGDSQVTFFDGNYQEYEADKKKRLGEEAAKPK 546 Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/252 (31%), Positives = 121/252 (48%), Gaps = 35/252 (13%) Query: 3 VISLTDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLLVM 62 VI + +G L+D F + G +G+IG NG GKS+L +++AGR D G +V+ Sbjct: 323 VIEFKNVSKGYGDRLLIDDLNFKIPAGAIVGIIGPNGAGKSTLFRMLAGRETPDSGEVVL 382 Query: 63 QQGLKIAYVDQE-PHFPAEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERMH 121 +K++ VDQ + TVF+ V+ G L G+F + R + Sbjct: 383 GPTVKVSLVDQSREDLGNKKTVFEDVSGGADIL---------TVGRF------EMPSRAY 427 Query: 122 QIQTVLDAADAWSIGNKVETTLDKLNLNREARIGELSGGMKKRVALACGLVGNPDVLLLD 181 + D I +G LSGG + R+ LA L+ +VLLLD Sbjct: 428 LGRFNFKGGDQQKI------------------VGNLSGGERGRLHLAKTLLQGGNVLLLD 469 Query: 182 EPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELD-RGKILSFPGNFTT 240 EP+N LD ++ LE L +F G++L I+HDR FLD ++T II + ++ F GN+ Sbjct: 470 EPSNDLDVETLRALEDALLEFAGTVLVISHDRWFLDRIATHIIAFEGDSQVTFFDGNYQE 529 Query: 241 YQTRKAELLANE 252 Y+ K + L E Sbjct: 530 YEADKKKRLGEE 541 >gi|300311473|ref|YP_003775565.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 660 Score = 255 bits (651), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 203/657 (30%), Positives = 310/657 (47%), Gaps = 74/657 (11%) Query: 3 VISLTDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLLVM 62 +I L G LL++ + +L G++IGLIG NG GKSSL ++ G D G + Sbjct: 1 MIRFQQVSLQRGVKPLLENVDLTLNPGDKIGLIGANGAGKSSLFAMLRGELHADQGNIDF 60 Query: 63 QQGLKIAYVDQEPHFPA-EMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERMH 121 ++AYV QE PA + + G L L AE Q +D + +H Sbjct: 61 PARWRMAYVAQET--PALDRPAIEYAIDGDAHLRQLEAELARAEAQPDDKHDGNHIAELH 118 Query: 122 QIQTVLDAADAWSIGNKVETTLDKLNLNREAR---IGELSGGMKKRVALACGLVGNPDVL 178 T L ADA+++ ++ E L L + E + SGG + R+ LA L+ D+L Sbjct: 119 ---TALADADAYTVRSRAEQLLLGLGFSLEQMERPVASFSGGWRMRLNLAQALMCPSDLL 175 Query: 179 LLDEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNF 238 LLDEPTNHLD +I+WLE L+ ++G++L I+HDR FLD V I+ +D K+ + GN+ Sbjct: 176 LLDEPTNHLDLDAIIWLEDWLKRYEGTLLIISHDRDFLDGVVNVIVHIDDRKLKRYSGNY 235 Query: 239 TTYQTRKA---ELLA----NEEVENAKFDKFLAQEEVWIRKGVQAR-RTRDEGRVRRLEA 290 + ++ +++ EL+A ++ + A F+ + + K QA+ R + ++ L Sbjct: 236 SAFERQRSAQLELMAGMIEKQQRQRAHLQSFIDRFKAKATKARQAQSRMKALSKMEELAP 295 Query: 291 LRVQRSERRERQGQVKLEVGTGERSGKIVAELENVNKAY-------GP---KTIVRDFST 340 LR + E + + +E VN Y P K IV Sbjct: 296 LRA--------AAEFSFEFREPLSAPNPLLVMEKVNAGYHIEGKNGAPDEDKIIVHGIDF 347 Query: 341 ILMRGDKVGLIGQNGAGKTTLLKLILGEEAPDSGTVKQGTKMQVAYFDQMRAQL--NEET 398 L G ++GL+G NGAGK+TL+K + GE P SGT + G + + YF Q + ++ ++E+ Sbjct: 348 SLQNGQRIGLLGVNGAGKSTLIKTVAGEIDPLSGTARLGKGLVIGYFAQHQVEMLRHDES 407 Query: 399 TLADTIAPGSDWVEVNGQRKHVMTYLSDFLFAPERARSPVRTLSGGERNRLLLARLFAKP 458 L D E + + +L F F A S + SGGE+ RL LA + + Sbjct: 408 PLWHLTRLAPDVRE-----QELRNFLGSFNFNGTMATSSIAPFSGGEKARLALALIVWQR 462 Query: 459 ANVLVLDEPTNDLDIDTLELLEELLEEYDGTVFLVSHDRMFLDNVVTQ-VIAAEGNGVWR 517 N+L+LDEPTN LD++T E L L +++GT+ LVSHDR L Q +I AEG + Sbjct: 463 PNLLLLDEPTNHLDLETREALTMALAQFEGTLVLVSHDRHLLRATTDQFLIVAEGK--LQ 520 Query: 518 EYVG---GYSDW--------------ERQRPTQQAAVSKAAAKAADKSESK---AESTMA 557 + G Y DW PT V A A D+ E K AE Sbjct: 521 PFDGDLDDYKDWLFKTKLAARNDAAAAAPLPTASQPVESAPAALVDRKEQKRLEAEQRQK 580 Query: 558 APVVAAPVAKKKLSYKEQRELDELPKRIAALEAEQKEISAKLADPDLYKKSADEAVK 614 + P+ + + L ++IA L + EI A+LA PD+Y + E +K Sbjct: 581 MSALKKPIEAR---------IKRLDEQIAKLNVRKAEIDARLASPDIYDAANKEELK 628 >gi|300311530|ref|YP_003775622.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 532 Score = 247 bits (630), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 162/535 (30%), Positives = 280/535 (52%), Gaps = 21/535 (3%) Query: 3 VISLTDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLLVM 62 ++S + + FG L ++ G R GLIG NG GKS+ +KI+ G + G + + Sbjct: 1 MLSTANITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSL 60 Query: 63 QQGLKIAYVDQEPHFPAEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERMHQ 122 ++ + Q+ EM V D V G E+ A ++E +AI +DD + + Sbjct: 61 DVNERLGKLRQDQFAYEEMRVLDVVMMGHVEMWAAMSERDAIYANPDATDDDYM--KAAD 118 Query: 123 IQTVLDAADAWSIGNKVETTLDKLNLNREARIGELSG---GMKKRVALACGLVGNPDVLL 179 ++ D ++ + L + + E G +S G K RV LA L NPD+LL Sbjct: 119 LEAKFAEYDGYTAEARAGELLLGVGVPIEQHNGPMSNVAPGWKLRVLLAQALFSNPDILL 178 Query: 180 LDEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFT 239 LDEPTN+LD +I WLE +L + +++ I+HDR FL+ V T + ++D G + +PGN+ Sbjct: 179 LDEPTNNLDINTIRWLEEVLNERNSTMIIISHDRHFLNQVCTHMADMDYGTLKIYPGNYD 238 Query: 240 TYQTRKAELLANEEVENAKFDKFLAQEEVWIRK--GVQARRTRDEGRVRRLEALRVQRSE 297 Y ++ A + NAK + +A+ + ++R+ +++ + R ++++ ++V+ + Sbjct: 239 DYMLASSQARAQQLAANAKAKEKVAELQDFVRRFSANKSKARQATSRAKQIDKIKVEDIK 298 Query: 298 RRERQGQ-VKLEVGTGERS-GKIVAELENVNKAYGPKTIVRDFSTILMRGDKVGLIGQNG 355 R ++ E GE+ ++ E + + K Y + I ++FS ++ G+K+ +IG NG Sbjct: 299 PSSRVNPFIRFE---GEKKLHRLAVETQGITKTY-DRDIFKNFSIMVEAGEKIAIIGANG 354 Query: 356 AGKTTLLKLILGEEA---PDSGTVKQGTKMQVAYFDQ-MRAQLNEETTLADTIAPGSDWV 411 AGKTTLL+ I G+ PD G VK V Y Q + TL D + W Sbjct: 355 AGKTTLLRSIGGDVTGLHPDGGLVKWAENANVGYMPQDPTEEFAGGETLTDWMGK---WT 411 Query: 412 EVNGQRKHVMTYLSDFLFAPERARSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDL 471 + + V L LF+ + + V+ LSGGE+ R++ +L NVL++DEPTN + Sbjct: 412 QEGDDDQAVRGILGRLLFSGDDVKKSVKVLSGGEKGRMMYGKLMLGRHNVLLMDEPTNHM 471 Query: 472 DIDTLELLEELLEEYDGTVFLVSHDRMFLDNVVTQVIAAEGNGVWREYVGGYSDW 526 D++++E L LE+Y GT+ VSHDR F+ ++ T+++ + +G ++ GGY D+ Sbjct: 472 DMESIESLNIALEKYAGTLIFVSHDREFVSSLATRILEVK-DGQVIDFQGGYEDY 525 Score = 102 bits (254), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 81/263 (30%), Positives = 128/263 (48%), Gaps = 44/263 (16%) Query: 324 NVNKAYGPKTIVRDFSTILMRGDKVGLIGQNGAGKTTLLKLILGEEAPDSGTVKQGT--- 380 N+ +G K + + S G++ GLIG NG GK+T +K++ G+ P +G V Sbjct: 6 NITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDVNER 65 Query: 381 -----KMQVAYFD------------QMRAQLNE-ETTLADTIAPGSDWVEVNGQRKHVMT 422 + Q AY + +M A ++E + A+ A D+++ Sbjct: 66 LGKLRQDQFAYEEMRVLDVVMMGHVEMWAAMSERDAIYANPDATDDDYMKAADLEAKFAE 125 Query: 423 YLSDFLFAPERA--------------RSPVRTLSGGERNRLLLAR-LFAKPANVLVLDEP 467 Y D A RA P+ ++ G + R+LLA+ LF+ P ++L+LDEP Sbjct: 126 Y--DGYTAEARAGELLLGVGVPIEQHNGPMSNVAPGWKLRVLLAQALFSNP-DILLLDEP 182 Query: 468 TNDLDIDTLELLEELLEEYDGTVFLVSHDRMFLDNVVTQVIAAEGNGVWREYVGGYSDW- 526 TN+LDI+T+ LEE+L E + T+ ++SHDR FL+ V T +A G + Y G Y D+ Sbjct: 183 TNNLDINTIRWLEEVLNERNSTMIIISHDRHFLNQVCTH-MADMDYGTLKIYPGNYDDYM 241 Query: 527 ---ERQRPTQQAAVSKAAAKAAD 546 + R Q AA +KA K A+ Sbjct: 242 LASSQARAQQLAANAKAKEKVAE 264 >gi|300311157|ref|YP_003775249.1| multidrug ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 923 Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 128/527 (24%), Positives = 204/527 (38%), Gaps = 103/527 (19%) Query: 2 AVISLTDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLLV 61 V L L +G LD + G +GLIG +G GKSSLL ++AG L G L Sbjct: 9 CVARLQRVALRYGKTVALDAVSLDIPAGCMVGLIGPDGVGKSSLLSLVAGARALQQGELA 68 Query: 62 MQQGLKIAYVDQEPHFPAEMTVFDAVASGLGE--LPAL-LAEYEAITGQFGGDNDDALLE 118 + G + Q+ H + GLG+ P L + E G+ G + Sbjct: 69 VLGG----DMRQQRHRQQACPRIAYMPQGLGKNLYPTLSVEENLQFFGRLFGQDASERRR 124 Query: 119 RMHQIQTVLDAADAWSIGNKVETTLDKLNLNREARIGELSGGMKKRVALACGLVGNPDVL 178 R+ ++ T T LDK L R A G+LSGGMK+++ L C L+ +PD+L Sbjct: 125 RIDELTT--------------STGLDKF-LARPA--GKLSGGMKQKLGLCCSLIHDPDLL 167 Query: 179 LLDEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNF 238 +LDEPT +D L R + + Sbjct: 168 ILDEPTTGVD------------------------------------PLSRAQFWDLIAHI 191 Query: 239 TTYQTRKAELLANEEVENA-KFDKFLAQEEVWI-RKGVQARRTRDEGRVRRLEALRVQRS 296 + + ++A +E A +FD +A +E + G + + G EA Sbjct: 192 RQQRAGMSVIVATAYMEEADRFDWLVAMDEGRVLATGTPVQLHQRTGTASLEEAFIALLP 251 Query: 297 ERRERQGQ-VKLEVGTGERSGKIVAELENVNKAYGPKTIVRDFSTILMRGDKVGLIGQNG 355 E + R Q V++ + E + + +G V + RG+ G +G NG Sbjct: 252 EEKRRGHQTVQVTPLDDTIDSGVAIEAKGLTMRFGDFLAVDHVDFRIRRGEIFGFLGSNG 311 Query: 356 AGKTTLLKLILGEEAPDSGTV----------KQGTKMQVAYFDQ---MRAQLNEETTL-- 400 GK+T +K++ G G T+ +V Y Q + +L+ L Sbjct: 312 CGKSTTMKMLTGLLPASEGQAWLFGREIDPRDMATRARVGYMSQAFSLYGELSVRQNLVL 371 Query: 401 --------ADTIAPGSDWVEVNGQRKHVMTYLSDFLFAPERARSPVRTLSGGERNRLLLA 452 A+ IA +D + R+ + + D L PE +L G R RL LA Sbjct: 372 HARLYRVPAEQIAARTDEMA----RRFGLLDVMDSL--PE-------SLPLGIRQRLSLA 418 Query: 453 RLFAKPANVLVLDEPTNDLDIDTLELLEELL----EEYDGTVFLVSH 495 +L+LDEPT+ +D +L +L+ + T+F+ +H Sbjct: 419 VAMVHKPELLILDEPTSGVDPIARDLFWQLMIGLARQDQVTIFISTH 465 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.316 0.134 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,880,633 Number of extensions: 77770 Number of successful extensions: 991 Number of sequences better than 1.0e-08: 66 Number of HSP's gapped: 907 Number of HSP's successfully gapped: 89 Length of query: 640 Length of database: 1,619,870 Length adjustment: 91 Effective length of query: 549 Effective length of database: 1,188,985 Effective search space: 652752765 Effective search space used: 652752765 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 134 (56.2 bits)