BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0642.p
         (402 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310016|ref|YP_003774108.1| cyclopropane-fatty-acyl-phospho...   803   0.0  
gi|300310389|ref|YP_003774481.1| cyclopropane-fatty-acyl-phospho...   167   2e-42

>gi|300310016|ref|YP_003774108.1|
           cyclopropane-fatty-acyl-phospholipid synthase
           [Herbaspirillum seropedicae SmR1]
          Length = 407

 Score =  803 bits (2073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/401 (94%), Positives = 397/401 (99%)

Query: 1   VFWEKKLDAWVDNIRNVSALPLRLVLWNGQQYDFSSGTPEVTLKVPHASAITSLLTPSLA 60
           VFWEKKLDAWV+NIRNVSALPLRLVLWNGQQYDF SGTPEVTLKVPHASAITSLLTPSLA
Sbjct: 7   VFWEKKLDAWVENIRNVSALPLRLVLWNGQQYDFGSGTPEVTLKVPHASAITSLLTPSLA 66

Query: 61  NLGEAYVEGKIEVEGKVKSIIQVANGLASNTLKAEGRLGRMVRSVTHTKKRDAEAIQYHY 120
           NLGEAYVEGKIEVEGKVKSIIQVAN LASNTLKAEGRLGRMVRSVTHT+KRDAEAIQYHY
Sbjct: 67  NLGEAYVEGKIEVEGKVKSIIQVANSLASNTLKAEGRLGRMVRSVTHTRKRDAEAIQYHY 126

Query: 121 DVSNDFYKLFLDENMVYSCAYFENGDEDLATAQLKKIDHILEKIRLQPGQTLLDIGCGWG 180
           DVSNDFYKLFLDE+MVYSCAYFENGDEDLATAQ+KKIDHILEKI+L+PGQTLLDIGCGWG
Sbjct: 127 DVSNDFYKLFLDEHMVYSCAYFENGDEDLATAQIKKIDHILEKIQLRPGQTLLDIGCGWG 186

Query: 181 ALVLRAAQKYGARCVGITLSKNQYALARERVEAAGLADRIEIRLQDYRDLAGSFDRITSV 240
           ALVLRAAQKYGARCVG+TLS+NQYALARERVEAAGL+DRIEIRLQDYRD+ GSFDRITSV
Sbjct: 187 ALVLRAAQKYGARCVGVTLSRNQYALARERVEAAGLSDRIEIRLQDYRDVTGSFDRITSV 246

Query: 241 GMFEHVGIKNLPAYFAQIRKLLADGGMAMNHGITSTDIQNGESPYGAGEFIDKYVFPAGE 300
           GMFEHVGIKNLP+YFAQIRKLLADGGMAMNHGITSTDI+NGESPYGAGEFIDKYVFPAGE
Sbjct: 247 GMFEHVGIKNLPSYFAQIRKLLADGGMAMNHGITSTDIENGESPYGAGEFIDKYVFPAGE 306

Query: 301 LPHISTVLQTMQEGGLEAFDVENLRRHYARTCGIWADNFEANTEAIHQVTDEKHYRIWRV 360
           LPHISTVL+TMQEGGLEAFDVENLRRHYARTCGIWADNFEANTEAIH+VTDEKHYRIWRV
Sbjct: 307 LPHISTVLKTMQEGGLEAFDVENLRRHYARTCGIWADNFEANTEAIHRVTDEKHYRIWRV 366

Query: 361 YLAGSAYGFERDWISLYQVICTKAGRSAQTLPWSRKYIYQQ 401
           YLAGSAYGFERDWISLYQV+CTKAGRSAQ LPWSR+YIY++
Sbjct: 367 YLAGSAYGFERDWISLYQVVCTKAGRSAQQLPWSRQYIYRR 407


>gi|300310389|ref|YP_003774481.1|
           cyclopropane-fatty-acyl-phospholipid synthase
           [Herbaspirillum seropedicae SmR1]
          Length = 403

 Score =  167 bits (422), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 164/354 (46%), Gaps = 13/354 (3%)

Query: 39  PEVTLKVPHASAITSLLTPSLANLGEAYVEGKIEVEGKVKSIIQVANGLASNTLKAEG-- 96
           P   L++    A  ++L       GEAY  G ++       +          +   EG  
Sbjct: 53  PSAQLRILDWRACGAILRAGDIGFGEAYGHGWVDTPDLAALLRLAMRNRQVLSSAVEGGW 112

Query: 97  ------RLGRMVRSVTHTKKRDAEAIQYHYDVSNDFYKLFLDENMVYSCAYFENGDEDLA 150
                 RL  ++RS T +  R    I  HYD+ NDFY+L+LD  M YS A F    + L 
Sbjct: 113 LASWWYRLRHLLRSNTRSGSR--RNIHAHYDLGNDFYRLWLDPTMSYSSAIFSAPGQSLE 170

Query: 151 TAQLKKIDHILEKIRLQPGQTLLDIGCGWGALVLRAAQKYGARCVGITLSKNQYALARER 210
            AQ  K   I++++ L+ G  +L+IGCGWG     AA + G R  G+T+S  Q A A+ER
Sbjct: 171 QAQAAKYQRIVDQLGLRAGDRVLEIGCGWGGFAEHAA-RLGIRVHGVTISPAQLAYAQER 229

Query: 211 VEAAGLADRIEIRLQDYRDLAGSFDRITSVGMFEHVGIKNLPAYFAQIRKLLADGGMAMN 270
           +    L     + L DYRDL G +D I S+ MFE VG +    YF  +   L  GG A+ 
Sbjct: 230 MRTQQLDHLAHLELCDYRDLDGQYDAIVSIEMFEAVGERFWQTYFDTVCARLKAGGQALI 289

Query: 271 HGITSTDIQNGESPYGAGEFIDKYVFPAGELPHISTVLQTMQEGGLEAFDVENLRRHYAR 330
             IT  +    E    + +FI +++FP G LP      +  Q  GL   +  +  R YA 
Sbjct: 290 QSITIEEAVF-ERYRDSADFIREFIFPGGMLPSHERFSRCAQRAGLATRERFHFGRDYAE 348

Query: 331 TCGIWADNFEANTEAI-HQVTDEKHYRIWRVYLAGSAYGFERDWISLYQVICTK 383
           T   W D+F A  E I  Q  DE+  R+W++Y      GF+     + Q +  K
Sbjct: 349 TLRRWHDSFLAQRETIAAQGFDERFRRLWQLYYVFCEVGFDEGQTDVVQFLLHK 402


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.135    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,266,947
Number of extensions: 52770
Number of successful extensions: 172
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 169
Number of HSP's successfully gapped: 2
Length of query: 402
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 315
Effective length of database: 1,207,925
Effective search space: 380496375
Effective search space used: 380496375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 132 (55.5 bits)