LOCUS hautotrophicum_S2_L001_R1_001_2_(paired)_contig_96 8081 bp DNA linear UNK DEFINITION Contig hautotrophicum_S2_L001_R1_001_2_(paired)_contig_96 from Herbaspirillum autotrophicum IAM14942 ACCESSION unknown FEATURES Location/Qualifiers source 1..8081 /mol_type="genomic DNA" /db_xref="taxon: 180195" /genome_md5="" /project="leonardo_180195" /genome_id="180195.4" /organism="Herbaspirillum autotrophicum IAM14942" CDS 382..1026 /translation="MKNTVLLLPIGVALVISGAAHAARSSSVAVNGVSRPPPCNLTLG DDGIADYGMIPAASLIRGNYTDLPYKNVALRIACPRKTRVGLSVTDNRPDSLIVAFGE ARYNFGLGKAGGANIGGYRLFLEQSGVTTDGRPANQIFSVIGSRNWNKTGPGGQLGKD RLFSWAAPNTSVPAMFQTISGSILIIPTLNKPENLPMMQQIKLDGAVTLEIMYL" /product="Beta-fimbriae probable major subunit" CDS complement(1189..3492) /db_xref="GO:0004473" /translation="MITKKEEVRQQLRQAALEYHEFPTPGKISVTPTKLLTNQRDLSL AYSPGVAAACEEIVADPANAFKYTARGNLVAVISNGTAVLGLGNIGPLASKPVMEGKG VLFKKFAGIDVFDIEINETDPDKLCDIIASLEPTFGGINLEDIKAPECFYIERKLRDR MKIPVFHDDQHGTAIIVGSAILNGLKVVNKSIKDCKLVVSGAGAAALACLDLIVDLGF PIENIYVTDLAGVVYKGRVELMDPDKERFARETDARTLADVIPGADIFLGVSAGGVLK PEMVKQMAARPLILALANPTPEILPEEVMAVRDDAIIATGRSDYPNQVNNVLCFPYIF RGALDSGATTITREMEIAAVHAIAELAQAEQSDIVASTYGIANLSFGPEYIIPKPFDP RLMIKIAIAVARAAETSGVAARPIKDMNAYAEKLEQFVYHSGTFMRPIFQAAKKAPDD RKRIVYAEGEEERVLRAVQVVVDEGLAKPILVGRPEVLEQRIKKFGLRLRQDVDFEII NPNFDARYRDYWQSFLELTKRKGVTEQYAKLEMRRRHTLIGSMAIHKGDADGMICGTY GTTQLHLHYIEQVLGKREGVNVFAAMNALILPTRQLVLVDTHVNENPTAEELAEITIL AAEEMRRFGLLPRAALLSHSNFGSSNSESARKMRAALALVQKLAPELEIDGEMHGDTA LDRKLLTKVMPDSPLKGEANLLVMPNIDAANIAYNLLKTASGNGVAIGPILLGCAKPV HILTPSATVRRIVNMTALCVMDALSER" /product="NADP-dependent malic enzyme (EC 1.1.1.40)" /EC_number="1.1.1.40" CDS 3730..4695 /db_xref="GO:0009030" /translation="MLSEFELIARYFTRPSAPDSRTALGVGDDCALLTPAPGMQLAVS TDMLVAGRHFFPEVDPLTLGHKCLAVNLSDLAAMGAHPIAFTLALALPEAREEWLAPF AQGMLTLADEHGCELVGGDTTKGPLTISITVFGEIPFNQALRRDAAKAGDDIWVSGTL GDARLALAAYRQELVLDAEAHQKAALRMHQPYPRLALGMALRGIAHAAIDISDGLAGD LGHILHRSGVGGQLDVDALPAGAVLQQQAPDLRRRFALSGGDDYELCFTAPAARRKQV QAAADHAATAVTRIGQIEAHSGLRLVTGDGQPLALTPTSFDHFTS" /product="Thiamine-monophosphate kinase (EC 2.7.4.16)" /EC_number="2.7.4.16" CDS 4692..5219 /db_xref="GO:0008962" /translation="MTTTIEQGRKAFITKPNSRFMLAHPAHWLAQGFGSGLSPIMPGT SGTLFAWLAYAVMSSRWPDLFTPANWLIIIAVGFVAGIWACHRTGRDLGAPDHGSMVW DEIIAFWLVLVLVTPASLMTQFWAFIAFRFFDMVKPAPIAYFDRRFKGGFGVMWDDIV AAFYTLLVFAFWRSM" /product="Phosphatidylglycerophosphatase A (EC 3.1.3.27)" /EC_number="3.1.3.27" CDS 5374..5862 /translation="MDTAIDLAARVGQVLKSRNLLLTTAESCTGGGVAQAITEIAGSS EWFDCGFVTYSNASKNELLDISEALIAQHGAVSEEIAAAMAEGAIANSSSDVAVSTTG IAGPGGAVPGKPVGTICFGWKVGDHTHTERLVFSGDRHAIREQTVVHALQGLLKFIGP AN" /product="C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS" CDS complement(5921..6685) /db_xref="GO:0004590" /translation="MGLDPDISKFPAQWKGKPEAIVGFCKGIIDATADVACSFKPQIA YFAALRAEDQLEEICAYIREKYPAIPVVLDAKRGDIGATAEQYAREAFERYGADAVTV SPYMGFDSVAPYLEWKDRGAIVLCRTSNAGGSDLQFLKVDGVPLYQHVARLVADKWNT NGQCGLVVGATFPEELAQVRNIIGDMPLLVPGVGAQGGDVAATVKAGKTAQGGGMMIN SSRAILYAQAQGEENYAAAARRVALETRDAINAFRR" /product="Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)" /EC_number="4.1.1.23" CDS 6891..7484 /translation="MKKWFTRLTIILSVLMLSSCGYNDFQTKDEATKAAWGEVVNQYQ RRADLIPNLVNTVKGYATHEKDTLEAVTKARAAATSFQITPEVLNNPEAFNKFQQVQG ELSSALSRLMVVTENYPQLKADTGFRDLQSQLEGTENRITVARQRYIVAVKDYNVLAR SFPTNITAKIFSYPVKPSFTVENEKAISTAPAVNFGK" /product="LemA family protein" BASE COUNT 1692 a 2453 c 2302 g 1634 t ORIGIN 1 ctgactctag tcgatgctac gacagcgtat gacgtgtaga ggagtctgat acgccgaact 61 ccgcacagac cacttcccgg accgccgtcg gcgctcctac cggcgtcggg ggagaggcgc 121 cgccggaccc cgcgcccacc ccaaaaaaat acgcgccgga aagtcaggac aaggcggggg 181 gtccccgccg cttttttctt ctccgaacgc tgcaacaaga ccgactttca tggccggagc 241 cacgccaaaa gttgcttttg agaattttct tatgtcgacg cccgcggcaa atcgacagac 301 tcgaattatc gttcgtaccg caatcgcgtc atccagacac gatgttgacc cggtgaatca 361 tgtcccggcg aggaaaacgt catgaaaaac actgttctgc tgctgccaat cggcgtcgcg 421 ctggtgatct cgggcgcagc ccatgccgca cgttcatcca gcgtggccgt aaacggcgtg 481 tcccggccac cgccatgcaa cctcacgctc ggcgacgatg gcattgccga ctacggcatg 541 attcccgcag catcactgat ccgtggcaac tacactgact tgccgtacaa aaacgtggca 601 ttgcgcattg cctgcccgcg caaaacccgg gtcgggctga gtgttaccga caaccgcccc 661 gattccctga tcgtcgcatt cggcgaggcc agatacaact tcggcctggg caaggccggc 721 ggcgccaata tcggcggcta tcggctattc ctggaacaaa gcggcgtgac cacagatggc 781 aggccggcca accagatttt ctccgttatc ggttcccgca actggaacaa gaccggcccc 841 ggcggacaac tcggtaaaga ccggctcttt tcctgggcgg cgcccaacac cagcgtaccg 901 gccatgttcc agaccatcag cggttcgatc ctgatcatcc ccacactgaa caaacccgaa 961 aatctgccga tgatgcaaca gatcaagctc gatggcgccg tcactctgga aataatgtac 1021 ctgtaagccg cggcaccgca acgcccgcaa gctgacctct gtcgttcctg caaaccgcag 1081 caaccggcaa caaccggcag ccgaaaaaaa cggcgcactt caaagaaatg cgccgttttc 1141 ggcttgctgc gcggcgctcg gttcagagca ccgccggaca cgtgaagatc aacgctccga 1201 caaggcatcc atcacgcaca aggcagtcat gttgacgatg cggcgcacgg tggccgacgg 1261 cgtcaggata tgaaccggct tggcgcaacc gagcaggatc ggaccgattg ccacgccatt 1321 gcccgatgcg gtcttgagca ggttgtaggc aatattggcg gcatcgatgt tcggcatcac 1381 cagcagattg gcttcgccct tgagcggcga atccggcatg accttggtca gcagcttgcg 1441 atcgagtgcg gtgtcgccgt gcatttcgcc gtcgatttcc agttccggcg ccagcttttg 1501 caccagtgcc agcgccgcgc gcatcttgcg tgccgactcg ctgttgctgg aaccgaagtt 1561 ggagtgcgac agcaaggcgg cgcgcggcaa caagccgaag cgacgcattt cttccgcagc 1621 cagaatcgtg atttcagcca gctcttcggc ggtcggattt tcattgacgt gcgtgtcgac 1681 cagcaccagt tgacgcgttg gcagaatcag cgcattcatg gcggcgaaca cattgacgcc 1741 ttcgcgcttg cccagcactt gctcgatgta atgcaagtgc aactgggtgg tgccgtaggt 1801 accgcagatc atgccgtcgg catcgccctt gtggatcgcc atcgaaccga tcagcgtgtg 1861 acggcgacgc atttccagct tggcgtactg ctcggtcacg cccttgcgct tggtcagctc 1921 caggaacgat tgccagtaat cgcgatagcg ggcatcgaag ttcggattga tgatttcgaa 1981 atcgacatcc tgacgcagac gcaggccgaa tttcttgatg cgctgttcca gcacttcagg 2041 acgtcccacc agaatcggtt tggccaggcc ttcatcgacc accacctgca ccgcgcgcaa 2101 gacgcgctct tcttcgcctt cggcatagac gatgcgcttg cggtcgtccg gtgccttctt 2161 ggcagcctgg aaaatcggac gcatgaacgt accgctgtgg tacacgaact gctccagctt 2221 ttcggcatag gcgttcatgt ccttgatcgg ccgtgcggcg acaccggaag tctcggcagc 2281 gcgcgccacg gcaatcgcga tcttgatcat cagacgcgga tcgaacggct tcggaatgat 2341 gtactcggga ccgaacgaca gattggcaat gccataagtc gaagcgacga tgtcggattg 2401 ttccgcctgc gccagttcgg caatcgcatg cactgccgcg atttccattt cacgcgtgat 2461 ggtggtggca ccggaatcga gcgcgccacg gaaaatgtac gggaagcaca gaacgttgtt 2521 gacctgattc ggatagtcgg aacgaccggt ggcgatgatt gcgtcatcac gcacggccat 2581 gacttcttcc ggcaggattt caggagtcgg gttggccaat gccagaatca gcggacgcgc 2641 tgccatctgc ttgaccattt ccggcttgag cacgccgccg gcggaaacgc cgaggaaaat 2701 gtctgcgccc gggatcacat cggccagggt acgcgcatcg gtttcgcggg cgaaacgttc 2761 cttgtccgga tccatcagtt cgacgcggcc cttgtagacc acgccggcca gatcggtgac 2821 atagatgttt tcaatcggga aaccgagatc gacgatcagg tccaggcagg ccagcgcagc 2881 ggcacctgca ccggagacca ccagcttgca atccttgatg ctcttgttga cgaccttgag 2941 gccattgaga atcgccgaac cgacgatgat cgcggtaccg tgctgatcgt catggaatac 3001 cggaatcttc atgcggtcgc gcagcttgcg ctcgatgtag aaacattccg gagccttgat 3061 gtcttccaga ttgatgccgc cgaacgtcgg ctccagcgag gcgatgatgt cgcacagctt 3121 gtcgggatcg gtctcgttga tttcgatgtc gaacacatcg atgccggcaa atttcttgaa 3181 caggacgccc ttgccttcca tcaccggctt ggatgccagc gggccgatat tgcccagacc 3241 cagcaccgca gtaccattac tgatgaccgc caccagattg ccgcgcgcgg tgtacttgaa 3301 ggcattggcc ggatcggcca cgatttcttc gcaggcagcc gccacaccag gagaatatgc 3361 cagcgagaga tcgcgctgat tggtcagcaa tttggtcggc gtgacactga tcttgccggg 3421 cgtcggaaac tcatggtatt ccagcgctgc ctgacgaagt tgctgacgca cttcttcttt 3481 cttggtgatc atcgaatcca tactctgcgt tctcttttct tgacgtgacg aaggcttgca 3541 agtttaacag aggtcggccc gcgatcatag gccggaagcg ggtcggacat ggtgcagtgc 3601 atcaggcagc aagccagagc cggcgtggtt tcacagacga aacaaagata agtggtaaga 3661 ccactcaggt acgcactcaa gtactgcgag atttgagtcg aattgattac gaattggtta 3721 caatcacgca tgctttccga attcgaactc atcgcccgtt acttcacccg cccttctgcg 3781 cctgacagcc ggactgccct tggcgtcggt gacgattgtg cactgctgac gccggccccc 3841 ggcatgcaac tggcagtctc gaccgacatg ctggtggctg gccggcattt cttcccggag 3901 gtcgatccgc tcaccctcgg tcacaaatgt ctggccgtca atctgtccga tctggccgcc 3961 atgggcgcgc acccgattgc cttcacgctg gcgctggctt tgcccgaagc acgcgaagaa 4021 tggctggcac cgtttgcgca aggcatgctg acgctggccg atgaacatgg ctgcgagctg 4081 gtcggcggcg acacgaccaa gggaccactg accatcagca tcacggtgtt cggcgaaatc 4141 ccgttcaatc aggcgctgcg gcgcgacgcc gccaaggctg gcgacgatat ctgggtctcc 4201 ggcacactgg gtgacgcgcg cctggcgctg gctgcctacc ggcaagaact ggtcctcgat 4261 gccgaagcgc accaaaaagc agcattgcgc atgcatcagc cttatccgcg actggcgctg 4321 ggcatggcgc tgcgtggcat tgcccatgcc gccattgata tttccgatgg cctggccggc 4381 gatctcggcc atatcctgca ccgctccggc gtcggcggcc aactcgatgt ggacgccctg 4441 ccggccggtg ccgtcttgca acaacaagcg ccggacttgc gccgccggtt cgcactcagc 4501 ggcggcgacg attacgaact ttgctttacg gcaccggcgg cgcgccgcaa gcaagtgcag 4561 gcagcggccg accacgccgc cactgccgtt acccggatcg gccagatcga agcccacagc 4621 gggctgcgtc tggttaccgg cgacggccag ccactggcac tgacgccgac ctccttcgac 4681 catttcactt catgacaaca acaatagaac aaggccgcaa ggcattcatc accaaaccca 4741 attcccgttt catgctggca cacccggccc actggctggc ccaaggtttc ggcagcggtc 4801 tttcgccaat catgccgggc acctccggca cgctgttcgc gtggctggca tacgcggtaa 4861 tgagcagccg ctggcccgat ctgtttacgc cggccaactg gctgatcatc atcgccgtcg 4921 gtttcgtggc cggcatctgg gcctgccatc gcaccggccg tgatctcggc gcgcccgatc 4981 acggcagcat ggtgtgggat gaaatcattg ccttctggct ggtgctggta ctggtgacac 5041 cggccagtct gatgacgcag ttctgggcct tcatcgcgtt tcgtttcttc gacatggtga 5101 aaccggcgcc gatcgcttat tttgatcgcc gcttcaaagg cggtttcggt gtcatgtggg 5161 acgacatcgt cgctgcgttt tacaccttgc tggtgtttgc attctggcgt tcaatgtaag 5221 ctgcattttt tgcatgaggc cgcagccggt ccatgcataa aaggagtttc aggcgaggtt 5281 aacaagagta tgcttgatgc atcgggcaag cttggcatgg ttgtccggtc acgttgacca 5341 acacccactt tcaacaatga ggatgacatc aacatggata cggcaattga tctggccgca 5401 cgcgtcggcc aagtactcaa atcccgcaac ttgctgctga cgaccgccga gtcgtgtacc 5461 ggcggcggtg tagcgcaggc gattacagaa atcgccggtt cttcggaatg gttcgactgt 5521 ggctttgtga cgtattccaa cgcctcgaaa aatgaattgc tggatatctc ggaagcattg 5581 attgcccagc atggcgcggt cagtgaagaa atcgccgcgg ccatggccga aggcgcgatt 5641 gccaacagca gttccgatgt cgccgtctcc accaccggca ttgccggacc gggcggcgcg 5701 gtgccgggca agccggtcgg caccatttgc ttcggctgga aagtcggtga ccatacgcat 5761 accgaacgac tggtattttc cggcgaccgg catgcgatcc gcgaacagac cgtggtgcat 5821 gcgctgcaag gtttgctgaa gtttatcggt ccggccaact gacagcggct tgcggtccgc 5881 cagccggacc gcagcagcaa ttctcaatca agcgacgcca tcagcgccgg aaggcgttga 5941 tggcgtcgcg cgtttccagc gccacgcggc gtgcggcagc agcgtagttt tcttcgcctt 6001 gcgcttgcgc atacagaatg gcgcgtgacg aattgatcat catgccgccg ccctgtgctg 6061 tcttgccagc cttgacggtg gccgcaacgt ccccaccctg cgcgccgact cccggtacca 6121 gcaacggcat gtcgccgatg atattgcgca cctgtgccag ttcttccggg aacgtggcgc 6181 cgaccaccag gccgcactgg ccgttggtat tccatttgtc cgccaccagc cgtgctacat 6241 gctgatacag cggcacgccg tccaccttca ggaattgcag atcggaaccg ccggcattcg 6301 aggtgcggca caacacgatg gcgccgcgat ccttccattc cagatagggc gctaccgaat 6361 caaaccccat atacgggctg acggtgacgg catcggcgcc atagcgttca aaggcttcgc 6421 gtgcatattg ctcggcggtg gcaccgatat cgccgcgctt ggcgtccagt accaccggaa 6481 tggccggata tttttcacgg atatacgcgc agatttcttc cagttgatct tctgcccgca 6541 aggcggcaaa gtaggcgatc tgtggtttga acgaacaggc cacgtcagcg gtggcatcga 6601 tgattccttt gcaaaacccg acaatggctt ccggcttgcc cttccattgc gccggaaact 6661 tgctgatatc cgggtccagg cccacgcaca gcagtgaatc atgcgtgttc cacacagcag 6721 ataatttgtc gataaatgtc acggtaagcc ttaatatgca aagatgcgat attgtaacgc 6781 ggcaggcagg ccgcacagaa ccgctatcgc cgcgccggtg gaaattgctt gccgcgctgt 6841 caacagaatt cgcccgattt caacagattt catttctcca gaggaacaat atgaaaaagt 6901 ggtttacccg attgacaatc atcctttccg tactgatgct gagcagctgc ggctataacg 6961 atttccagac caaggacgaa gccaccaagg cggcctgggg tgaagtggta aatcaatacc 7021 agcggcgcgc cgacctgatt ccgaatctgg tcaataccgt caagggctac gccacgcatg 7081 aaaaagacac gctggaagca gtgaccaagg cgcgcgccgc cgccaccagc ttccagatca 7141 cgccggaagt actgaacaat ccggaagcct tcaataaatt ccagcaggta cagggcgaat 7201 tgtcgtcggc cctgtcgcgc ctgatggtag tcaccgaaaa ctatccgcaa ctgaaggccg 7261 ataccggttt ccgcgatctg caatcgcaac tggaaggcac tgaaaaccgc atcaccgtgg 7321 cacgtcagcg ttatatcgtg gcagtaaaag actacaacgt gctggcccgc agcttcccca 7381 ccaatatcac ggccaagatc ttcagctatc cggtcaagcc gtcattcacc gtagagaatg 7441 aaaaggcgat ttccactgct cctgccgtca acttcgggaa ataaatcgat ccatgcctta 7501 cctcaggatt ttgctggcac tgctgctgaa ttgcagcttg cagttggccc atgcccagga 7561 tttcgtcacc gtacccaaac tgacttcgca tgtcatcgat caggtgcagt tgcttgatga 7621 aaagcaaaga cagacgctgg atcaggtatt gacggaatac gaagcacgca gcggcagcca 7681 gattgccatc ctgctgatgt cgagcaccgc cccggaagcg atcgagcaat acggcattcg 7741 ggtggcggat gcctggcaac tgggtcgtaa aggggtcgac gacggcgtga tcctgattgt 7801 tgccaaggat aatccgaagg cattgcgacg cctgcgaatc gaggccggac gcggggttca 7861 gggcagcctg acggatgcgc aatcgaagcg catcctggaa gacgtgatcg ccccgcattt 7921 tcgtcagaac gattattacg gcggcctggc tgccggcatt tccgcactga ccagcgtcat 7981 cgacaaagaa caactgccgg ccgccaaaaa agccgcggcg gaacctgaag aagactggct 8041 cggcgatctg ctgccgatag tggtcttcgt cgtcttcatc g //