BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0091.p
         (624 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309424|ref|YP_003773516.1| membrane-associated phospholipi...   696   0.0  

>gi|300309424|ref|YP_003773516.1| membrane-associated phospholipid
           phosphatase [Herbaspirillum seropedicae SmR1]
          Length = 479

 Score =  696 bits (1795), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/451 (83%), Positives = 398/451 (88%)

Query: 17  LPWKRGVAWLLLLGPLFFLSYGLANHAAAARANVPSFFYAWESHIPFLPWTIVPYWSIDL 76
           LPWKRGVAWLLLLGPLFFLSYG ANHAAAARA+VPSFFY WE HIPFLPWTI+PYWSIDL
Sbjct: 23  LPWKRGVAWLLLLGPLFFLSYGFANHAAAARASVPSFFYGWERHIPFLPWTILPYWSIDL 82

Query: 77  LYGFSFLCCRTPRQTDRHALRLLSAQLIAVACFLAFPLRFAFVRPPSEGLFGALFASLAA 136
           LYGFSFLCCRT R+TDRHALRLL+ Q+IAVACFLAFPLRFAF RP ++GLFGALFASL A
Sbjct: 83  LYGFSFLCCRTARETDRHALRLLTTQVIAVACFLAFPLRFAFERPATDGLFGALFASLTA 142

Query: 137 FDLPYNQAPSLHIALLVLIWVQFARLPSGWLVKLFIHGWALLIGLSVLTTWQHHFIDIPT 196
           FDLPYNQAPSLHIALLVLIWVQFARL + W  +  IHGWALLIGLSVLTTWQHHFIDIPT
Sbjct: 143 FDLPYNQAPSLHIALLVLIWVQFARLRASWPWRWLIHGWALLIGLSVLTTWQHHFIDIPT 202

Query: 197 GAMLGLFCLWLWPDQGASPLRRDGLGSTRRLRLALAYGLGALLALGLAVNVRPLAAPLGW 256
           GAMLGLFCLWLWPD+G +PL+RDG GS+RR RLALAYGLGA +ALGLA  VRPLAA LGW
Sbjct: 203 GAMLGLFCLWLWPDEGRTPLQRDGQGSSRRTRLALAYGLGAAVALGLAYGVRPLAALLGW 262

Query: 257 LALSLAIVAWNYAWAGAGGFQKIDGKRSLAATWLLAPYTWGAARNARLWTRRHPQPDAIA 316
            AL+LAIVAWNYA+AG  GFQK DG+RSLAA WLLAP+  GA  NARLWTRRHPQPDAI 
Sbjct: 263 SALALAIVAWNYAYAGTAGFQKRDGRRSLAAAWLLAPHALGAWINARLWTRRHPQPDAIT 322

Query: 317 DDVWLGRLPTSIEMCTGRFAALCDLCAELPAPRGYWRYAGHAWLDLVAPDADQLLAAARS 376
           DDVWLG LP    M  GRFAALCDL AELPAPRG+WRYA H WLDLVAP+ADQLLAAARS
Sbjct: 323 DDVWLGPLPGKAGMSAGRFAALCDLSAELPAPRGHWRYASHPWLDLVAPEADQLLAAARS 382

Query: 377 IESLRGRGPVLVACALGYSRSAAAVATWLCLSGRCADMTCALALLAERRPTVVINDALRQ 436
           IESLRG GPVLVACALGYSRSA AVA WLCLS RC DM  ALALLAERRP VVINDALR+
Sbjct: 383 IESLRGHGPVLVACALGYSRSAGAVAAWLCLSRRCPDMAGALALLAERRPAVVINDALRE 442

Query: 437 RLQEVEQRLLKENHMPDLRQGSCGDAANDAA 467
           RL EVEQRLLKEN MP+LRQG  GDAANDAA
Sbjct: 443 RLLEVEQRLLKENPMPELRQGPGGDAANDAA 473


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.327    0.139    0.463 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,870,536
Number of extensions: 76853
Number of successful extensions: 331
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 331
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1,619,870
Length adjustment: 91
Effective length of query: 533
Effective length of database: 1,188,985
Effective search space: 633729005
Effective search space used: 633729005
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 133 (55.8 bits)