BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1149.p
         (386 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310678|ref|YP_003774770.1| phenol/naphthocyclinone hydroxy...   744   0.0  
gi|300310820|ref|YP_003774912.1| naphthocyclinone hydroxylase [H...   375   e-105

>gi|300310678|ref|YP_003774770.1| phenol/naphthocyclinone
           hydroxylase [Herbaspirillum seropedicae SmR1]
          Length = 386

 Score =  744 bits (1921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/386 (94%), Positives = 376/386 (97%)

Query: 1   MSVMENPAALAAREEDALAPLLAEIRARRDEFATQRFVPRDFIAQLKKAGVYRAATPQCF 60
           MSVMENPAALAAREEDALAPLLAEIRARRDEFA QRFVP+DFIAQLKKAGVYRAATPQCF
Sbjct: 1   MSVMENPAALAAREEDALAPLLAEIRARRDEFAAQRFVPKDFIAQLKKAGVYRAATPQCF 60

Query: 61  GGSGMSPMAFLQLIEKISQADASVGWVASFGSASVYLAALPKQTQATLYAKGPDLTFAGG 120
           GGSGMSPM FLQLIE+IS ADASVGWVASFGSASVYLAALP++TQA LYAKGPDLTFAGG
Sbjct: 61  GGSGMSPMGFLQLIERISAADASVGWVASFGSASVYLAALPRETQAKLYAKGPDLTFAGG 120

Query: 121 LFPIQPATQVEGGWMVDGTWKFGSGCKGADVLGVGIGAAVPGQAGSKPRTAVLPPQQVEI 180
           LFPIQPATQVEGGWMVDGTWKF SG KGADVLGVGIGAAVPGQAGSKPRTAVLPP+QVEI
Sbjct: 121 LFPIQPATQVEGGWMVDGTWKFASGSKGADVLGVGIGAAVPGQAGSKPRTAVLPPEQVEI 180

Query: 181 IDNWDVMGLVGTGSHDLKVSQQFVPDEWTFIRGGAATIDEPLYRYPTIAYAAQVLAVVNL 240
           IDNWDVMGL+GTGSHDLKVSQQFVP+EWTFIRGG  TIDEPLYRYPTIAYAAQVLAVVNL
Sbjct: 181 IDNWDVMGLLGTGSHDLKVSQQFVPEEWTFIRGGEPTIDEPLYRYPTIAYAAQVLAVVNL 240

Query: 241 GVGRAAIDEINQMSGGRVAITGAPKLADRSYVRIEVAKAEAKLRSARAFLYDATGEVWDS 300
           GV RAAIDEINQMSGGRVAITGAPKLADRSYVRIEVAKAEAKLRSARAFLYDATGEVW+S
Sbjct: 241 GVARAAIDEINQMSGGRVAITGAPKLADRSYVRIEVAKAEAKLRSARAFLYDATGEVWNS 300

Query: 301 ILAGDPVTPEQVSLLRLTAVEIAKVGNEVVQAMFGLAGTTAIYNHHPLQRYLRDAAVVKQ 360
           ILAG+PVTPEQVSLLRLTAVEIAKVGNEV QAMFGLAGTTAIY+HHPLQRYLRDAAVVKQ
Sbjct: 301 ILAGNPVTPEQVSLLRLTAVEIAKVGNEVTQAMFGLAGTTAIYSHHPLQRYLRDAAVVKQ 360

Query: 361 HAFLGEGIYDGAGAVTLGVPPMPGFL 386
           HAFLGEGIYDGAGAVTLGVPPMPGFL
Sbjct: 361 HAFLGEGIYDGAGAVTLGVPPMPGFL 386


>gi|300310820|ref|YP_003774912.1| naphthocyclinone hydroxylase
           [Herbaspirillum seropedicae SmR1]
          Length = 394

 Score =  375 bits (964), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/356 (51%), Positives = 246/356 (69%), Gaps = 1/356 (0%)

Query: 21  LLAEIRARRDEFATQRFVPRDFIAQLKKAGVYRAATPQCFGGSGMSPMAFLQLIEKISQA 80
           L+AE+ ARRDEF     VPRD IA +K+AG++R++TP+ FGG  ++P  FL ++E+IS+A
Sbjct: 31  LIAEVTARRDEFDQLGHVPRDLIATMKQAGIFRSSTPRRFGGEPLAPAPFLAMVERISRA 90

Query: 81  DASVGWVASFGSASVYLAALPKQTQATLYAKGPDLTFAGGLFPIQPATQVEGGWMVDGTW 140
           D S GWVA+FGSA+ YLAALP +TQ  +YA GPD  +AGGL+P+Q A  V GGW + G W
Sbjct: 91  DGSAGWVAAFGSANTYLAALPIETQRQIYADGPDQVYAGGLYPLQEAKPVPGGWNISGRW 150

Query: 141 KFGSGCKGADVLGVGIGAAVPGQAGSKPR-TAVLPPQQVEIIDNWDVMGLVGTGSHDLKV 199
            F SGCKGAD +GVGI      +   +P   AV+P  +VEIIDNW+V+G+ GTGSHD ++
Sbjct: 151 HFASGCKGADWIGVGIKDGGGDEGAPRPALMAVMPAAEVEIIDNWNVVGMQGTGSHDTRL 210

Query: 200 SQQFVPDEWTFIRGGAATIDEPLYRYPTIAYAAQVLAVVNLGVGRAAIDEINQMSGGRVA 259
             +FV  EWT  RG    IDEPLYRYP +AY A+V A VN+G+ RAA+D +  M+GG   
Sbjct: 211 KDKFVAHEWTCARGAPGLIDEPLYRYPALAYQAEVHAAVNIGLARAALDIVTDMAGGAKI 270

Query: 260 ITGAPKLADRSYVRIEVAKAEAKLRSARAFLYDATGEVWDSILAGDPVTPEQVSLLRLTA 319
           + GA +LADR+Y +I++  +EAK RSAR F YDA  + W+ ILAG+P++ E   +L+L+A
Sbjct: 271 MPGALRLADRAYYKIKLGLSEAKWRSARMFFYDACEQAWEQILAGNPISEETDMMLKLSA 330

Query: 320 VEIAKVGNEVVQAMFGLAGTTAIYNHHPLQRYLRDAAVVKQHAFLGEGIYDGAGAV 375
              A+V  EVV   +  AG  AI   H LQR +RDA VV QHA L E  Y+ AGA+
Sbjct: 331 TYAARVSMEVVNDAYQAAGMAAIQRSHRLQRIVRDAMVVTQHAALSELNYESAGAL 386


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.319    0.135    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,261,613
Number of extensions: 57676
Number of successful extensions: 200
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 199
Number of HSP's successfully gapped: 2
Length of query: 386
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 299
Effective length of database: 1,207,925
Effective search space: 361169575
Effective search space used: 361169575
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)