BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0903.p
         (488 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310431|ref|YP_003774523.1| glucose-6-phosphate 1-dehydroge...   959   0.0  

>gi|300310431|ref|YP_003774523.1| glucose-6-phosphate
           1-dehydrogenase [Herbaspirillum seropedicae SmR1]
          Length = 488

 Score =  959 bits (2479), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/488 (94%), Positives = 476/488 (97%)

Query: 1   MATSDFDLVLFGGTGDLSMRKLLPALYARDRGRDLPPNARIICLGREEKSREDFLKLVEK 60
           MA SDFDLVLFGGTGDLSMRKLLPALYARDR RDLPP ARI+CLGR+EK+RE+F+++VEK
Sbjct: 1   MAISDFDLVLFGGTGDLSMRKLLPALYARDRARDLPPEARIVCLGRDEKTREEFIQIVEK 60

Query: 61  DSKPHVPPSNLDAAVWERFTNRLQYASVNAKDAASFAHLKEALRDIDGLARVFYLATPPS 120
           DSKPHVP +NLD AVWERF NRLQYASVNAKD ASF HLKEALRD +GLARVFYLATPPS
Sbjct: 61  DSKPHVPAANLDKAVWERFCNRLQYASVNAKDGASFVHLKEALRDTEGLARVFYLATPPS 120

Query: 121 LFASICENLSKAGLVTPSARVVLEKPLGRDLESARDINAQVGRFFQESQIFRIDHYLGKE 180
           LFASICENLSK GLVTP++RVVLEKPLGRDL SARDINAQVGR+FQESQIFRIDHYLGKE
Sbjct: 121 LFASICENLSKGGLVTPASRVVLEKPLGRDLASARDINAQVGRYFQESQIFRIDHYLGKE 180

Query: 181 AVQNLLALRFGNVLFEPLWRREWISDVQITIAEELGVGGRFDYYDTSGALRDMLQNHLLQ 240
           AVQNLLALRFGNVLFEPLWRREWISDVQITIAEELGVGGRFDYYDTSGALRDMLQNHLLQ
Sbjct: 181 AVQNLLALRFGNVLFEPLWRREWISDVQITIAEELGVGGRFDYYDTSGALRDMLQNHLLQ 240

Query: 241 LLCIVAMEPPVSNSADAVRDEKLKVLRSLKRFTPTTLAMNVVRGQYRAGHVDGVAVPAYR 300
           LLCIVAMEPPVSNSADAVRDEKLKVLRSLKRFTPTTLAMNVVRGQYRAGHV+GVAVP YR
Sbjct: 241 LLCIVAMEPPVSNSADAVRDEKLKVLRSLKRFTPTTLAMNVVRGQYRAGHVNGVAVPGYR 300

Query: 301 KEADANPDSRTETYVAVKAEIDTWRWAGVPFYLRTGKRMADSLAEIVVRFKSVPHSIFAH 360
           KEADANPDSRTETYVAVKAEIDTWRWAGVPFYLRTGKRMADSLAEIVVRFKSVPHSIFAH
Sbjct: 301 KEADANPDSRTETYVAVKAEIDTWRWAGVPFYLRTGKRMADSLAEIVVRFKSVPHSIFAH 360

Query: 361 QNDTPNCLVIRLQPDEGLHMNLMAKQPGDGMRLRPVELELDFREKFKTPRMDAYERLLLD 420
           QNDTPNCLVIRLQPDEGLHMNLMAKQPGDGMRLRPVELELDFREKFKTPRMDAYERLLLD
Sbjct: 361 QNDTPNCLVIRLQPDEGLHMNLMAKQPGDGMRLRPVELELDFREKFKTPRMDAYERLLLD 420

Query: 421 VLRGHLTLFMRSDELEAAWEWVEPILNYWDQQEADPVPYNAGTWGPAAASALIGRDGLQW 480
           VLRGHLTLFMRSDELEAAWEWVEPILN+WDQQEADPVPYNAGTWGPAAASALIGRDGLQW
Sbjct: 421 VLRGHLTLFMRSDELEAAWEWVEPILNHWDQQEADPVPYNAGTWGPAAASALIGRDGLQW 480

Query: 481 REEALPEV 488
           REEALPEV
Sbjct: 481 REEALPEV 488


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.321    0.137    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,604,515
Number of extensions: 68423
Number of successful extensions: 175
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 175
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 1,619,870
Length adjustment: 89
Effective length of query: 399
Effective length of database: 1,198,455
Effective search space: 478183545
Effective search space used: 478183545
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 132 (55.5 bits)