BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0866.p (811 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300313794|ref|YP_003777886.1| ferrichrome-iron receptor prote... 1342 0.0 gi|300311652|ref|YP_003775744.1| TonB-dependent siderophore rece... 411 e-115 gi|300311660|ref|YP_003775752.1| TonB-dependent receptor protein... 394 e-110 gi|300310824|ref|YP_003774916.1| hydroxamate-type ferrisideropho... 254 2e-68 gi|300312129|ref|YP_003776221.1| TonB-dependent ferric sideropho... 207 3e-54 >gi|300313794|ref|YP_003777886.1| ferrichrome-iron receptor protein [Herbaspirillum seropedicae SmR1] Length = 817 Score = 1342 bits (3472), Expect = 0.0, Method: Compositional matrix adjust. Identities = 661/817 (80%), Positives = 724/817 (88%), Gaps = 6/817 (0%) Query: 1 MSLSKPTRMSPMLRQPLIMK--LALAQALMSTTALYAQPVQQRFDIPGGPLEDVLTRFAQ 58 MSL + T MSP+ R + LA ALM T AL+AQ VQQRFDIP GPLE VL RFAQ Sbjct: 1 MSLFRRTHMSPLSRPRALSPRWWPLAPALMVTAALHAQAVQQRFDIPPGPLEQVLARFAQ 60 Query: 59 AADVPLALQAGKLQGLRSPGLVGSYSVEAGFHALLAGSGYRIGKTAAGYVLMPDTGGATP 118 AADVPLALQ+GKLQG SPGL GSYSV+AGF ALLAGSGYRIGKTA+GYVL+P + ATP Sbjct: 61 AADVPLALQSGKLQGQHSPGLAGSYSVQAGFDALLAGSGYRIGKTASGYVLVPASEAATP 120 Query: 119 TATPLASAQGSLPTINVSANA----ESWSARTSSSTTKTETPLIEVPQSISVVTAERIAA 174 +A +A GSLP I +SA+A + W+AR S+STTKT TPLIEVPQSISVVTAERIAA Sbjct: 121 SAATTPAASGSLPAIQISASADPGEQRWTARDSASTTKTATPLIEVPQSISVVTAERIAA 180 Query: 175 LGATTARDALGYTPGVNISPYGADSRYDWINLRGFDAYSPGFYLDGLPLRNANSFAVWRT 234 +GATTARDALGYTPGVNISPYG+DSRYDWINLRGFDAYSPGFYLDGLPLRNANSFAVWRT Sbjct: 181 MGATTARDALGYTPGVNISPYGSDSRYDWINLRGFDAYSPGFYLDGLPLRNANSFAVWRT 240 Query: 235 ENYGIDQIAVLRGPASVLFGQAGPGGVVNVVSKLPSAETQRELQVQLGSNQRRQVGGDFG 294 ENYGI+Q+AVLRGPASVL+GQAGPGGVVNVVSKLPSA+ RELQVQLGS++RRQVG D G Sbjct: 241 ENYGIEQLAVLRGPASVLYGQAGPGGVVNVVSKLPSADAPRELQVQLGSDRRRQVGADIG 300 Query: 295 GAMDADGKLLYRFIGVIRDAEMPAGGMKNDRIYLAPSLTWKISRDTSLTLQASLLRDNGG 354 GA+DADG+LLYR IGV+RDAE+PAGGMKNDR+YLAPSL WKIS TSLTLQA+LLRD GG Sbjct: 301 GAIDADGRLLYRVIGVVRDAELPAGGMKNDRLYLAPSLVWKISAATSLTLQAALLRDQGG 360 Query: 355 VYTRTRPLVGSLVPTPIGTTIPSGLYIGNPNFDHFSQNQELLGYRLEHRFNEAVVFRQSA 414 VYTRTRPLVGSLVPT IGTTIPS LY GNP+FDHFSQ+QEL GYRL HRF+E F QSA Sbjct: 361 VYTRTRPLVGSLVPTAIGTTIPSELYTGNPHFDHFSQDQELFGYRLAHRFDERFAFTQSA 420 Query: 415 RVGHMSVDYHALQQPNFITVDATVPNDPANFQSLSRNLFGSRESATMFSIDNQLQLDFST 474 RVGHMS DY A+Q P F T++A PNDP NFQ+L+RNLFGSRESATMFSIDNQLQ DFST Sbjct: 421 RVGHMSTDYRAVQTPRFATLNAANPNDPVNFQNLTRNLFGSRESATMFSIDNQLQADFST 480 Query: 475 AGIRHTMLLGVDFQRSRFDALSFSGGSAPLLDIAAPTYPNGPFVVPAPYNDTRAVLTQTG 534 +RHT+L GVD+QRSRFDA+SFSGGSAPLL+IAAP+YPNGPFVVPAPY+D RAVLTQTG Sbjct: 481 GAVRHTVLAGVDYQRSRFDAVSFSGGSAPLLNIAAPSYPNGPFVVPAPYSDNRAVLTQTG 540 Query: 535 FYLQDQIKWDNGVELTLGGRHDSADNTVDNRLDGTRTSSTDRKFTARAALLYRAPNGLAP 594 YLQDQIKW+NG E+TLGGRHDSA +TVDNRLDG+RTSSTDRKFT RAA+LY A NGLAP Sbjct: 541 IYLQDQIKWNNGWEVTLGGRHDSASSTVDNRLDGSRTSSTDRKFTRRAAVLYHAANGLAP 600 Query: 595 YVSYTESFNPTATVDPLTNLPFGPETGKQTEVGLRYQPSGTRDLYSAALFDLKRQNYISY 654 Y+SYTESFNPTATV+PLTN FGPETGKQTEVGLRYQP GT DLYSAALFDLKRQNYISY Sbjct: 601 YLSYTESFNPTATVNPLTNQSFGPETGKQTEVGLRYQPPGTNDLYSAALFDLKRQNYISY 660 Query: 655 DANFMPTQKGEISVRGLELEAVTEPLPSLRLTAAYSYTPRAVVTNSSRPAEIGKQATAVP 714 DANFMPTQKGEI+VRGLELEAVT+P+ +LRLTAAYSYTPRAVVT SSRPAEIGKQA AV Sbjct: 661 DANFMPTQKGEIAVRGLELEAVTQPMAALRLTAAYSYTPRAVVTASSRPAEIGKQAAAVL 720 Query: 715 LHQLSLWGDHRLHNGIRLGLGARYVSATSGNGGGTPVKVPGYTLLDGLVGYDLAHWSLAL 774 LHQ S+WGDHRL NG+RLGLGARYVSATSGNGGGTPVKVPGYTLLDGL+GYD A WSLAL Sbjct: 721 LHQFSVWGDHRLGNGVRLGLGARYVSATSGNGGGTPVKVPGYTLLDGLLGYDFARWSLAL 780 Query: 775 NLRNLTNKTYLTNCDTAAATCYYGDQRSILATATYRW 811 NLRNLT+K YLTNCDT A+ CYYGDQRS+LATA+YRW Sbjct: 781 NLRNLTDKRYLTNCDTTASMCYYGDQRSVLATASYRW 817 >gi|300311652|ref|YP_003775744.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 832 Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust. Identities = 293/810 (36%), Positives = 409/810 (50%), Gaps = 64/810 (7%) Query: 30 TTALYAQPVQQRFDIPGGPLEDVLTRFAQAADVPLALQAGKLQGLRSPGLVGSYSVEAGF 89 T A A ++ F++ GPLED L RFA+ A + ++ + +QG + L G YSV G Sbjct: 59 TQAQGAPEARRHFNVAAGPLEDALNRFARQAGITMSYASALVQGRQVTALQGEYSVSQGL 118 Query: 90 HALLAGSGYRIGKTAAG-YVLMPDTGGATPTATPLASAQGSLPTINVSAN---------A 139 LLAGSG R ++ G Y L P GA L L I VS Sbjct: 119 EVLLAGSGLRAVRSDNGAYALQPLVQGAPEQVDTLHR----LGNITVSGRRDEPGAADPV 174 Query: 140 ESWSARTSSSTTKTETPLIEVPQSISVVTAERIAALGATTARDALGYTPGVNISPYGADS 199 E + A S++ TKT+TPL+E+ QS+SVVT + A GA + D L Y PG N +G D Sbjct: 175 EGYVALRSATATKTDTPLLELAQSVSVVTRAEMEARGANSILDVLRYMPGANTETHGVDP 234 Query: 200 R-YDWINLRGF-DAYSPGFYLDGLPLRNANSFAVWRTENYGIDQIAVLRGPASVLFGQAG 257 R YD+ NLRGF +A + YL+GL + + F ++RTE YG++++ VLRG S FGQA Sbjct: 235 RGYDYFNLRGFINAQTTSNYLNGL-RQIPSGFGMFRTETYGLERVEVLRGANSASFGQAD 293 Query: 258 PGGVVNVVSKLPSAETQRELQVQLGSNQRRQVGGDFGGAMDADGKLLYRFIGVIRDAEMP 317 PGGVVN VSKL + + EL V +GS QRRQV D G +D +G++ R +G++ D + Sbjct: 294 PGGVVNRVSKLAGSGARNELMVDVGSFQRRQVAADLSGDLDPEGRVQARLVGLLLDGDTQ 353 Query: 318 ---AGGM--KNDRIYLAPSLTWKISRDTSLTLQASLLRDNGGV--YTRTRPLVGSLVPTP 370 A G NDR+YLAPSL + S DTSL L A L+D G +T R GS T Sbjct: 354 FRYANGRAGDNDRLYLAPSLKIRPSADTSLILLAEYLKDRSGSGRWTAVRA-DGSQTHT- 411 Query: 371 IGTTIPSGLYIGNPNFDHFSQNQELLGYRLEHRFNEAVVFRQSARVGHMSVDYHALQQPN 430 +G+P+FD Q LG+ LEHR + RQ R + Y A+ + Sbjct: 412 ---------LLGDPDFDQQRGEQWSLGWMLEHRLDATWTLRQHFRQAALRSQYAAVNPGS 462 Query: 431 FITVDATVPNDPANFQSLSRN--LFGSRESATMFSIDNQLQLDFSTAGIRHTMLLGVDFQ 488 F N LSR+ ++ ++ T+ +DNQ H +LLG+D+ Sbjct: 463 F------------NGSILSRSTAVYDTQVENTL--LDNQALARVQWGQAEHQVLLGLDWS 508 Query: 489 RSRFDALSFSGGSAPLLDIAAPTYPNGPFVVPAPYNDTRAVLTQTGFYLQDQIKWDNGVE 548 + G AP LDI P Y + D L QTG Y QDQI++ + Sbjct: 509 HMSAREQRYR-GVAPSLDIDNPVYTQPIPAATTRFGDLDQTLVQTGLYAQDQIRYQR-IV 566 Query: 549 LTLGGRHDSADNTVDNRLDGTRTSSTDRKFTARAALLYRAPNGLAPYVSYTESFNPTATV 608 LTLG R+D + ++ N + + ++ + F+ R L Y LAPYVSY SF P A Sbjct: 567 LTLGARYDRSRDSTRNAANNSLQAAEENAFSGRVGLSYLVSPELAPYVSYGSSFLPQAGQ 626 Query: 609 DPLTNLPFGPETGKQTEVGLRYQPSGTRDLYSAALFDLKRQNYISYD---ANFMPTQKGE 665 D + PF T +Q E G++YQP R +Y+AAL+ L + N + D ANF G+ Sbjct: 627 D-VDGKPFKAATARQIEAGVKYQPGHGRAVYTAALYQLVKDNALGSDPLHANF-SVSNGQ 684 Query: 666 ISVRGLELEAVTEPLPSLRLTAAYSYTPRAVVTNSSRPAEIGKQATAVPLHQLSLWGDHR 725 + RG+ELEA E LP L +TAAY+Y + V T ++ P IGK VP SLW D+ Sbjct: 685 VRSRGVELEAKGELLPGLNVTAAYTYA-QVVNTQNAAPELIGKTPILVPRQAASLWLDYT 743 Query: 726 LHN----GIRLGLGARYVSATSGNGGGTPVKVPGYTLLDGLVGYDLAHWSLALNLRNLTN 781 + G+ +G GARY T V+ +LD +V D W A N+ NL N Sbjct: 744 VQRGDLAGMGVGAGARYTGRNYATAANT-VENAAQVILDAMVRIDRGPWRYAFNVSNLAN 802 Query: 782 KTYLTNCDTAAATCYYGDQRSILATATYRW 811 + Y + TC++ +R+ + +A YRW Sbjct: 803 RQYTSCLAEPTLTCFWAPERTAVLSARYRW 832 >gi|300311660|ref|YP_003775752.1| TonB-dependent receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust. Identities = 267/708 (37%), Positives = 376/708 (53%), Gaps = 59/708 (8%) Query: 130 LPTINVSANAES-------WSARTSSSTTKTETPLIEVPQSISVVTAERIAALGATTARD 182 LP + + A+AE+ + A+ ++S TKT+TP++EVPQS+SVVT + + A G T+ D Sbjct: 31 LPQVEIKADAETANGPVNGYVAKRTASATKTDTPVLEVPQSVSVVTRDEMDARGVTSLLD 90 Query: 183 ALGYTPGVNISPYGADSR-YDWINLRGF-DAYSPGFYLDGLPLRNANSFAVWRTENYGID 240 L Y PG N +G D R Y++ NLRGF +A +L+GL + F +RTE YG++ Sbjct: 91 VLRYMPGANSETHGVDPRGYEYFNLRGFINAQVTSNFLNGL-RQIPGGFGQFRTETYGME 149 Query: 241 QIAVLRGPASVLFGQAGPGGVVNVVSKLPSAETQRELQVQLGSNQRRQVGGDFGGAMDAD 300 +I VLRGP SV FGQA PGGV+N VSKLP + EL V +GS R+QV D G D Sbjct: 150 RIEVLRGPGSVTFGQADPGGVINRVSKLPGMDIPNELGVDIGSFNRKQVVADLNGHTQ-D 208 Query: 301 GKLLYRFIGVIRDAEMP-----AGGMKNDRIYLAPSLTWKISRDTSLTLQASLLRDNGGV 355 G+ L+R +G+ D+ N+R YLAPSLTW+ S TSLTL A + D G Sbjct: 209 GEYLWRVVGLGLDSNNQYKFNNGQSGDNNRFYLAPSLTWRPSASTSLTLMADYMNDRSGS 268 Query: 356 --YTRTRPLVGSLVPTPIGTTIPSGLYIGNPNFDHFSQNQELLGYRLEHRFNEAVVFRQS 413 +T RP G + L IG+PNFD S +Q GY+ EH+F+ A FRQ+ Sbjct: 269 SRWTAVRP----------GNVLTHTL-IGDPNFDRQSNDQWSFGYQFEHKFDNAWTFRQN 317 Query: 414 ARVGHMSVDYHALQQPNFITVDATVPNDPANFQSLSRNLFGSRESATMFSIDNQLQLDFS 473 R ++ Y AL P +T + + ++ S+ T+ +DNQL+ Sbjct: 318 FRQANLKSVYAAL-NPGTLT---------GSVLTRGTTVYNSQVDNTL--VDNQLEGRLK 365 Query: 474 TAGIRHTMLLGVDFQRSRFDALSFSGGSAPLLDIAAPTYPNGPFVVPAP---YNDTRAVL 530 HT+L G+D+ R +D G+AP L+I P Y +PA + + + Sbjct: 366 WGATEHTVLFGLDWSR-MYDREVRYRGAAPSLNIDNPVY---GVTIPAATTLFGNLEENM 421 Query: 531 TQTGFYLQDQIKWDNGVELTLGGRHDSADNTVDNRLDGTRTSSTDRKFTARAALLYRAPN 590 QTG Y QDQIK+D + LTLGGR D + N + T T S D + R L Y Sbjct: 422 NQTGLYAQDQIKFDQRLTLTLGGRWDKVKDETRNYFNRTTTRSDDSALSGRIGLSYLVTR 481 Query: 591 GLAPYVSYTESFNPTATVDPLTNLPFGPETGKQTEVGLRYQPSGTRDLYSAALFDLKRQN 650 +APYVSY SF P D PF P +Q EVG++YQP+ + L++AALF+L + N Sbjct: 482 DIAPYVSYATSFLPQTGSD-FNGKPFDPTKARQAEVGIKYQPADGKTLFTAALFELTKTN 540 Query: 651 YISYD---ANFMPTQKGEISVRGLELEAVTEPLPSLRLTAAYSYTPRAVVTNSSRPAEIG 707 + D NF GEI RGLELEA E + L L+A+Y+YT N++ + +G Sbjct: 541 VQTPDPAHTNF-NVLSGEIKSRGLELEAKGEIVKGLNLSASYTYTDVKNTQNNT-ASLLG 598 Query: 708 KQATAVPLHQLSLWGDHRLH----NGIRLGLGARYVSATSGNGGGTPVKVPGYTLLDGLV 763 KQ VP S+W D+ + G +G GARY + + T VK G T+ D + Sbjct: 599 KQPILVPRQAASVWADYTVQGGPLAGAGIGGGARYTGSNYADAANT-VKNGGVTVFDAVF 657 Query: 764 GYDLAHWSLALNLRNLTNKTYLTNCDTAAATCYYGDQRSILATATYRW 811 Y+L W ALN+ N+TNK Y + TC++ +R+ + +A YRW Sbjct: 658 HYNLNRWRYALNISNITNKEYTSCLAEPTTTCFWAAERTAILSARYRW 705 >gi|300310824|ref|YP_003774916.1| hydroxamate-type ferrisiderophore receptor signal peptide protein, tonB-dependent receptor [Herbaspirillum seropedicae SmR1] Length = 715 Score = 254 bits (649), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 213/697 (30%), Positives = 318/697 (45%), Gaps = 44/697 (6%) Query: 130 LPTINVSANA--ESWSARTSSSTTKTETPLIEVPQSISVVTAERIAALGATTARDALGYT 187 LPT++V+A+ +S T + K+ TPL E PQSISVVT + + A + DAL Sbjct: 48 LPTVSVTADGYTDSKFKATQTQVNKSSTPLSETPQSISVVTRAMMDSQQAVSLSDALKNV 107 Query: 188 PGVNISPYGADSRYDWINLRGFDAYSPGFYLDGLPLRNANSFAVWRTENYGIDQIAVLRG 247 GV YG D I +RG A S YLDGL ++ A + YG+ Q+ VL+G Sbjct: 108 SGVVAQQYGRRGWDDLI-IRGQVA-SDSLYLDGLRTTASSRVA---EQLYGLQQVEVLKG 162 Query: 248 PASVLFGQAGPGGVVNVVSKLPSAETQRELQVQLGSNQRRQVGGDFGGAMDADGKLLYRF 307 P S+L+G PGG+VN+VSK P + V +GS+ Q D ++ +GK +R Sbjct: 163 PGSLLYGLVLPGGLVNMVSKRPQGSDFANVDVTIGSHDLYQSTVDLNKSLSENGKQAFRI 222 Query: 308 IGVIRDAEMPAGGMKNDRIYLAPSLTWKISRDTSLTLQASLLRDNGGVYTRTR--PLVGS 365 G+I +++ + Y+APSL+ + T T+ S N Y R + PL GS Sbjct: 223 NGLISNSDDATDHVWFKNRYIAPSLSLDLGARTDFTILTSYQERN---YVRQQGLPLSGS 279 Query: 366 LVPTPIGTTIPSGLYIGNPNFDHFSQNQELLGYRLEHRFNEAVVFRQSARVGHMSVDYHA 425 + P G + L+IG P ++ N+ +GY L HRF++ + R ++ Sbjct: 280 ITPNASG-PLARSLFIGEPGARPYAANETRIGYSLTHRFDDGWTLNNNLRYQQFTMSGQL 338 Query: 426 LQQPNFITVDATVPNDPANFQSLSRNLFGSRESATMFSIDNQLQLDFSTAGIRHTMLLGV 485 + N SL+R+ F++D +Q F+TA +H + LG Sbjct: 339 ISINNLTGT------------SLTRSAMDQTFEGQTFTMDTNVQRSFATAWGKHEVTLGT 386 Query: 486 DFQRSRFDALSFSGGSAPLLDIAAPTYPNGPFVVPAPYNDTRAVLT-----QTGFYLQDQ 540 D+ SR + + PL +I P+Y V P T A L TGFY +D+ Sbjct: 387 DYMNSRELERTLTCSVTPLSNIYNPSY-GARVVCPTQLTSTNAKLNDTSVRDTGFYARDK 445 Query: 541 IKWDNGVELTLGGRHDSADNTVDNRLDGTRTSSTDRKFTARAALLYRAPNGLAPYVSYTE 600 I +L G R D A + L G+ + + TA AA++ +G+ PY+SY Sbjct: 446 ISLGERWQLLAGVRQDRAATYTTSALTGSHSDNASSATTASAAIMVELWHGVRPYLSYAT 505 Query: 601 SFNPTATVDPLTNLPFGPETGKQTEVGLRYQPSGTRDLYSAALFDLKRQNYISYDANFMP 660 SF P + F PETGKQ E G++ R + ALFDL+R+N + D + Sbjct: 506 SFYPNSGT-AFDGSIFKPETGKQWETGVKVDLDEGRTSINFALFDLRRRNVLVTDPDHTS 564 Query: 661 TQK--GEISVRGLELEAVTEPLPSLRLTAAYSYTPRAVVTN-SSRPAEIGKQATAVPLHQ 717 + G +G E+ ++ L L AAYSYT V+ + R +G+ VP H Sbjct: 565 YKMAIGGQRSQGGEISVTSDLRNGLSLNAAYSYTAAIVIDDGGQRSTTVGQWLDNVPRHN 624 Query: 718 LSLWGDHRLH---NGIRLGLGARYVSATSGNGGGTPVKVPGYTLLDGLVGYDLAHWSLAL 774 + +R +G L G R S NG +PGY L D V Y+ W AL Sbjct: 625 FTTSARYRFSGELSGWELNGGVRGQSMMRTNG----YTLPGYVLADIGVAYNAERWRTAL 680 Query: 775 NLRNLTNKTYLTNCDTAAATCYYGDQRSILATATYRW 811 N++N+ N Y A GD R+++ T YR+ Sbjct: 681 NVKNVFNTEYYAGGLGKAVAL--GDDRTVMLTLGYRY 715 >gi|300312129|ref|YP_003776221.1| TonB-dependent ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 796 Score = 207 bits (527), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 217/796 (27%), Positives = 362/796 (45%), Gaps = 72/796 (9%) Query: 44 IPGGPLEDVLTRFAQAADVPLALQAGKLQGLRSPGLVGSYSVEAGFHALLAGSGYRIGKT 103 +P GPL+ L R AQ + + ++ + ++ L+S + G+++ L+ +G + T Sbjct: 45 LPSGPLDQTLLRIAQQSGLLISYEPALVKSLQSAPVEGNFTAPEAIKKALSNTGLELVAT 104 Query: 104 AAG-YVLMPDTGGATPTATPL----ASAQGSLPTINVSANAES----WSARTSSSTTKTE 154 +G + L P G +T + T A A LP I+V+A A+S + A +S++ ++T+ Sbjct: 105 PSGKWTLRPVAGASTTSTTETPAHKAIADAELPLISVAATADSGGTGFVAESSATFSRTD 164 Query: 155 TPLIEVPQSISVVTAERIAALGATTARDALGYTPGV--NISPYGADSRYDWINLRGFDAY 212 TPL E P+S+SV+ A I + A T D L GV PYG S +RG+ Sbjct: 165 TPLSETPKSVSVINAAVIQSQSAQTLSDVLRNASGVVARPGPYGVPS----FAIRGYVGN 220 Query: 213 SPGFYLDGLPLRNANSFAVWRTENYGIDQIAVLRGPASVLFGQAGPGGVVNVVSKLPSAE 272 +P DGL + + T I + V++GP++++ A PGGVVNV+ K P E Sbjct: 221 AP-VMSDGLSSYGSAASPAALTPTIAIAGVEVVKGPSAIMAADAPPGGVVNVIKKAPQVE 279 Query: 273 TQRELQVQLGSNQRRQVGGDFGGAMDADGKLLYRF-IGVIRDAEMPAGGMKNDRIYLAPS 331 E+QV GSN QV D GA+D D +L YRF + + +E G Y+AP+ Sbjct: 280 PFHEVQVAYGSNSFSQVAFDSTGAIDEDKRLRYRFVVSADKSSENFMGYDGGRHFYIAPT 339 Query: 332 LTWKISRDTSLTLQASLLRDNGGVYTRTR-PLVGSLVPTPIGTTIPSGLYIGNP---NFD 387 L WK R T LTL G +T TR P V G + Y+ +P D Sbjct: 340 LQWK-DRSTDLTL--------GYAHTVTREPFPQYTVGYARGGYVDG--YVEHPLGNRGD 388 Query: 388 HFSQNQELLGYRLEHRFNEAVVFRQSARVGHMSVDYHALQQPNFITVDATVPNDPANFQS 447 HFS + L +LE + ++ + F ++ G+ S Q + +TV N A Sbjct: 389 HFSMTADELTAKLEQKLSDNLTFV--SKNGYTSTT----QGQDGWAAASTVTNSNA---- 438 Query: 448 LSRNLFGSRESATMFSIDNQ--LQLDFSTAGIRHTMLLGVDFQRSRFDALSFSGGSAPLL 505 L G + SA ++ ++Q L+L AG++ T L+GVD+ + + S + Sbjct: 439 --LTLLGFKSSANYYTANSQNYLRLKSDLAGVKSTTLVGVDYSYMHYVQYDRNSSSTTTI 496 Query: 506 DIAAPTYPNGPFVVPAPYN---DTRAVLTQTGFYLQDQIKWDNGVELTLGGRHDSADNTV 562 T P P Y T+ V G YLQ+Q+ + N + + R DS ++ Sbjct: 497 PDIFGTINVAPISSPLTYQFGGQTQRV----GSYLQEQLIYSN-LTVLASIRRDSYLSST 551 Query: 563 DNRLDGTRTSSTDRKFTARAALLYRAPNGLAPYVSYTESFNPTATVDPLTNLPFGPETGK 622 + ++ L+Y+ +APYV++ + F P V P+ + Sbjct: 552 NIVGRAPSGGMHQTAYSPSLGLMYQLTPEIAPYVNWNKGFQPN-NVTAYGGGLLAPKQSE 610 Query: 623 QTEVGLRYQPSGTRDLYSAALFDLKRQNYISYDA---NFMPTQKGEISVRGLELEAVTEP 679 Q E G+++ + + AL+ + N D F + G +S +GLE+E + Sbjct: 611 QFEAGVKFNLMDDKLELTTALYHIDYTNQSISDPVHRGFYISTGGAVS-QGLEVELKGQI 669 Query: 680 LPSLRLTAAYSYTPRAVVTNSSRPAEIGKQATAVPLHQLSLWGDHRLHN----GIRLGLG 735 +P L + A Y+Y V + + ++ +P H S+W + + G +G+G Sbjct: 670 MPGLNVIAQYAY--NNYVQDYAPTVKVN-----LPHHTGSIWTTYNFRSPALQGFGVGMG 722 Query: 736 ARYVSATSGNGGGTPVKVPGYTLLDGLVGYDLAHWSLALNLRNLTNKTYLTNCDTAAATC 795 ++S+ G VPG T D + Y + +SL L+++NL N L + T+A+ Sbjct: 723 V-FMSSGQDVGSTGNYHVPGQTETDLGLFYKMEKYSLNLSVKNLFNHK-LYSSSTSASFI 780 Query: 796 YYGDQRSILATATYRW 811 G +R+++ T TY + Sbjct: 781 PMGPERTLMLTGTYDF 796 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.317 0.134 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,609,115 Number of extensions: 116716 Number of successful extensions: 442 Number of sequences better than 1.0e-08: 18 Number of HSP's gapped: 352 Number of HSP's successfully gapped: 19 Length of query: 811 Length of database: 1,619,870 Length adjustment: 93 Effective length of query: 718 Effective length of database: 1,179,515 Effective search space: 846891770 Effective search space used: 846891770 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 135 (56.6 bits)