LOCUS NODE_50578-0.187 6340 bp DNA linear UNK DEFINITION Contig NODE_50578-0.187 from Herbaspirillum hiltneri N3 ACCESSION unknown FEATURES Location/Qualifiers source 1..6340 /mol_type="genomic DNA" /db_xref="taxon: 341045" /genome_md5="" /project="leonardo_341045" /genome_id="341045.3" /organism="Herbaspirillum hiltneri N3" CDS complement(192..971) /db_xref="GO:0009014" /translation="MSSSLQQSVLSFLDAEHAAQTRFLQELVRVPSDNPSGDCAAHGA RAQALLEQLGFDVEVHVVQEELVKANGMISAANLIVRKRFGSGGPTIALNAHGDVVPP GLGWSKDPYGGEIVQDAEHGPVMYGRGVAVSKSDFATYTWALLALIAAEKQGAVLNGA IELQFTYDEEAGGDIGPRWILEQGLSKPDYAVSAGFAYGITSAHNGCLHLEVTVKGKQ AHAAMPHTGIDAIEAATGILQALYAYRTELAKKKKKXRRAR" /product="N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)" /EC_number="3.5.1.18" CDS 1223..1954 /db_xref="GO:0003677" /db_xref="GO:0003700" /db_xref="GO:0005622" /db_xref="GO:0006813" /db_xref="GO:0008324" /db_xref="GO:0009058" /db_xref="GO:0030528" /db_xref="GO:0045449" /translation="MTKPSKTSRSPLASHSAVRDHSPAVEERLYQDIYDAIMEHRLPP RTKLTEQVLCQIYDTARHTVRKVLSRLATEGMVDLEANRGAFIASPSHAEVKDMFELR NIIEYAVLDKVGREASTREIAGLRKMVEEERNSYLTGDRPRWIRLSAQFHLALAELTG NALLVDTLRKLVSRTTLMIAKTEAPGHNACSFDEHDTVLAALENGDITLAQEHMAHHL HLCEDRVRPSDDDHFDLRSVLGKSS" /product="Transcriptional regulator, GntR family" CDS 1984..2142 /translation="MQRIPAAANYPRDLIGYGRNVPHANWPGQKPPPPXPRPVRGVAA LPRLRAVA" /product="hypothetical protein" CDS complement(2285..2467) /translation="MPVPGKGILLDSKDGVLQHAQQIYQQAVVQKAMPLGNMTNITDE ERALLGKWFEAGAKGE" /product="Probable transmembrane protein" CDS complement(2508..3089) /translation="MEAYIFDWLNLLLRWLHVITAIAWIGSSFYFVWLDNSLTRPDDP ELLGKGVGGELWAVHGGGFYNPQKYLLAPKTLPQNLHWFFWESYSTWLSGFALFSVLY LFNAGTFLVDRHVLDMTATTAVCAALAYLVAGWLVYDAICRLFGDKPGGDRMVGVLVT LYVVAAVWVACHVFSGXKSPCAGGVVRPGAASD" /product="conserved hypothetical membrane protein, paralogue of Y20848" CDS complement(3226..4041) /translation="MCLTTAALAVSAMSSMSANAADWADNSIGIRYGTKFAEPFNSQD ISKKIVNFTHASGYKYGTNFLNVDLLMSDSKDNESQEAYIVYRHTLDIGKVAGKDLSF GPARGFGLTAGFDWNTKNDPGYSSRKRMIVAGPTIMMDVPGFLNISLLALWESNQPLS NGVRMSSRYSYDTHPMLNAAWGIPFGTSGFAFEGYVNYIAAKGKNEFGGGTAPELNFD GQIMYDVGMPMGMGKNTFRVGLEYQYWRNKFGNPHNVPGSLAKTPMIRAEYHF" /product="hypothetical protein" CDS 4087..4272 /translation="MKNKSAXQRPTRALSSPSPPSGVLGTVNAFQEDIVCKNRTTKPG RIGDIAVTSPAPGQPIN" /product="hypothetical protein" CDS 4292..5323 /translation="MHANKLFKFTAAVLLSATCSASFAQETKIKFQLDWRFEGPSALF LVAKSKGYFAQEKLDVVIDAGSGSGNAVNRVASGTYDMGFADMAALMEFTANNPASPG KPMAVMMVYNDTPAAIFSLKKTGIRTPADLVGKKLGSPVFDAGRRGYPIFAKANGLDA SKANWISMDPPLRETMLARGDVDAITGFYFTSLLNLNARGIKDSDINVMMYPDYGVKL YGNAIIANESLMKTNPEALKGFLRAFAKATKDVLADPEGAIKVLKERDGLIDAKLELR RLKLAISSAIATPHAKAEGYGQVSLPRLTLMASQVSDAYATKTRVNAEKIWTPAYLPS KELLNVFGK" /product="Hydroxymethylpyrimidine ABC transporter, substrate-binding component" CDS 5320..5556 /translation="MTLQADALEATMTSSNTEAETDTFVDFRRVFLSYDGSDEFAVED ISLQTRQGEFISIVGPSGCGKSTAARSSQGXRLS" /product="ABC transporter-related protein" CDS 5553..5879 /db_xref="GO:0005524" /db_xref="GO:0016887" /translation="MKLATGLKRPTRGSIAIAGADVTGPLKFVGMAFQAPTLLPWRTT LDNVLLPLEIVEPYRSDFKKNKAQYAERALKLLKTVGLDGYADKFPWELSGGMQQRAS XKNLLR" /product="Hydroxymethylpyrimidine ABC transporter, ATPase component" CDS 5963..6334 /db_xref="GO:0005215" /db_xref="GO:0006810" /db_xref="GO:0016020" /translation="MSEFIFPSPMAIIEAMIEFAGPIAHHALSTFWVTMVGFAIAVAV GVSLGFLIGSSPLLYAAAYPLMTAFNALPKAAFVPARHSRPSAGTRCCSPARSIPWPG RSRWCSCCRPIAPKSRCTTCQ" /product="Hydroxymethylpyrimidine ABC transporter, transmembrane component" BASE COUNT 1288 a 2016 c 1802 g 1227 t 7 others ORIGIN 1 gcctgcatcc cacaaaaacc cgtagcaagt acgcttcttg catgggaggg aaagtcgtcg 61 tcaaaatgca tgggcaatat ccgatgaaaa atacacaaat gattgtcaac aatcgctgtc 121 gcagcgtcgc tgcggcaatg gcgcccgcaa agggcgacag aacggcagct tccccccccc 181 cccctattga tctaacgcgc gcggcgnttt tttttttttt ttttcgccag ctcggtacga 241 taggcgtaca gcgcctgcag gatgccggtt gcggcttcga tggcgtcgat gccggtatgc 301 ggcatggcgg cgtgcgcctg cttgcctttg actgtgactt ccagatgcag gcagccgtta 361 tgcgcggacg tgatgccata ggcgaagccg gccgagacgg cgtagtcggg cttgctcagt 421 ccttgctcga ggatccatcg gggaccgatg tcgccgcccg cttcttcgtc gtaagtgaat 481 tgcagttcga tggcgccgtt gaggaccgca ccttgtttct cggcggcgat cagcgccagc 541 agcgcccagg tgtaggtagc gaaatcggac ttcgacacgg ccacgccacg accgtacatg 601 acagggccgt gctcggcgtc ctggacgatt tcaccgccgt agggatcctt gctccagccg 661 aggccgggcg gcaccacatc gccgtgggcg ttgagcgcga tggtcgggcc gccgctgccg 721 aagcgcttgc gcacgatcag attggcggcc gatatcatgc cgttggcctt gaccagttcc 781 tcctgcacta cgtgcacttc cacatcgaaa cccaattgct ccagcaaggc ctgggcgcgt 841 gcgccgtgtg cggcgcaatc gccggacgga ttgtcggacg gcacccgtac cagttcctgc 901 aggaaacgag tttgcgcggc gtgttcggcg tcgaggaaag agagtacgga ttgttgcaat 961 gatgacgaca tgagatggcc tgtaaaagag gactgaagac tgctgaaaaa ctgcatacgt 1021 gattgtaaaa gacttgccct gcacgtgttt gctcctcgtt cgccgcctgc atcccacaaa 1081 aacccccccc ccccngaaag ctcaccaaat tgttgcagat tgctttttcc attgttgaca 1141 atgccggccg ccggtatgac tcctgcatcg tcgcaaacaa gctttcgctt ccgtccaacc 1201 cttgatgccg tcccttcccg ccatgaccaa accaagcaag acatcccgct cgcccctggc 1261 ttcgcattcc gccgtccgcg atcattcgcc ggccgtcgag gaacgtcttt accaggacat 1321 ctatgacgcg atcatggaac atcgcctgcc gccgcgcacc aagctcactg agcaggtcct 1381 gtgccagatt tacgataccg cccggcacac cgtgcgcaag gtgctctcgc gcctggccac 1441 cgagggcatg gtcgacctcg aagccaatcg cggcgccttc atcgccagcc cctcgcacgc 1501 cgaggtcaag gacatgttcg agctgcgcaa catcatcgaa tacgcggtgc tcgacaaagt 1561 cggccgcgaa gccagcacgc gcgagatcgc cggcctgcgc aagatggtcg aggaagaacg 1621 caactcctac ctgaccggcg accggccgcg ctggatccgt ctgtccgctc agttccactt 1681 ggcgctggcc gagctgaccg gtaatgcgct gctggtcgac acgctgcgca agctggtgtc 1741 gcgcaccacg ctgatgatcg ccaagaccga agcgccggga cacaatgcct gctccttcga 1801 tgaacacgac accgtgctgg cggcgctcga aaacggcgac atcacgctgg cgcaggaaca 1861 catggcacac catttgcact tgtgcgaaga ccgggtccgc cccagcgacg acgatcactt 1921 cgatttgcga tcggtactgg gaaagagttc ctgaacaccg tcttcctcat ttcaaaagaa 1981 cacatgcaac gcataccagc agcagccaac tacccgcgcg acctgatcgg ctacggccgc 2041 aacgttcctc acgccaactg gccgggccaa aaaccccccc cccccctncc ccggccggtt 2101 cgcggcgttg cagcgcttcc tcgactacgt gcagtcgcat gaacgcgtat ggatctgccg 2161 ccgtatcgac atcgcgaacc attggcgcga gcagcatccc tacgccggct gaaccgtctg 2221 tccaaagacg aaaggctgaa catcgtgttc agcctttttt attatccgga tgtccgccgg 2281 ctggtcattc gcctttggcg cctgcttcga accacttgcc cagcaaagcc cgttcttcgt 2341 cggtgatatt ggtcatgttc cccagcggca tggccttctg caccacggct tgctggtaga 2401 tctgctgcgc atgctgcagt acgccgtcct tgctgtcgag caggatgccc ttgcccggca 2461 ccggcattag cgtcggcttg gccgcatggc actggatgca gcgcgtttca atcacttgct 2521 gcacctgggc gaacgacacc gccggcgcag ggggatttnc ggcctgaaaa cacatggcac 2581 gccacccaga ccgccgcaac gacatagagc gtgaccagca cgcccaccat gcggtcgccg 2641 cccggcttgt cgccgaacag acggcagatg gcgtcgtaca ccagccagcc tgcgaccagg 2701 taagccagcg ctgcacacac cgcggtggtc gcggtcatgt cgagcacgtg cctgtcgacc 2761 aggaaggtgc cggcgttgaa caggtacagg accgagaaca gcgcaaagcc cgacagccag 2821 gtgctgtatg actcccagaa aaaccagtgc aggttttgcg gcagggtctt cggcgccagc 2881 agatatttct gcggattgta gaaacccccg ccgtgcacgg cccacagttc gccgccgacg 2941 cccttgccaa gcagttctgg atcgtcgggc cgggtcaggc tgttgtcgag ccagacaaag 3001 tagaacgagg atccgatcca ggcaatcgcc gtgatgacat gcagccagcg cagcaagaga 3061 ttgagccagt cgaaaatgta tgcttccatt gcgccccgcg tggtgagtcg aaccgaaaat 3121 tgtttatacc atcagtcgcc gataaaaaaa tgccggatca aaagacccgg caccgaagga 3181 cgtggaccgt agggcatgtt cacaccggca ggtccgcaga aatacttaga aatggtattc 3241 ggcgcggatc atcggcgtct tcgccagcga acccggcacg ttgtgcgggt tgccgaactt 3301 gttgcgccag tattgatatt ccaggccgac acggaaggtg ttcttgccca tgcccatagg 3361 catgccgacg tcgtacatga tctggccgtc gaagttcagc tcaggcgcgg tgccgccgcc 3421 gaactcgttc tttcccttgg cggcgatgta gttcacatag ccttcgaacg cgaagccgct 3481 ggtgccgaac gggatgcccc aggctgcatt caacatcggg tgcgtgtcgt aggagtagcg 3541 gctggacatg cgaacgccgt tgctcaatgg ctgattgctt tcccacaggg ccagcaggct 3601 gatgttcagg aagcccggca cgtccatcat gatagtagga cccgcaacga tcatgcgctt 3661 gcgcgagctg tagccggggt cattcttggt gttccagtca aagcctgcag tcaggccaaa 3721 gccgcgcgca gggccgaaag agaggtcctt gccggctacc ttgccgatat ccagtgtatg 3781 acgatagacg atataggctt cttgcgattc gttgtctttg ctatccgaca tcagcaaatc 3841 gacgttcaga aagttggtgc cgtatttgta accgctggcg tgcgtgaagt tgacgatctt 3901 cttggaaata tcctgcgagt tgaacggctc ggcaaacttg gtgccgtagc ggataccgat 3961 cgaattgtcc gcccaatccg cagcattggc cgacatgctg ctcatggccg aaacagccag 4021 cgctgcggta gtcaagcaca tccccattgc actcttcttc atacgttttc tcccttttgc 4081 gtttcattga aaaataaatc cgccgnccaa aggccgacgc gagcgctgtc ttcgccgtcg 4141 ccgccgtccg gcgttcttgg cacagtaaat gcttttcaag aggacatcgt ttgtaaaaac 4201 cggacaacaa aaccgggccg cattggcgac attgccgtca cgtcgcctgc acccggccaa 4261 ccgatcaact gaattcaacg gaaagcccat catgcacgcc aacaagctct tcaagttcac 4321 cgccgccgtg ctgcttagcg ccacctgctc cgcctccttt gcgcaggaaa ccaaaatcaa 4381 gttccagctc gactggcgct ttgaaggtcc gtccgcattg ttcctggtgg ccaagtccaa 4441 gggctatttc gcgcaggaga aactggacgt cgtcatcgac gccggcagcg gctccggcaa 4501 cgccgtcaat cgcgtggcgt caggcacgta cgacatgggc tttgccgaca tggcggcgct 4561 gatggaattc actgcgaaca atcctgcctc gccgggcaag ccgatggccg tgatgatggt 4621 ctataacgac acgccggcag caatcttctc gctcaagaag accggcatca ggacaccggc 4681 cgatctggtc ggcaagaagc tcggctcgcc ggtgtttgac gccggccgcc gcggctatcc 4741 gatcttcgcc aaggccaacg gcctggatgc ctccaaagcc aactggatca gcatggatcc 4801 gccgctgcgc gaaaccatgc tggcgcgcgg cgacgtcgac gccatcaccg gcttctactt 4861 cacctcgctg ctgaacctga acgcacgcgg catcaaggat tcagacatca acgtgatgat 4921 gtatcccgac tatggcgtca agctgtacgg caacgccatc atcgccaacg aaagcctgat 4981 gaagaccaat ccggaggcgc tcaagggctt cctgcgcgcc ttcgccaagg cgaccaagga 5041 tgtgctggcc gatcccgaag gcgccatcaa ggtgctcaag gaacgcgacg gcctgatcga 5101 cgccaagctg gaactgcgcc gcctcaagct ggccatctcc agcgccatcg ccacgccgca 5161 cgccaaggcc gaaggctacg gccaggtatc cctgccgcgc ctgacgctga tggcctcgca 5221 agtgtcggac gcctacgcca ccaagacgcg tgtcaatgcg gaaaagatct ggaccccggc 5281 ttacctgccg tccaaggaac tgctgaatgt gttcgggaaa tgacattgca agctgacgcc 5341 ctcgaagcaa ccatgacttc ctcgaacact gaggcggaga cggacacctt cgtcgatttc 5401 cgccgcgtct tcctttccta cgacggctcc gacgaatttg cggtcgaaga catttcgctg 5461 caaaccaggc agggagagtt catctccatc gtcggtccgt ccggctgcgg aaagtcgacc 5521 gctgcccgga gttcgcaggg tgntcgactt tcatgaagct ggcgacgggc ctcaagcgtc 5581 ccacacgcgg cagtatcgcc atcgccggcg cggacgtgac cgggccgctc aaattcgtcg 5641 gcatggcctt ccaggcgccg acactgctgc cgtggcgcac cacgctcgac aatgtgctgc 5701 tgccgctgga aattgtcgag ccgtatcgca gcgacttcaa gaagaacaag gcgcagtacg 5761 ccgagcgtgc gctcaaattg ctcaagaccg tcggcctcga cggctatgcc gacaagtttc 5821 cgtgggaact gtcgggcggc atgcagcaac gcgcctcgan aaaaaacctt cttcgctgaa 5881 ccgggccgca cgtacgctgg cgccgtggat actgctgctg gcgatcctcg tcatctggca 5941 gatcatctgc agcgcgctgg acgtgtccga gttcatcttc ccaagtccga tggcgatcat 6001 cgaggccatg atcgaattcg ccggcccgat tgcgcaccac gcgctgtcga ccttctgggt 6061 caccatggtg ggcttcgcca tcgccgtggc ggtgggcgtg tcgctgggct tcctgatcgg 6121 ttcgtcgccg ctgctctatg ccgcagccta tccgctgatg acggcgttca atgcgctgcc 6181 caaggccgct ttcgtaccgg caaggcatag tcgaccgtca gcaggaacca ggtgttgtag 6241 ccctgctcgg tcaatacctt ggccaggccg tagccgttgg tgtagctgtt gtagacccat 6301 tgcaccgaag tcgcggtgca cgacttgcca ataaccccta //