BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0419.p (2897 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300312548|ref|YP_003776640.1| filamentous hemagglutinin outer... 625 e-179 gi|300310626|ref|YP_003774718.1| filamentous hemagglutinin prote... 494 e-140 >gi|300312548|ref|YP_003776640.1| filamentous hemagglutinin outer membrane protein [Herbaspirillum seropedicae SmR1] Length = 2685 Score = 625 bits (1611), Expect = e-179, Method: Compositional matrix adjust. Identities = 470/1240 (37%), Positives = 700/1240 (56%), Gaps = 150/1240 (12%) Query: 1357 NFQLDVSPTSGAGPNRANSVRAVPASVSGAAGASAGAASIRIANLDLTLPNNALYRINAG 1416 N + D++ T+G+G SV +V S GA+A A + + PN +G Sbjct: 993 NIRSDLTLTTGSG----QSVGSVLNDASARPGATAPDAPVPVR------PNPMFVPATSG 1042 Query: 1417 PAQRYLVQTDPQFVGTRNWLSSDFMLNQLGLQSGVRQ--LGDGFYEQQLVQRQIQQITGQ 1474 YL++T QF R WLSSD++L L + Q LGDGFYEQ++V+ Q+ Q+TG+ Sbjct: 1043 ---NYLLETRTQFTDRRTWLSSDYLLTALNVDPSTTQKRLGDGFYEQRMVREQMAQLTGR 1099 Query: 1475 RYLAGYSSNEAQYQALMNAGLQVAQAQRYTLGVALTDAQVAALKTDIVWLVKQTVTLADG 1534 +G ++++QYQ L+N + VAQ+ GVALT QV+ L +DIVWL Q V L DG Sbjct: 1100 P--SGSFNDDSQYQKLLNNAVSVAQSWNLRPGVALTPDQVSHLTSDIVWLETQKVVLPDG 1157 Query: 1535 STQEVLVPQVYV-HASNVEVTGQGTLIAGNDVAFQAAQDIVNSGGTIAAR-----KGVSL 1588 T+EVLVP++Y+ H + G L++G+++ QA ++I N GG I R + V + Sbjct: 1158 RTEEVLVPKLYLAHIDKDALKNSGALVSGDNITIQA-ENISNKGGFIDGRASGTGRTVLV 1216 Query: 1589 AGANLQNLGGRISGADVQVAAAQDINNIG----------------------GTIDARNSL 1626 A ++ NLGG ISG ++ ++A +++ N G+I A +L Sbjct: 1217 ASNDIANLGGGISGDEIVISAGRNVRNETLTTTQTYNNGQTSGSYTSLSNQGSIAADKNL 1276 Query: 1627 VATAGRDINSASTTVATANA--------------------VTSGTNINQNAS------MS 1660 TAG DI + TVA+ + V +G+ + N S S Sbjct: 1277 TITAGADITNLGATVASGRSGDAATGKLSMSAGRDINLGTVKTGSTYDANFSGYFGHAQS 1336 Query: 1661 VSE------ANGSLTAVAGRDINLKASGAS-----ADNITLVAQRDVNISTVHETSQEKL 1709 VS A G LT VA RD++L A+ + + N +L+A R V I + ++ + Sbjct: 1337 VSSVGSTVNAGGDLTMVAQRDLSLTAAQVAIGTNGSGNGSLMAGRAVTIGAALDRAESTI 1396 Query: 1710 ---AWDNDNRAEVNHDNAIGSTVQGKD-ISVTAGR----DINAQAAYVNAEGSLAANAGN 1761 A + +RA+ GS + IS+ AG D+ A+ + A +L A Sbjct: 1397 GRAASRSYSRADDESVAVRGSNIDAAGGISIKAGLMEKADVKVAASSITAGKALEVAATG 1456 Query: 1762 NVNIGTDVSTASARDQHKKTDAGGVLSSRTVTTDDSSSERVNQGTTLSGNTVVVRAGKDI 1821 ++N+ ++ S S ++ K+ + G+LSS T T+ + G+TLSG+T V++AGKD+ Sbjct: 1457 DINVVSEESFQS-HSEYAKSTSRGLLSSTTRTSYGKRAYTNAVGSTLSGDTTVLQAGKDM 1515 Query: 1822 NVTGSNVVATQGVGMAAGNDVNIVAA---VDSSTKNNFRKETTSGVMGAGFGVTIGTREQ 1878 ++ GSNVV++ G + A N++ + +A V+S+ +N + G GF TIGTRE Sbjct: 1516 SIVGSNVVSSAGTSLVAANNITVASASDKVESAEGSNKKSSGLLSGGGLGF--TIGTREL 1573 Query: 1879 SHDGKSQGQTASASTIGSTDGNVSIVAGNRYTQVGSDVMAPKGDIDIAAKSVEIRAAEQA 1938 + + TA +S +GS DGNVSI AGN YTQ GS+V+APKGDID+ AK + I AA + Sbjct: 1574 DNKNTTVNSTAVSSNVGSIDGNVSIKAGNAYTQSGSNVLAPKGDIDVVAKQISILAAAET 1633 Query: 1939 SRTETEDKYKQSGLTVAVTSPVISAMQTVDQMVESSGKTKNGRVKALAAATAGMSLYSAA 1998 R+ + +KQSGLT+ +TSPV+SA+QT QM +++ T GR++ LAAA G + +A Sbjct: 1634 ERSTQDMVFKQSGLTIQITSPVLSAIQTAQQMAQAAKSTSGGRMQLLAAANIGFAGKNAV 1693 Query: 1999 G-------------------------------------EMQKAGSAEGGSNIGISATIGS 2021 E + A +A+ I ++ ++G+ Sbjct: 1694 DAVRTGQGFAVDGKDNPQVRTNALDENGDLKLGADKKPETRDATAADKAGGINLAISVGA 1753 Query: 2022 SQNGSRSEQNTVTQRGATVASGGNMSIRATGDGANSNITIAGSDINAKGNLALKADNDIN 2081 S++ + S+ + T RG+T+ +GGN+S+ A G GA+SN+ + GSDI + N LKADN++ Sbjct: 1754 SKSENHSQSSASTARGSTLNAGGNISLTAQGGGADSNVIVQGSDIRSGANTLLKADNEVR 1813 Query: 2082 LIAAQNSDEQHSTRSSSSWGVGITAQIGSQSKLGITANAAGSRGKSDGKDVSNVMTQVRS 2141 L+AAQ++ EQ S+ + S VGI+ IG+ L + A +GSRG+ DG DV+ V T V + Sbjct: 1814 LLAAQSTTEQSSSNKAMSGSVGIS--IGTDGFL-VNAGLSGSRGRGDGSDVAQVNTHVDA 1870 Query: 2142 GGQIKIDSGRDTNLIGATVSGEQVQANVGR----DLNIASVQDTSTFKSRDQSIGGSATI 2197 G ++ I SG DT + GA SG+QV +VG +LNI S+QDTST+KSR QS G S + Sbjct: 1871 GNKLTIASGTDTTIKGAVASGKQVVIDVGTSGSGNLNIESLQDTSTYKSRQQSAGVSISA 1930 Query: 2198 GYGS-SASISASRSRVDADYASVGQQAGIMAGNGGFQINVKGNTDLKGAQIASTDQAVEQ 2256 G G S S++ +RS VD +YASV +Q+GI AG+ GFQINV GNTDLKGA+IASTD+A Sbjct: 1931 GMGRMSGSLNLARSSVDGNYASVNEQSGIKAGDDGFQINVAGNTDLKGAKIASTDKAAAD 1990 Query: 2257 GRNSLTTGTLTSSDIQNRSQYSAESQSASAGTS-----GGKPGGGIGIGNASGSETSVTR 2311 G+NSLTT TLT SDI+NRS + AESQS GT+ G G +G GN SGS++S TR Sbjct: 1991 GKNSLTTETLTQSDIKNRSDFKAESQSVGMGTNLAGSVLGLAGSALGRGNVSGSDSSTTR 2050 Query: 2312 SGVSGAAVTITDAQAQQARTGQSADQAVASLDASVRTGKDSSNSLSKSWDGNQLREDVEA 2371 SG+S A + ITD AQQA+TG++A+Q +AS++A V + +D+S ++K+W+G +L+ DVEA Sbjct: 2051 SGISQADIKITDDAAQQAKTGKTAEQTIASINADVSSERDTSGKIAKTWNGQELQADVEA 2110 Query: 2372 QAKITQAFGQQASTLIGNYAEEQQKKAADLRKQAADTNDPQQAKELNDQASALERNWGPD 2431 QA+IT+AFGQQ + L G YAE ++K+ AA D QA L +A + Sbjct: 2111 QAEITRAFGQQVAQLAGAYAESKEKELRQAASNAAQNGDQTQALLLGAEADQWKDGGENK 2170 Query: 2432 GTMRVLAHSVVGGLTGGLAGAAGAAAGTLTAPNVASALDK 2471 ++ + V+GGL G AG A A +AP +A A+ + Sbjct: 2171 RALKAITTLVIGGLGGQSAGQLLANA---SAPYLADAIGR 2207 Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust. Identities = 277/655 (42%), Positives = 395/655 (60%), Gaps = 54/655 (8%) Query: 1 MNRQRYKLVFNRHRGQLMAVAEIASSIQHQGRTAG--PSEAMPDLLPSALRFSLLSVALA 58 MN+ Y+++FN+ RG LMAVAE + + R G P A+ L P A R S + +A+ Sbjct: 1 MNQLCYRIIFNKTRGLLMAVAETTRACAGK-RAVGSRPGVALGGL-PMA-RLSWIGLAVL 57 Query: 59 LAMNTV------AHAQILGDRTAPRTQQPTVLVTPNGVPVVNIQTPSTAGVSLNRYRQFD 112 LA + A+AQI+ D APR QQP V+ T NG+P VNIQTPS AGVS N Y QFD Sbjct: 58 LATGALVTTMPRAYAQIIADPNAPRAQQPVVVNTANGIPQVNIQTPSAAGVSRNTYSQFD 117 Query: 113 VGTNGVILNNARSTTSTQLGGYVAGNPWLATGAARVIVNQVNSPNPSYLRGYLEVAGNRA 172 V G ILNN+RS TQLGG+V NP LA G ARVI+N+VNS NPS LRG++EVAG+RA Sbjct: 118 VNRAGAILNNSRSDVQTQLGGWVQRNPNLANGTARVILNEVNSSNPSMLRGFVEVAGDRA 177 Query: 173 QVVVANPAGITCAGCGFINANRATLTTGVPQINNGNLDSYRVASGAVNIEGNGLDASRTD 232 QV++ANP+G+TC GCGFINA+R+TLTTG P INNG+LD Y V G V+I+GNGL+ S++ Sbjct: 178 QVIIANPSGVTCDGCGFINASRSTLTTGTPIINNGSLDGYLVRGGVVSIKGNGLNDSQSS 237 Query: 233 YAEIIARAVQVNAGVWAPELKVSAGLNTVSADHASVQPGVAPSDAAPAVAIDVAQLGGMY 292 + ++IARA ++NAG+W+ ELKV+ G N V+AD+ +V V+ A P IDVAQLGGMY Sbjct: 238 FTDLIARAAKINAGIWSKELKVTVGTNQVNADNTTVT-AVSADPAKPQFGIDVAQLGGMY 296 Query: 293 AGHIYLTSTEHGVGVRNAGTIGAAVGQAVVTADGRLENSGSLSANGLLAVQTTGGVRNSG 352 A I L TE GVGVRNAG IGAA G+ +TA GR+ENSGSL+A L V+ TG G Sbjct: 297 ANKIVLVGTESGVGVRNAGAIGAAAGELTLTAAGRIENSGSLAATASLGVRATG---QGG 353 Query: 353 ELGSKSAASITTTALDNAGSMASSGALTVQASDSVLNTGSIGGEGPVQVSATSIDNRNSL 412 ++ +++ +S+ A+ +QA + N+ +I + V ++A S+ N ++ Sbjct: 354 DI------------VNSGSVASSAAAVKLQADGGINNSNTISAQSGVTLTAASLQNSGAI 401 Query: 413 -GSSASLTMQASAGIRNSGTLQATTDATLNAGTLDNSGTLSARQGSVRVNSSGSSTNSGR 471 ++ ++ + + NSG +QA D +++A + QG N++ +N+G Sbjct: 402 SAATGNVEVDTHGAVNNSGKVQAAGDISISA---------TQPQG----NAAADISNTGN 448 Query: 472 IEAVQTVAVQADG-LTNSGNINAVDALRVQAAQAISNSGTLG--ANGGVELKSATLDNRG 528 IEA + + ADG L+N G+I A ++R Q + N+G++G +N L+ + Sbjct: 449 IEAAGQLGLTADGMLSNDGSITA-QSIRA-GVQGLRNNGSIGTRSNAAFTLQQGLVQGAN 506 Query: 529 TLASSQDALTINTSGQFTNQGQVSAAQSLTLTGAGIDNSAG-SLNATDIHLDSQSQTFSN 587 S+ L + G + N G+V A +LTL+ A I N +G +L A DI L + ++ + Sbjct: 507 GRLSAVSDLNLTMQGDYDNAGRVQ-ANTLTLSAANIGNRSGAALQAADITLTALNRL--D 563 Query: 588 RGGQVSAQRDLQITSGALDNSNGTLAAQGQLTVGSGDLNNDG--GLLQAGTTLKI 640 G++SA R L IT+ ++ NS L L V + L N G LL AG + + Sbjct: 564 NAGEISANRQLNITADSILNSATILGK--DLVVNARTLENTGANALLGAGNGMSL 616 >gi|300310626|ref|YP_003774718.1| filamentous hemagglutinin protein [Herbaspirillum seropedicae SmR1] Length = 2658 Score = 494 bits (1273), Expect = e-140, Method: Compositional matrix adjust. Identities = 386/997 (38%), Positives = 582/997 (58%), Gaps = 62/997 (6%) Query: 1594 QNLGGRI-SGADVQVAAAQDINNIGGTIDARNSLVATAGRDINSASTTVATANAVTSGTN 1652 Q LG I +G D AA ++I G +ID + + AG + ++ AT + VT ++ Sbjct: 1332 QALGSTIEAGGDASFAAGRNIAVRGSSIDVKGNAALLAGGSVEVSAVKTATDSVVTGRSD 1391 Query: 1653 INQNASMSVSEANGSLTAVAGRDINLKASGASAD-NITLVAQR------DVNISTVHETS 1705 + +E + AG+ +++ ASG + +ITL A R +V ++ + S Sbjct: 1392 RYDLNVVGHTENLTTSQIAAGKGLSIVASGQNGSGDITLAASRLSSKEGEVTLNAAGDIS 1451 Query: 1706 QEKLAWDNDNRAE--------VNHDN---AIGSTVQG-KDISVTA-GR---DINAQAAYV 1749 + +NDNR + HD+ A GS ++G K +++ A GR ++ + + Sbjct: 1452 IGAMQKNNDNRIDERGGKAWMKTHDSSSVAAGSLIEGEKGVNLIATGRSDAKVSVAGSDI 1511 Query: 1750 NAEGSLAANAGNNVNIGTDVSTASARDQHKKTDAGGVLSSRTVTTDDSSSERVNQGTTLS 1809 + G++A A +V + + ++S Q +++ G LS + D + + G+TLS Sbjct: 1512 YSNGTIAIQAKGDVTV-AETRSSSDEWQQAHSESRGFLSRSSSDRTDQVRQDMANGSTLS 1570 Query: 1810 GNTVVVRAGKDINVTGSNVVATQGVGMAAGNDVNIVAAVDSSTKNNFRKETTSGVMGAGF 1869 GN VV+ AG++I V GS VV+T+ + A NDV+I + + +++++++ SG+MGAGF Sbjct: 1571 GNKVVIDAGRNIAVRGSEVVSTELTSLRAANDVSITTTQNFTEQSHYKEDRKSGLMGAGF 1630 Query: 1870 GVTIGTREQSHDGKSQGQTASASTIGSTDGNVSIVAGNRYTQVGSDVMAPKGDIDIAAKS 1929 G++IG++ Q +G T +AST+GS +GNV+I+AGN + Q+GS V+AP+GDI+I AKS Sbjct: 1631 GISIGSQGQMANGNGSSVTNNASTVGSVNGNVNIIAGNAFRQIGSQVVAPQGDINILAKS 1690 Query: 1930 VEIRAAEQASRTETEDKYKQSGLTVAVTSPVISAMQTVDQMVESSGKTKNGRVKALAAAT 1989 V+I AA AS E+K+KQSGLT+A+ SPVIS +QT Q++++ KT + R++ALAAAT Sbjct: 1691 VDIGAAYDASVYTQENKFKQSGLTLAINSPVISVLQTGQQLIQAGQKTPDKRMQALAAAT 1750 Query: 1990 AGMSLYSAAGEMQKAGSAEGGSNIGISATIGSSQNGSRSEQNTVTQRGATVASGGNMSIR 2049 + Y A + + G + I+ ++GSSQ+ ++ Q + G+TVA+GG ++I Sbjct: 1751 LAKNAYDAGAALIDKPTDTSG--VKITLSLGSSQSSNKVTQASSQAVGSTVAAGGAVNIV 1808 Query: 2050 ATGDGANSNITIAGSDINAKGNLALKADNDINLIAAQNSDEQHSTRSSSSWGVGI-TAQI 2108 A+G G S+I + GS I+A G+++L AD++INL+AAQ++ QH +SS +GI A Sbjct: 1809 ASG-GPRSDINVVGSAISAGGDVSLVADHEINLLAAQSAYSQHGNNNSSGASIGIGFAMG 1867 Query: 2109 GSQSKLGITANAAGSRGKSDGKDVSNVMTQVRSGGQIKIDSGRDTNLIGATVSGEQVQAN 2168 GSQ+ + A +RG DG D+ N + + +G Q + SG DTN+ G+TVS + V A Sbjct: 1868 GSQNGFTLELGANRARGNLDGDDLVNKASTISAGNQASLISGGDTNVRGSTVSAKTVAAA 1927 Query: 2169 VGRDLNIASVQDTSTFKSRDQSIGGSATIGY------GSSASISASRSRVDADYASVGQQ 2222 +G DLNI S+QD ST+ S+ S G ++ SS S S S S+ DY SV Q Sbjct: 1928 IGGDLNIESLQDKSTYGSKQSSAGVGLSLCIPPFCYGASSVSGSLSGSKAKGDYQSVVTQ 1987 Query: 2223 AGIMAGNGGFQINVKGNTDLKGAQIASTDQAVEQGRNSLTTGTLTSSDIQNRSQYSAESQ 2282 AGI AG+GGF++ V GNTDLKGA I+ST +A+E G+N L TGTLT SDI N Y A Sbjct: 1988 AGIKAGDGGFRLVVAGNTDLKGAVISSTAKAIEDGKNFLQTGTLTYSDISNHDAYEASGY 2047 Query: 2283 SAS--------------------AGTSGGKPGGGIGIGNASGSETSVTRSGVSGAAVTIT 2322 S S A S PGG G + GS++SVTRSG+SG V IT Sbjct: 2048 SVSGSMSSQLGDQSKAKTEADKAAANSRTGPGGSPGYSDTGGSQSSVTRSGISGGTVIIT 2107 Query: 2323 DAQAQQARTGQSADQAVASLDASVRTGKDSSNSLSKSWDGNQLREDVEAQAKITQAFGQQ 2382 D Q Q+A TGQSA+Q +ASL+ V + KDSS +LSK+WDG LR+ VEA+A+I QAFGQ Sbjct: 2108 DEQGQKAATGQSAEQILASLNRDVDSSKDSSGALSKAWDGEALRQQVEAEAQIRQAFGQT 2167 Query: 2383 ASTLIGNYAEEQQKKAADLRKQAADTNDPQQAKELNDQASALERNWGPDGTMRVLAHSVV 2442 + IG+YA+ +++ + KQA D +QA +L +A+ WG DGT R H+ Sbjct: 2168 VAKSIGDYADTKERDLKNAAKQAEQDGDAEQAAKLRAEAA----RWGEDGTARAAVHAAA 2223 Query: 2443 GGLTGGLAGAAGAAAGTLTAPNVASALDKAGVDSDLAKALTGLSSTLVGAAVGGTAGGAA 2502 G L+GGLAGAA AAA + P++A + K G+ S+L + +++ +GA +GG+AG A Sbjct: 2224 GALSGGLAGAASAAAVSKLMPSLAEQIKKMGLPSELEGVVAAAAASGLGAIIGGSAGAAT 2283 Query: 2503 AYNEVVNNY-LHHAESKRLELLRNKQMFGKC--DADC 2536 A +NN LH +E L L ++ C DADC Sbjct: 2284 AVTVDLNNRQLHQSERALLAKLAKEKAAAVCGQDADC 2320 Score = 301 bits (771), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 248/716 (34%), Positives = 381/716 (53%), Gaps = 79/716 (11%) Query: 48 LRFSLLSVALALAMNTVAHAQILGDRTAPRTQQPTVLVTPNGVPVVNIQTPSTAGVSLNR 107 LR ++ ++ + L + + QI+ D A ++P V T NG P+V I TPS AGVS N+ Sbjct: 19 LRRAMAALMIMLCVVPPGYPQIVADPNAGAGKRPVVDNTANGRPLVQIATPSAAGVSHNQ 78 Query: 108 YRQFDVGTNGVILNNARSTTSTQLGGYVAGNPWLATGAARVIVNQVNSPNPSYLRGYLEV 167 Y QF+VG NG ILNNAR TQ GGYV NP L GAARVI+N+V S +PS LRGY EV Sbjct: 79 YSQFNVGPNGAILNNARDVVLTQQGGYVGANPNLQGGAARVILNEVTSTSPSQLRGYTEV 138 Query: 168 AGNRAQVVVANPAGITCAGCGFINANRATLTTGVPQI-NNGNLDSYRVASGAVNIEGNGL 226 AG RA+V++ANP GI+C GCGFIN +R LTTGVP NG+L+++RV+ GA+ I GL Sbjct: 139 AGQRAEVIIANPNGISCDGCGFINTSRGVLTTGVPLFGGNGSLEAFRVSRGAIQIGSGGL 198 Query: 227 DASRTDYAEIIARAVQVNAGVWAPELKVSAGLNTVSADHASVQPGVAPSDAAPAVAIDVA 286 + + TD ++IAR+VQVN +W L + G N V+ + +A AP + +DVA Sbjct: 199 NGANTDQLDLIARSVQVNGELWGNRLNLVTGANRVNYGDLGLSV-IAGEGNAPTIGVDVA 257 Query: 287 QLGGMYAGHIYLTSTEHGVGVRNAGTIGAAVGQAVVTADGRLENSGSLSANGLLAVQTTG 346 ++GGMYA I L TE+GVGVR+ GT+ A G +++ G++ SG SA+ + +++ Sbjct: 258 RMGGMYAQKIMLVGTENGVGVRSLGTLAAQAGSFTLSSQGQIALSGKTSASDDIVLKSAV 317 Query: 347 GVRNSGELGSKSAASITTTALDNAGSMASSGALTVQASDSVLNTGSIGGEGPVQVSATSI 406 G N G L + A + ++NAG++++ G L + A+ + +TG++ A + Sbjct: 318 GTSNDGVLYAGRNAQLQGGVIENAGTLSAQGNLDITAA-QLRSTGTL---------AAGV 367 Query: 407 DNRNSLGSSASLTMQASAGIRNSGTLQATTDATLNAGTLDNSGTLSARQGSVRVNSSGSS 466 D ++ + +LT+ AS + +G +A D L G +D S SS Sbjct: 368 DQAGNVAQAGNLTVTASGDVLATGVNRAGADLQLVGGKID---------------LSHSS 412 Query: 467 TNSGRIEAVQTVAVQADGLTNSGNINAVDALRVQAAQAISNSGTLGANGGVELKSATLDN 526 +++GR Q A DAL + A + +G L EL AT+ Sbjct: 413 SSAGRKLGAQ----------------ASDALTLGGATVETLAGDL------ELGGATITL 450 Query: 527 RG-TLASSQDALTINTSGQFTNQ-GQVSAAQSLTLTGAGIDNSAGSLNATD-----IHLD 579 G L SS DA IN +N+ G++++A ++ +T A +DNSAG ++A + L Sbjct: 451 DGAKLTSSADA-RINAVAGLSNRGGEITSAGAMNVTAASVDNSAGMISAATGGAGVLSLR 509 Query: 580 SQSQTFSNRGGQVSAQRDLQITSGALDNSNGTLAAQGQLTVGSGDLNNDGG-LLQAGTTL 638 S + + SN G+++A L + + ++ G++ A G T+ LNN+ G L+Q+ L Sbjct: 510 S-AGSISNGQGRIAAGAALNLAAASI-QGQGSVIANGDATLSLQSLNNEAGSLIQSNRDL 567 Query: 639 KIDASGKTVRNSHSGSTRGIQAQGTVDIAAATLVNAGLVSSNSDINLNTATLDNRAGSIG 698 +I SG T G+ ++A G +++ A+ + NA + DI+ TL G I Sbjct: 568 RITTSGAT------GNQGALKAIGALNLTASQIDNA----AGGDISAAATTLQALNGDIN 617 Query: 699 ATGK-----LTVQGNSVTNSGGQLQAKQGVDIQAGSGLVDNSGGLLRSDGTVNVQA 749 GK + N++ N G + G D+ + ++NSG T +VQA Sbjct: 618 NAGKIGGNTIATTSNALNNQGSMI----GGDVTINADRLNNSGAAAAIAATNSVQA 669 Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 360/1290 (27%), Positives = 570/1290 (44%), Gaps = 248/1290 (19%) Query: 528 GTLASSQDALTINTSGQFTNQGQVSAAQSLTLTGAGIDNSAGSLNATDIHLDSQSQTFSN 587 GTLA+ + T+++ GQ G+ SA+ + L +S ++ Sbjct: 282 GTLAAQAGSFTLSSQGQIALSGKTSASDDIVL---------------------KSAVGTS 320 Query: 588 RGGQVSAQRDLQITSGALDNSNGTLAAQGQLTVGSGDLNNDG----GLLQAGTT-----L 638 G + A R+ Q+ G ++N+ GTL+AQG L + + L + G G+ QAG L Sbjct: 321 NDGVLYAGRNAQLQGGVIENA-GTLSAQGNLDITAAQLRSTGTLAAGVDQAGNVAQAGNL 379 Query: 639 KIDASGKTVRNSHSGSTRGIQ-AQGTVDIAAATLVNAG--LVSSNSD-INLNTATLDNRA 694 + ASG + + + +Q G +D++ ++ +AG L + SD + L AT++ A Sbjct: 380 TVTASGDVLATGVNRAGADLQLVGGKIDLSHSS-SSAGRKLGAQASDALTLGGATVETLA 438 Query: 695 GSIGATGKLTVQGNSVTNSGGQLQAKQGVDIQAGSGLVDNSGGLLRSDGTVNVQAGSVRN 754 G L + G ++T G +L + I A +GL N GG + S G +NV A SV Sbjct: 439 G------DLELGGATITLDGAKLTSSADARINAVAGL-SNRGGEITSAGAMNVTAASV-- 489 Query: 755 DNTQGQDQGVEGATVNVAATDISNRQGAVRGDAITLTASGRIDNGNGLISATNSAVLTDA 814 DN+ G G ++L ++G I NG G I+A + L A Sbjct: 490 DNSAGMISAATGGA-----------------GVLSLRSAGSISNGQGRIAAGAALNLAAA 532 Query: 815 NPSTRTLAIDNSNGTIIAGRQTTLLAYSFTGSGRVLSQKDLRMDLVASILHTGQIGATAE 874 + + I N + T+ +L + + + S +DLR Sbjct: 533 SIQGQGSVIANGDATL------SLQSLNNEAGSLIQSNRDLR------------------ 568 Query: 875 LDLRTAGTFTNAGSVGAGGTLTLTAATIDNQASGSLVGNTLRLKAT--DVHTFINRGLID 932 + T+G N G++ A G L LTA+ IDN A G + L+A D++ N G I Sbjct: 569 --ITTSGATGNQGALKAIGALNLTASQIDNAAGGDISAAATTLQALNGDIN---NAGKIG 623 Query: 933 GVNTIIESSTVNNLGTGRIYGDNIAIGADVLNNQAETVDGVTSAPVIA-ARNRLDIGAGV 991 G S+ +NN G+ + G ++ I AD LNN + V A R+ L Sbjct: 624 GNTIATTSNALNNQGS--MIGGDVTINADRLNNSGAAAAIAATNSVQAFVRSAL------ 675 Query: 992 INNSEHGLIYSVGDMVIGGALDANKKVVGSARE----VNNSSATINADGNLSIAAGSINN 1047 N ++ LIYS+G +VI A DA + G + NSSATI A G+L+++A +I N Sbjct: 676 -TNQDNALIYSLGKLVI--AADATQSAAGDYLHRTGTLTNSSATIEAGGDLAVSADTIVN 732 Query: 1048 NNAHLETTDQTGPGKRIINFRLNGSSQLLDSNSAW-LYNRGSGEILNAANWRAMGDEDNY 1106 + L +I + + D +W YN WR+ G Sbjct: 733 KRSTL-----------VI------ARDIFDGTESWQKYNY---------YWRSWGSG--- 763 Query: 1107 RLLLPSAA--YPAERYGPPFDYSRGARGDNAVAIAYVPPYSQGAMGDADAVYIPPVINYT 1164 + P +A A PF+ A A+ Y G++ D ++ + Sbjct: 764 -MSGPDSAGLMAAVTRTLPFND----------ASAFGSRY--GSILQLDLSSNRALVQFQ 810 Query: 1165 ATDRIWAVMGVTPPQDPGPGPGAEPRPGEMCYDSCYPVPVDPEVYAAWKAA--NDVWKPK 1222 ++++W V Q+ G+ C D P V+ + + D + P Sbjct: 811 GSNQLW-VSYKAIKQNADGSYDMTFYEGKNC-DGSTLCPYQQMVWREYTGSRVQDQFDPS 868 Query: 1223 YDVYIAALLVLNDKIAAFNNNVNSRSYREWTIYDGTEQITRTVVTKSDPGMITSGGNMNL 1282 A L + N ++ +RE + Y+G+ + SD + + G + + Sbjct: 869 RYTSPAELKGIG------TNGESAYDFRERS-YNGSN-YHDAITAMSDAAKLNASGRITI 920 Query: 1283 AVGALNNYASQVIAGGTLAGDSVNGTA-----INNTGPLGMQRVVSTGSAVYTYIKSHSF 1337 AL N AS +IAGG L + NG+A +NN G + R + G+AV Y Sbjct: 921 NTAALTNDASDIIAGGALTINGANGSAASGGVVNNIG-YSINRT-AIGTAVDHY------ 972 Query: 1338 SADDRRYDGVPYQSQDI--VTNFQ-LDVSPTSGAGPNRANSVRA--VPASVSGAAGASAG 1392 DR Y + ++ VT Q +D + S N+A S+ A + + GAA Sbjct: 973 ---DRHVGHHTYTTLNLTEVTALQTIDANIQS----NQAVSISAQNLNNTTVGAATVPTR 1025 Query: 1393 AASIRIANLDLTLPNNALYRINAGPAQRYLVQTDPQFVGTRNWLSSDFMLNQLGLQSGVR 1452 A + AN+ TLP L+ + P QRYLV+TD +F + +L SD+ML +L + + Sbjct: 1026 AGGVGHANI--TLPAGGLFTVRPEPGQRYLVETDRRFTDYKTFLGSDYMLGRLTMDPSMT 1083 Query: 1453 Q--LGDGFYEQQLVQRQIQQITGQRYLAGYSSNEAQYQALMNAGLQVAQAQRYTLGVALT 1510 Q LGDGFYEQ+L+ QI Q+TG+++L GY++ EAQY+ALM++G+ A + + T G+AL+ Sbjct: 1084 QKRLGDGFYEQKLINDQIAQLTGKKFLDGYTNAEAQYKALMDSGVASAASFKLTPGIALS 1143 Query: 1511 DAQVAALKTDIVWLVKQTVTLADGSTQEVLVPQVYV-HASNVEVTGQGTLIAGNDVAFQA 1569 Q+AAL +DIVW+V VTLADGS Q LVP VY+ H + + G LI G DV Sbjct: 1144 ADQMAALTSDIVWMVDTEVTLADGSRQHALVPTVYLAHGGSATLQASGALIGGRDVTL-- 1201 Query: 1570 AQDIVNSGGTIAARKGVSLAGANLQNLGGRISGADVQVAAAQDINNIGGTIDARNSLVAT 1629 A D VN+ G + A +++A ++ N GG + G V V A + + NIG Sbjct: 1202 AADTVNNSGIVRAEDKLAVAARDINNTGGELRGDKVDVLATETL-NIG------------ 1248 Query: 1630 AGRDINSASTTVATANAVTSGTNINQNASMSVSEANGSLTAVAGRDINLKASGASADN-I 1688 T N + S++ G ++A DIN+ + AD+ + Sbjct: 1249 ------------------TDFQNYGRQGSVT-----GRQVSLAANDINIIGAKIKADDTL 1285 Query: 1689 TLVAQRDVNISTVHETSQEKLAWDNDNRAEVNH------------DNAIGSTVQ-GKDIS 1735 L AQ ++ I+ KL W E NH A+GST++ G D S Sbjct: 1286 KLAAQNNLTIAAATAQHDVKLTWSGAGEREENHGMMRNGGVTAQLQQALGSTIEAGGDAS 1345 Query: 1736 VTAGRDINAQAAYVNAEGSLAANAGNNVNI 1765 AGR+I + + ++ +G+ A AG +V + Sbjct: 1346 FAAGRNIAVRGSSIDVKGNAALLAGGSVEV 1375 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.309 0.126 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 8,140,074 Number of extensions: 342390 Number of successful extensions: 1491 Number of sequences better than 1.0e-08: 3 Number of HSP's gapped: 1251 Number of HSP's successfully gapped: 21 Length of query: 2897 Length of database: 1,619,870 Length adjustment: 102 Effective length of query: 2795 Effective length of database: 1,136,900 Effective search space: 3177635500 Effective search space used: 3177635500 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 139 (58.2 bits)