BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0779.p (723 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310319|ref|YP_003774411.1| TonB-dependent siderophore rece... 1249 0.0 gi|300309869|ref|YP_003773961.1| TonB-dependent ferric sideropho... 180 3e-46 gi|300311911|ref|YP_003776003.1| TonB-dependent siderophore rece... 169 7e-43 gi|300309379|ref|YP_003773471.1| TonB-dependent ferric sideropho... 166 6e-42 gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore rece... 147 3e-36 >gi|300310319|ref|YP_003774411.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 723 Score = 1249 bits (3233), Expect = 0.0, Method: Compositional matrix adjust. Identities = 600/725 (82%), Positives = 669/725 (92%), Gaps = 4/725 (0%) Query: 1 MKRIAPLASTLMLTLAGTSLGLSAAARAADTPDDKGE--ALPTINVTASGAGKEGARVRS 58 MKRIAPLASTLMLTLAGTSLGL A RAADT D++G+ +LPTINVTASGA G + RS Sbjct: 1 MKRIAPLASTLMLTLAGTSLGLPAVTRAADTSDNQGQDQSLPTINVTASGA--TGTQARS 58 Query: 59 AAVAGFDDAPLLDTPASVAVVTGAQMRDQQSRVLSDVVKNDASINENYAPVGYYENFSIR 118 A+VAGFDDAPLLDTPASV+VVT AQM+DQQSR+LSDVVKNDASINENYAPVGYYENFSIR Sbjct: 59 ASVAGFDDAPLLDTPASVSVVTSAQMKDQQSRLLSDVVKNDASINENYAPVGYYENFSIR 118 Query: 119 GVTLDPASAYRIDGLTVAGEQTIALENKERVEFLKGVAGLQAGVSSAGGIVNYVTKRPAN 178 G TLDPASAYR++GLTVAGEQTIALENKERVEFLKGVAGLQAGV +AGG+VNYVTKRPAN Sbjct: 119 GFTLDPASAYRVNGLTVAGEQTIALENKERVEFLKGVAGLQAGVVAAGGLVNYVTKRPAN 178 Query: 179 VRSITLGSDSYGSRYLATDLGALFGEQQQFGLRLNAAHEDIHSYVNNGDGWRDFASLATT 238 VRSITLG+DS GSRYLATDLGALFGE +QFGLR+NAAHEDIHSYV+NGDGWRDFASL+ T Sbjct: 179 VRSITLGTDSNGSRYLATDLGALFGEHKQFGLRINAAHEDIHSYVSNGDGWRDFASLSAT 238 Query: 239 WALSSKTLLQFDAEYQQKAQHSVAGYQLLGGTTLPSGVSPKTMLTPQSWAQPVRDSSLNY 298 WA+S++TL+QFDAEYQQKAQ SVAGYQLLGG TLPSGVSP TMLTPQ W+QPVRDSS+N Sbjct: 239 WAISARTLVQFDAEYQQKAQRSVAGYQLLGGATLPSGVSPSTMLTPQPWSQPVRDSSVNA 298 Query: 299 RLRLDTEFNANWRGYVQAGRSRAVIDDYLAFPYGSGGGASSTFAANGDFDVYDYRVPDDE 358 RLR+DTEFNA+WRGYVQAGRSRAVIDDYLAFPYGSG GAS TFAANGDFDVYDYRVP+DE Sbjct: 299 RLRIDTEFNADWRGYVQAGRSRAVIDDYLAFPYGSGNGASPTFAANGDFDVYDYRVPNDE 358 Query: 359 RRNDDAQAVMIGKFATGWLQHELTVGLEMSRRVVDKSDGISVLVGSGNIYTGTPALAPAT 418 RRND+ QAV IGKFA+GW+QHELT+G+ MSRR+VDKSDGISVLVG GNIY GTP L A Sbjct: 359 RRNDEVQAVAIGKFASGWVQHELTLGMAMSRRIVDKSDGISVLVGQGNIYNGTPVLPAAN 418 Query: 419 TLPGPAYRNLDSRQKALFLSDRLQFSERWQVIAGGRQVWLNEQAFGADGSVTRNTARNLF 478 + AYRNLDSRQKALF SDR+QFS+RWQV+AGGRQVWLNEQ+F + G+VTR+T+RNLF Sbjct: 419 AVIPAAYRNLDSRQKALFFSDRMQFSQRWQVLAGGRQVWLNEQSFNSTGAVTRDTSRNLF 478 Query: 479 LPQLALIYKPAQNMSLYGSYAETLTLGSSAPFWVSNFPTTLPPSVARQLEAGVKYDVSPE 538 LPQLALI+KP QN+SLYGSYAETL+LGSSAPFWVSNFP TLPPSVARQLEAGVKY+ SPE Sbjct: 479 LPQLALIFKPVQNLSLYGSYAETLSLGSSAPFWVSNFPVTLPPSVARQLEAGVKYEFSPE 538 Query: 539 LALTAAIFRIRKAYEFQQPDNSSAGFTYVQQGRQTNTGIELGASGKLAPRLAVGASVSAT 598 LALTAA+FR RKAYE+Q+PDNS GFTYVQQG+QTNTG+ELGA+GKL PRLA+GA+ + Sbjct: 539 LALTAAVFRTRKAYEYQKPDNSPTGFTYVQQGQQTNTGVELGANGKLTPRLAIGAAATVL 598 Query: 599 RARASDTGTAAYDDQQVVNVPRLRSSVYADYAVPSLEGLNLLGSWLYSSSKPATRDGSVS 658 RARASDTGTA +DDQQVVNVPRLR++VYADYAVP +EG+N++GSW YS+SKPATRDGSV+ Sbjct: 599 RARASDTGTARFDDQQVVNVPRLRTAVYADYAVPGMEGVNVMGSWNYSASKPATRDGSVN 658 Query: 659 LPAVHVFNAGLRYRMRINTHTATLRANVDNLFDKRYWKDAGQYLGDGYVHLGAPRTVRVS 718 LPAVHVFNAGLRY++R+N H ATLRAN+DNLFDKRYWKDAGQYLGDGYVHLGAPRT R+S Sbjct: 659 LPAVHVFNAGLRYQLRVNGHAATLRANIDNLFDKRYWKDAGQYLGDGYVHLGAPRTARLS 718 Query: 719 LQYDF 723 LQYDF Sbjct: 719 LQYDF 723 >gi|300309869|ref|YP_003773961.1| TonB-dependent ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 725 Score = 180 bits (457), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 214/756 (28%), Positives = 339/756 (44%), Gaps = 81/756 (10%) Query: 1 MKRIAPLASTLMLTLAGTSLGLSAAARAADTPDDKGEALPTINVT--------ASGAGKE 52 R +A L + GT L + AA A D+ + +LPT+ VT A+ AG + Sbjct: 18 CTRPTAVAQAARLLVLGTLLA-APAAFAQDSGTAQDASLPTVTVTGRSDTGLPAAYAGGQ 76 Query: 53 GARVRSAAVAGFDDAPLLDTPASVAVVTGAQMRDQQSRVLSDVVKNDASINENYAPVGYY 112 AR V G D +LDTP S T +++ Q+R + DV+ ++AS+ G+ Sbjct: 77 VARGGGLGVLGTQD--VLDTPFSTLNYTVEGIKNLQARTVGDVITSEASVRNTNGDGGFG 134 Query: 113 ENFSIRG--VTLDPASAYRIDGLTVAGEQTIALENKERVEFLKGVAGLQ---AGVSSAGG 167 +++ IRG V+++ + GL + A+ ERVE LKG L GG Sbjct: 135 DSYQIRGLPVSVNDTGFNGLYGLVSLSRMSTAM--LERVEVLKGPGTLMYGMGPAGGVGG 192 Query: 168 IVNYVTKRPAN--VRSIT---LGSDSYGSRYLATDLGALFGEQQQFGLRLNAAHEDIHSY 222 +N V+KR V S+T +GS G L D+G FG+ +++G+R+NA + D + Sbjct: 193 AINLVSKRAGEEPVSSLTATYVGSAQLG---LQGDIGRRFGQDKEWGIRVNALYADGRTS 249 Query: 223 VNNGDGWRDFASLATTWALSSKTLLQFDAEYQQKAQHSVAGYQLLGGTTLPSGVSPKTML 282 V + + SLA + K DA Q + + +G T++PS + + L Sbjct: 250 VADNRQQQSMGSLALDYT-GRKLRWTLDAYTQHEDTRNFRPQFSIGTTSMPSAPAGDSNL 308 Query: 283 TPQSWAQPVRDSSLNYRLRLD-----TEFNANWRGYVQAGRSRAVIDDYLAFPYGSGGGA 337 P + Q + D + RL D T + A GY + +++ FP + G Sbjct: 309 YPGNTLQ-IDDKVVATRLEYDLTEQLTAYGA--IGYHEGATAQS-------FPSATITGL 358 Query: 338 -SSTFAANGDFDVYDYRVPDDERRNDDAQAVMIGKFATGWLQHELTVGLEMSRRVVDKSD 396 +T NG YD +V + A + +FATG +QH L+ M+ +D+ Sbjct: 359 DGATSVRNG---YYDQKVV-----STSADVGLRARFATGPVQHTLS----MAANTLDQQT 406 Query: 397 GISVLVGS----GNIYTGTPALAPATTLPGPAYRNLDSRQKALFLSDRLQFSERWQVIAG 452 V + N+Y P LAP T G +R L L+D L ++ ++ G Sbjct: 407 SYFYFVNATGVASNLYQPAP-LAPVTAARGEPLPQSQTRLSGLALTDTLSIADGRLLLTG 465 Query: 453 GRQVWLNEQAFGADGSVTRNTARNLFLPQLALIYKPAQNMSLYGSYAETLTLGSSAPFWV 512 G + +Q + S ++ + + P L ++ KP +N+SLY +Y L+ G A Sbjct: 466 GLR---RQQVYSNSFSTRSSSNKIGYSPVLGVVVKPLENLSLYANYTAGLSAGGFAGAQY 522 Query: 513 SNFPTTLPPSVARQLEAGVKYDVSPELALTAAIFRIRKAYEFQQPDNSSAGFT-----YV 567 +N P +Q E+GVK D + TAA+F+I +A NSS Sbjct: 523 ANAGQAFAPYKTKQYESGVKLDWG-RVTTTAAVFQIERA-------NSSTAVVGSQTFAT 574 Query: 568 QQGRQTNTGIELGASGKLAPRLAVGASVSATRARASDTGTAAYDDQQVVNVPRLRSSVYA 627 Q GR G+EL A G+ L + AS + R S T D +++ VP+ ++ A Sbjct: 575 QDGRARVRGLELSAYGEAQRGLRLMASGTFFETRQSHTVGGTNDGKEIGAVPKHNFNLGA 634 Query: 628 DYAVPSLEGLNLLGSWLYSSSKPATRDGSVSLPAVHVFNAGLRYRMRINTHTATLRANVD 687 D+ P L+GL L + + + + +V +P + G RY R+ T T RAN++ Sbjct: 635 DWDTPWLQGLALNTRIINTGASWYSDANTVKVPGWTRMDLGARYTSRLGGQTITYRANLE 694 Query: 688 NLFDKRYWKDAGQYLGDGYVHLGAPRTVRVSLQYDF 723 NLFDK YW + +GY GA RT+ +S Q DF Sbjct: 695 NLFDKHYW-----IMQNGYAGYGAGRTLVLSAQVDF 725 >gi|300311911|ref|YP_003776003.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 733 Score = 169 bits (428), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 203/759 (26%), Positives = 329/759 (43%), Gaps = 73/759 (9%) Query: 4 IAPLASTLMLTLAGTSLGLSAAARAADTPDDKGEALPTINVTASG-----------AGKE 52 + PLA+ + L L A A+A T D+ + LPT+ V AS AG + Sbjct: 9 LHPLAAAVALIFLAP---LPALAQAQATAPDQ-QTLPTVTVNASADASADGLPAEFAGGQ 64 Query: 53 GARVRSAAVAGFDDAPLLDTPASVAVVTGAQMRDQQSRVLSDVVKNDASINENYAPVGYY 112 AR V G D LD+P T + DQQ+ + DV+KND + + Sbjct: 65 VARGSRLGVLGNVDN--LDSPVRSVAYTQQLIADQQAHGVGDVLKNDPVVRTTRGFGNFQ 122 Query: 113 ENFSIRGVTLDPASAYRIDGLTVAGEQTIALENKERVEFLKGVA----GLQAGVSSAGGI 168 E++ IRG + + Q +A E ERVE G + G G + GG Sbjct: 123 ESYMIRGFIANSDDLMYNGLFGILPRQYVASEMMERVEVQYGASAFLNGATPGDAGLGGT 182 Query: 169 VNYVTKRPAN--VRSITLGSDSYGSRYLATDLGALFGEQQQFGLRLNAAHEDIHSYVNNG 226 +N V KR AN + +TLG +S S+Y A D+ FG Q++ G+R+NAA + V N Sbjct: 183 INIVPKRAANEPLTDLTLGYESGNSQYAALDVSRRFGPQERLGVRINAARHAGGTGVANE 242 Query: 227 DGWRDFASLATTWALSSKTLLQFDAEYQQKAQHSVAGYQLLGG--TTLPSGVSPKTMLTP 284 + SL + + L D Q+ +V +G T+LP V+P Sbjct: 243 RRETNLFSLGVDYR-GNDFRLSADLGLQENNLSNVRPSVTIGAGLTSLP--VAPSG---S 296 Query: 285 QSWAQP-----VRDSSLNYRLRLDTEFNANWRGYVQAGRSRAVIDDYLAFPYGSGGGASS 339 ++ QP RD L +R + + +++ + G + ++ L+ G Sbjct: 297 ANYGQPWSYSNARD--LFGTVRGEWDLSSSTTAWAAFGARQGTENNSLS-------GVRV 347 Query: 340 TFAANGDFDVYDYRVPDDERRNDDAQAVMIG---KFATGWLQHELTVGLEMSRRVVDKSD 396 T A+ G Y + D R DD +G TG + H+L + Sbjct: 348 TNASTGAAATYRF----DNARQDDVATGEVGVRTHLQTGAVSHKLVAAASAYSLNSRNAY 403 Query: 397 GISVLVG-SGNIYTGTPALAPATTLPGPAYRNLDSRQKALFLS----DRLQF-SERWQVI 450 G+S + N+Y T PA T G + + + K LS D L F +R V Sbjct: 404 GLSPSYALATNLYNPTNYAQPALTSLGNSLADPQTTIKTNLLSAVVSDTLGFYDDRVLVT 463 Query: 451 AGGRQVWLNEQAFGADGSVTRNTA---RNLFLPQLALIYKPAQNMSLYGSYAETLTLGSS 507 G RQ L + + NTA ++ P +++K + +S+YG+Y E L G Sbjct: 464 VGVRQQQLKSDTYAYN--TQANTAHYDQSATSPMAGVVFKLTKTLSVYGNYIEGLQQGKQ 521 Query: 508 -APFWVSNFPTTLPPSVARQLEAGVKYDVSPELALTAAIFRIRKAYEFQQPDNSSAGFTY 566 +N+ L P ++Q E GVKY++ L L AA F + ++ T Sbjct: 522 ITDTTAANYGQVLAPYKSKQKEVGVKYELG-GLGLGAAFFTTDRPLSYKD------AVTN 574 Query: 567 VQ--QGRQTNTGIELGASGKLAPRLAVGASVSATRARASDTGTAAYDDQQVVNVPRLRSS 624 ++ G+Q N G+EL A G++ + + + ++ A+ T ++A + + + VPR++++ Sbjct: 575 IEATNGKQRNRGVELTAYGEVTKGVRLLSGLTFLDAKQVQTNSSANNGKYAIGVPRVQAN 634 Query: 625 VYADYAVPSLEGLNLLGSWLYSSSKPATRDGSVSLPAVHVFNAGLRYRMRINTHTATLRA 684 + VP + GL L G Y+S++ + +P+ ++ G RY I H TLRA Sbjct: 635 AGLEVDVPGVRGLTLNGRATYTSTQYVDAANQLEVPSWVRYDLGARYLTDIGGHAVTLRA 694 Query: 685 NVDNLFDKRYWKDAGQYLGDGYVHLGAPRTVRVSLQYDF 723 ++DN+ ++ YW+ AG GY+ G PRT S+ F Sbjct: 695 SIDNVANRNYWQSAGGASNSGYLVAGNPRTFSTSVSVAF 733 >gi|300309379|ref|YP_003773471.1| TonB-dependent ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 790 Score = 166 bits (420), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 199/716 (27%), Positives = 313/716 (43%), Gaps = 76/716 (10%) Query: 41 TINVTASGAGKEGARV-RSAAVAGFDDAPLLDTPASVAVVTGAQMRDQQSRVLSDVVKND 99 TI A + GA + R A+ + ++D P + T ++DQQ+R ++D V ND Sbjct: 118 TIRAAADTSAYAGAYLARGGALGVLGNRAVMDIPLATLNYTNELLQDQQARTVADAVLND 177 Query: 100 ASINENYAPVGYYENFSIRGVTLDPASAYRIDGL-TVAGEQTIALENKERVEFLKGVAGL 158 ASI + G+ E + IRG L ++GL +A + ERV+ LKG L Sbjct: 178 ASIRMLTSTGGFGETYQIRGYGLTSGDV-GVNGLFGLASGNRMPAVMIERVDVLKGPGTL 236 Query: 159 QAGVS---SAGGIVNYVTKRPANVRSITLGSDSYGSRY---LATDLGALFGEQQQFGLRL 212 G+S S GG +N VTKR A +T + Y SR + DLG FG Q +G+R Sbjct: 237 LHGISPEGSIGGSINLVTKR-AEDEPLTRLTALYQSRRQPGVQVDLGRRFGTQDAWGIRF 295 Query: 213 NAAHEDIHSYVN---------------NGDGWRDFASLATTWALSSKTLLQFDAEYQQKA 257 N + + G GWR W+L + + ++++ + Sbjct: 296 NTVLRRGEASIAGGRQDAGAGALALDYRGRGWR--------WSLDAYRQRENSSDFRPQV 347 Query: 258 QHSVAGYQLLGGTTLPSGVSPKTMLTPQSWAQ-PVRDSSLNYRLRLDTEFNANWRGYVQA 316 G+ L G T LP+ P L S Q +D +L R++ E + Y Sbjct: 348 -----GF-LPGVTALPA--PPSGDLDFFSGNQLSFQDDAL--LTRVEVELSEQLSAYAAV 397 Query: 317 GRSRAVIDDYLAFPYGSGGGASSTFAANGDFDVYDYRVPDDERRNDDAQAVMIGKFATGW 376 G+ R+ L P GS + + N +D R A A + + ATG Sbjct: 398 GQRRSATQQNL--PTGSVDASGAGSVRNAYYDTAS--------RTLSADAGLRLQAATGA 447 Query: 377 LQHELTVGLEMSRRVVDKSDGISVLVGSGNIYTGT--PALAPATTLPGPAYRNLDSRQKA 434 ++H +++G+ R+ + +S + ++Y P ++ A T P AY D + Sbjct: 448 VRHGVSLGVTRLRQQAGNAYLVSADSSAYSLYAPATLPVISAARTEPRKAY---DMTLDS 504 Query: 435 LFLSDRLQFSE-RWQVIAGGRQVWLNEQAFG-ADGSVTRNTARNLFLPQLALIYKPAQNM 492 L L+D L+ E R Q++ G R+ + +F G+ + + P L L+ KP + Sbjct: 505 LSLTDTLRLLEDRLQLLVGARRQSVRYDSFDTVSGAQLSSYEASAISPLLGLVVKPVAGL 564 Query: 493 SLYGSYAETLTLGSSAPFWVSNFPTTLPPSVARQLEAGVKYDVSPELALTAAIFRIRK-- 550 SLY + LT G+ P ++N L P +RQLEAG K D + AA F+I Sbjct: 565 SLYANTTSGLTRGTIVPTGLANAGQVLAPYRSRQLEAGAKLDWG-RVMTQAAWFQIDNPS 623 Query: 551 ---AYEFQQPDNSSAGFTYVQQGRQTNTGIELGASGKLAPRLAVGASVSATRARASDTGT 607 + P +SS G+ GRQ N G+EL A G+L L + AS + +AR T Sbjct: 624 AVITTQASTPASSSYGY----DGRQRNRGLELSAYGELMRGLRLLASATFYQARLLRTAN 679 Query: 608 AAYDDQQVVNVPRLRSSVYADYAVPSLEGLNLLGSWLYSSSKPATRDGSVSLPAVHVFNA 667 D + VP +++ D+ L GL G +++ ++ LP+ ++ Sbjct: 680 GLNDGRTAPGVPLRAANLSLDWEPAGLPGLAFSGRMIHTGPVYYDAANTLRLPSWTRWDL 739 Query: 668 GLRYRMRINTHTATLRANVDNLFDKRYWKDAGQYLGDGYVHLGAPRTVRVSLQYDF 723 G+RYR R+ R NV+NLF+ W L YV + APRTV +S+Q D+ Sbjct: 740 GVRYRSRLGERPVVWRLNVENLFNHSTW-----LLDKPYVTVAAPRTVLLSMQVDW 790 >gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 147 bits (370), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 204/750 (27%), Positives = 323/750 (43%), Gaps = 72/750 (9%) Query: 1 MKRIAPLASTLMLTLAGTSLGLSAAARAADTPD-DKGEALPTINVTASGAGKEGARVRSA 59 MK A A+ L G + +S AA AA + D GE I VT G ++ R S Sbjct: 1 MKMTALRAAVLGALALGQTPSVSWAADAAGKQEGDLGE----IVVTGQGE-RQQYRQSST 55 Query: 60 AVAGFDDAPLLDTPASVAVVTGAQMRDQQSRVLSDVVKNDASINENYAPVGYYENFSIRG 119 + A + PL + P SV VV+ + D + L DV+ + + G ++N+SIRG Sbjct: 56 SSATRTETPLQELPQSVQVVSRQLIDDLAATRLDDVLLYVSGVARQNNFGGLWDNYSIRG 115 Query: 120 VTLDPASAYRIDGLTVAGEQTIA----LENKERVEFLKGVAGLQAGVSSAGGIVNYVTKR 175 + I A + A + N E V+FLKG A G S GG +N VTK+ Sbjct: 116 FSGSENGGMNILWNGFASNRGYAPPRDMANVESVDFLKGPAAALYGNSEPGGTINVVTKK 175 Query: 176 P----ANVRSITLGS-DSYGSRYLATDLGALFGEQQQFGLRLNAAHEDIHSYVNNGDGWR 230 P AN +++GS D+Y S +T GAL RLNAA E S + R Sbjct: 176 PQFKSANALDLSIGSNDAYRSAVDST--GAL---SSTVAYRLNAAMEHKGSMRDQVRSER 230 Query: 231 DFASLATTWALSSKTLLQFDAEYQQKAQHSVAGYQLLGGTTLPSGVSPKTMLTPQSWAQP 290 +F + A TW L+ T+L ++ E+ ++ G + G +GV P + + Sbjct: 231 EFFAPAFTWLLTENTILNYEGEFLRQKAPLDRGIVAVNGN---AGVLPVSRFLGEPNDGD 287 Query: 291 VRDSSLNYRLRLDTEFNANWRGYVQAGRSRAVIDDYLAFPYGSGGGASSTFAANGDFDVY 350 ++ + N+ L L+ N NW +D Y ++ FA D Sbjct: 288 IKMQNQNHLLTLEQRLNENWHLRTGIFHKEGSLDGY----------STEAFALQADNATL 337 Query: 351 --DYRVPDDERRNDDAQAVMIGKFATGWLQHELTVGLEMSRRVVDKS----DGISVLVGS 404 R D + QA + GKFAT + HE+ VG E+ +D+ + +V + Sbjct: 338 RRQRRYRDYSWHDTSLQAEIGGKFATAGVGHEVLVGTEVDWLTLDQRMLRINPSNVAPYA 397 Query: 405 GNIYTGTPALAPATTLPGPAYRNLDSRQ--KALFLSDRLQFSERWQVIAGGRQVWLNEQA 462 NIY P A P A + RQ L+L D+L SERW+++AG R A Sbjct: 398 VNIY--NPVYGQAQPTP-TANTDTSERQISTGLYLQDQLSLSERWRLLAGVR-----ADA 449 Query: 463 FGA------DGSVTRNTARNLFLPQLALIYKPAQNMSLYGSYAETLTLGSSAPFWVSNFP 516 F + +G+VTR ++ + P+L L Y + S+Y S +++ S + + F Sbjct: 450 FRSTLNNLRNGAVTRQD-KHAYSPRLGLTYLLTPSWSVYVSASKSFRPNSGSDVSGNAF- 507 Query: 517 TTLPPSVARQLEAGVKYDVSPELA-LTAAIFRIRKAYEFQQPDNSSAGFTYVQQGRQTNT 575 P +R EAG+K+ + + T A+F I K D ++ F+ + G + Sbjct: 508 ---SPETSRAAEAGLKFQSEDKRSGATLAVFDITKQ-NVLTTDPANPNFS-IAAGEVRSK 562 Query: 576 GIELGASGKLAPRLAVGASVSATRARASDTGTAAYDDQQVVNVPRLRSSVYADYAVPSLE 635 G+EL A+ +L V +++ T A S T ++VN+PR +S+ A + Sbjct: 563 GVELDANARLGHHWRVTGNLAYTDAYVSRDNTLPV-GSRLVNIPRSSASLLAVFEDADAH 621 Query: 636 G--LNLLGSWLYSSSKPATRDGSVSLPAVHVFNAGLRYRMRINTHTATLRANVDNLFDKR 693 G + G Y + + GS LP+ A ++ T L +V+NLF+KR Sbjct: 622 GAPYGVGGGLNYVGRRTGDQAGSFMLPSYVTARALAYWQF---TPKMKLSLDVNNLFNKR 678 Query: 694 YWKDAGQYLGDGYVHLGAPRTVRVSLQYDF 723 Y+ + L ++ G R ++L F Sbjct: 679 YYSSSYNSL---WIMPGDERNATLALNIKF 705 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.316 0.131 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,203,283 Number of extensions: 93082 Number of successful extensions: 415 Number of sequences better than 1.0e-08: 18 Number of HSP's gapped: 365 Number of HSP's successfully gapped: 25 Length of query: 723 Length of database: 1,619,870 Length adjustment: 92 Effective length of query: 631 Effective length of database: 1,184,250 Effective search space: 747261750 Effective search space used: 747261750 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 134 (56.2 bits)