BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0926.p
         (306 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310457|ref|YP_003774549.1| GNAT family acetyltransferase [...   532   e-152
gi|300310461|ref|YP_003774553.1| histone acetyltransferase HPA2 ...   256   2e-69

>gi|300310457|ref|YP_003774549.1| GNAT family acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 300

 Score =  532 bits (1370), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 265/306 (86%), Positives = 279/306 (91%), Gaps = 6/306 (1%)

Query: 1   MPALSPPDTHPGQTAQQVRPPLPDLLLRPMAADDLGACHRLSLRFKWPHRLEDWDFLLQM 60
           MPA   P TH  QT   VR PLPDLLLRPM ADDL  CHRLSLRFKWPHRLEDW+FLLQ 
Sbjct: 1   MPA---PSTHDPQT---VRAPLPDLLLRPMEADDLAHCHRLSLRFKWPHRLEDWNFLLQR 54

Query: 61  GQGYLLEDTASDAPLRIVGSVVCTPYGEHHAVIGMLLVQAELQRRGLGRRLMQHAASQVS 120
           GQGYLLE+T ++APLR+VGSVVCTPYG HHAVIGMLLVQAELQRRGLGRRLMQ AAS V 
Sbjct: 55  GQGYLLENTDAEAPLRVVGSVVCTPYGAHHAVIGMLLVQAELQRRGLGRRLMQQAASAVQ 114

Query: 121 AHSLVVNATAAGMPLYKQLGFVQQDVLHQFQGASAQPVLVSLPPGERVRPMGKNDVARLL 180
            HSL+VNATAAGMPLYKQLGFVQQDVLHQFQG+SAQPVLVSLPPGERVRPMGKNDV RLL
Sbjct: 115 GHSLIVNATAAGMPLYKQLGFVQQDVLHQFQGSSAQPVLVSLPPGERVRPMGKNDVPRLL 174

Query: 181 ELDAQASGMDRSKLLLALLEISEGVALDRDGEMLGFALVRRFGHGRVIGPVVAPDAERAK 240
            LDAQA+GMDRSKLLLALL++SE VALDRDGEMLGFALVRRFGHGRVIGPVVAPDAERAK
Sbjct: 175 ALDAQATGMDRSKLLLALLDMSEAVALDRDGEMLGFALVRRFGHGRVIGPVVAPDAERAK 234

Query: 241 GLIAHWINTYSDSFIRIDVFESTGLATWLDKLGVTCVDHVTRMCKGTPPVHNPDMQLFSI 300
           GLIAHWINTYSDSFIR+DVFESTGL +WLDKLG+TCVDHVTRMCKG PPV +P MQLFSI
Sbjct: 235 GLIAHWINTYSDSFIRLDVFESTGLPSWLDKLGLTCVDHVTRMCKGEPPVRDPGMQLFSI 294

Query: 301 VNQALG 306
           VNQALG
Sbjct: 295 VNQALG 300


>gi|300310461|ref|YP_003774553.1| histone acetyltransferase HPA2
           protein [Herbaspirillum seropedicae SmR1]
          Length = 295

 Score =  256 bits (653), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 133/297 (44%), Positives = 182/297 (61%), Gaps = 13/297 (4%)

Query: 12  GQTAQQVRPPLPDLLLRPMAADDLGACHRLSLRFKWPHRLEDWDFLLQMGQGYLLEDTAS 71
           GQ AQ          LRPM  +DL +CH +SL   WPHRL DW F  Q+   + +E    
Sbjct: 10  GQAAQTT--------LRPMRPEDLASCHAMSLHLHWPHRLADWQFHHQVSSSWAVELEQP 61

Query: 72  DAPLRIVGSVVCTPYGEHHAVIGMLLVQAELQRRGLGRRLMQHAASQVSAHSLVVNATAA 131
           D    + GS +  P GE +A +G++++   LQ RGLGR +MQ       + ++++NAT A
Sbjct: 62  DGARSVAGSGMLCPLGEDYASLGLVIIADALQGRGLGRAMMQRLLQDAGSRNVILNATDA 121

Query: 132 GMPLYKQLGFVQQDVL--HQFQGASAQPVLVSLPPGERVRPMGKNDVARLLELDAQASGM 189
           G PLY++LGF   D L  HQ   A AQPVL +     R+RP+ K +    L LD QASGM
Sbjct: 122 GRPLYEKLGFAVTDTLSQHQSTTARAQPVLAA---DARIRPLRKEEAPAFLALDRQASGM 178

Query: 190 DRSKLLLALLEISEGVALDRDGEMLGFALVRRFGHGRVIGPVVAPDAERAKGLIAHWINT 249
           DRS LL  LL  +E   L++ G++ G A++R FG GRVIGPV+A   E AK LIAHW++ 
Sbjct: 179 DRSTLLQPLLATAEVAVLEQAGQVKGVAMLREFGRGRVIGPVIASQVEDAKALIAHWVHA 238

Query: 250 YSDSFIRIDVFESTGLATWLDKLGVTCVDHVTRMCKGTPPVHNPDMQLFSIVNQALG 306
           Y  +++RIDV   TGL  WL+++G+TCVD+V  MC+GTPP      + +S++NQALG
Sbjct: 239 YPGAYLRIDVPGRTGLKPWLEEIGLTCVDNVVSMCRGTPPSPATPWRTYSMINQALG 295


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.322    0.138    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 939,093
Number of extensions: 37691
Number of successful extensions: 103
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 102
Number of HSP's successfully gapped: 2
Length of query: 306
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 221
Effective length of database: 1,217,395
Effective search space: 269044295
Effective search space used: 269044295
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)