LOCUS hautotrophicum_S2_L001_R1_001_2_(paired)_contig_83 6785 bp DNA linear UNK DEFINITION Contig hautotrophicum_S2_L001_R1_001_2_(paired)_contig_83 from Herbaspirillum autotrophicum IAM14942 ACCESSION unknown FEATURES Location/Qualifiers source 1..6785 /mol_type="genomic DNA" /db_xref="taxon: 180195" /genome_md5="" /project="leonardo_180195" /genome_id="180195.4" /organism="Herbaspirillum autotrophicum IAM14942" CDS complement(142..897) /db_xref="GO:0006118" /db_xref="GO:0009055" /translation="MKVLVPVKRVVDYNVKVRVKSDGSGVDIANVKMSMNPFDEIAVE EATRLKEGGKVTEVVAISCGVTQCQETLRTAMAIGADRGILAEVPADLDLQPLAVAKL LKAIADKEQPQLIILGKQAIDDDCNQTGQMLAALLGWPQATFASKLVLEDGKVTVTRE VDGGLETLALTLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLDIVKPEDLGVDVAPRLK TVKVAEPAKRTAGVKVPDVATLVARLRNEAKVI" /product="Electron transfer flavoprotein, beta subunit" CDS complement(1002..1163) /translation="MKLQLSPFPAKMPHEFFAALRAKKHVAGSAAPVNAGVCLVRFTH KVIHSYRLR" /product="hypothetical protein" CDS 1323..2804 /db_xref="GO:0004029" /translation="MAQRYQLFINNEWVDPLSGQWFDSLDPFSGEPWAEVPRANKDDV ERAVEAASAAMEGPWGKMSATDRGMLLHKLGSLIEKHADTLTLAESRDNGKLKSEVAG QVRYMAKYFYYYGGLADKIQGAVIPMDKPKVFNYTRYEPMGVVATITPWNSSLLLTAW KVAPALCAGNTIIAKPSEHTSVSLLELAKLFVEAGFPPGVFNVITGFGGEVGEPLVTH PKVPRIAFTGGDEGGRKVNVLGAQHFKRVSLELGGKSPHIIFDDADLTRAANGVITGI FSAGGQTCMAGSRLLLQESIHDEFVERLVAIASKAKLGDPTLPDVQVGPVATRPQFDK VMEYIAIAKNEGARCVFGGNARTGEGFGAGQFVEPTIFVDVDNSMRIAQEEVFGPVLS VIKFKDEEDAIRIANDIRFGLASGVWTTSLHRAMLMTSRIKAGTVWVNNYRSTSFTTP FGGYKDSGTGREGGIEAVKEYLETKSVWISTDLDMPDPFIRKY" /product="Aldehyde dehydrogenase (EC 1.2.1.3)" /EC_number="1.2.1.3" CDS complement(2788..2916) /translation="MRHRRAMPAHDGRVLIAAITAVAAIGPGAAYAAHGIPINTCG" /product="hypothetical protein" CDS 2925..4400 /db_xref="GO:0000104" /translation="MGNMNTHAAGWDLLVIGSGISGLSAAVAAATAGARVLVLERSVP EEFGGNTRWTESYFRMKSDTEVSDDFEELLISNAGYNLDPNIVQEVAGEYANWPSYVK AHGMPDPELISTLSALAGPTVQWLKSFGVRFDTLPTYFVTAAAPRLMPVGGGLAMIEA LLAQAQKIGVEFRYRTTATKMERGMAGGAFSVTVTDAGGEQQQLAATNVMIASGGFEG NPEMLTQYLGSSAKFVRPVARGGYYNRGEGIRMALAAGAAPAGDFSSYHAEPLDPRSA ATEALVMNFTYGVLINKRGKRFLDEAPGPVDLHYDHISRDIGEQPDGIAYVVFDQRIN DVPNWKKSIRTDQPAIQADTLEQLAAACGLPVTAFMRTIAEYNNACTDGEFKPLEADG LATRGLDINKSNWSRPISAGPFYAYPIIPGICFTYGGVKTNKQAQVIDHDGRPIAGLY AAGEAAGLYYQVYTGATSVMRGAVFGKIAGEHAAAASGRSD" /product="Fumarate reductase flavoprotein subunit (EC 1.3.99.1)" /EC_number="1.3.99.1" CDS 4570..5829 /translation="MKIKQVLKHNGSSLALKAISAVVCSGLLHGTAMAQPQGISDNVV RIGVLTDMSGTFSDFAGKGAVEAVKMAVEDFGGKVNGKPIEVIFADHLNKADIASSTA REWIDQRKVDMITDISGSATALATIKVAAEKKRIAIVNGAGTTRVTNEDCTPFSVHYN HDTASMANVAGKYIVRQGGTTWYFLTADYSFGYSLQADTTAVVDANGGKVVGAVKHPF NTSDFSSYLLQAQTSGAKIIGLANAGADTINSIKTASEFGMLNSGKQKFAGLLMFIND VHALGLKAAQGLYITEAFYWDLNDETRKWSERFYKRVGKMPSSIQAADYSSTMQYLNA IKATGTDDAETVIKKMKETPINDFYTKNGKIRADGRMVHDMYLMQVKTPAESKKPWDY YHVRATVPGDEAYPSMASGTCAFARKQ" /product="Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein" CDS 5845..6747 /translation="MRRKIPSITALMAFEAAARYENFSRAAEVLSLTEGAISRQIAGL EDFLALRLFHRIKKRVQLTDIGKAYYVHVREDLNRLERNTLSAMAYQDGQQILELAVI PTFATKWLIPRLSAFSRLHPAIVVNLSERALPFLFGDSVFDAAVHYEHPAWAGNAQEL LFDEELVPVCSPQLLAGKAQLSVDELATYPLLHKNTREDAWRHWFDQQGYQGLNPVGG PRHDLFSMIIQAACYGRGIALVPRLYIEDELKSGALLIPTDLPIRGLKKYCVVYPEHE EVSATLKLFIDWLKQVAQEQGGFT" /product="Transcriptional regulator, LysR family" BASE COUNT 1456 a 1910 c 2014 g 1405 t ORIGIN 1 gccgcactgg cgttgtgacc tgcgaccaga atatgcacgt cgccgccggc ttggacagct 61 gcggtaaccg tgttcagggt gctgcctttg agactgatgt tattgtgttc tgcgatgact 121 aatgcggtca tgatcggttc cttaaattac tttggcttcg ttgcgcagcc tggcaaccaa 181 ggtcgccaca tccggcacct tgacgccagc agtacgcttg gcaggctcag ccaccttgac 241 cgtcttcaga cgcggtgcca catcgacgcc gagatcttcc ggcttgacga tgtcgagggt 301 ctttttcttg gccttcatga tatttggcag cgtcacgtaa cgcggctcgt tcagacgcag 361 gtcagtagtc acgatggcag gcaaggtcaa tgccagtgtt tccagaccgc catcgacttc 421 acgggtcacg gtcactttgc cgtcttccaa caccagcttg gaagcgaatg tcgcttgcgg 481 ccagcccagc aacgcggcca gcatctgacc ggtctgattg cagtcatcat caatggcttg 541 cttgccgagg atgatcagtt gcggttgttc tttgtcggca atcgccttga gcaacttggc 601 gacggccaac ggttgcaggt ccagatcggc cggcacttcg gccagaatgc cgcggtcggc 661 gccaatcgcc atcgcggtgc gcagggtttc ctggcattgc gtcacgccac aggaaatcgc 721 cactacttca gtgacttttc caccttcttt gaggcgtgtg gcttcttcca ctgcaatttc 781 gtcaaacgga ttcatcgaca ttttgacatt ggcgatatcc acgccgctgc cgtcggattt 841 gacgcgtact ttcacgttgt aatctactac ccgcttgacg gggactaata ctttcatgcc 901 tgccgctctc cacaatattg aaagatgcga tgtcattttc cgcagcgcgc gacttgctgt 961 gactgacatc atcaggctgc aagtattggt cgattgaacg gtcaccgcaa acgataagaa 1021 tgaatgacct tgtgcgtaaa cctcacaagg cagacaccgg cgttgacagg tgcggcgctg 1081 ccggcgacat gtttttttgc ccgcagcgca gcaaaaaatt catgaggcat ttttgccgga 1141 aacggcgaaa gctgcaattt caaaggcttt gcggcgtgtg tcgcggatct tcgaaacaga 1201 gttgattcca aatcggcaca acctcattac tattattcgt ttgctagcgg ggcggcaaaa 1261 aatcaataat tttccatcga caacaagaac tgcacgcatt tcattctttc aaggagcccc 1321 gcatggcgca gcgctatcag ttattcatca acaacgagtg ggttgatccg ctctccggtc 1381 aatggtttga ttcactcgat ccgttcagcg gcgaaccgtg ggcagaagtg ccacgggcca 1441 acaaggacga tgtcgagcgt gccgtggaag cggcatcggc tgccatggaa ggtccgtggg 1501 gcaagatgtc cgccaccgat cgcggcatgc tgttgcacaa gctgggcagc ctgatcgaga 1561 agcatgccga taccctgacg ctggccgaga gccgcgacaa cggcaagctc aagagcgaag 1621 tcgccggtca ggtgcgttac atggccaagt atttttatta ctacggcggt ctggccgaca 1681 agattcaagg cgcggtgatt ccgatggata agccgaaagt cttcaactat acccgttacg 1741 aaccgatggg cgtggtcgct accattacgc cgtggaattc ttcgctgttg ctgaccgctt 1801 ggaaggtagc accggccttg tgcgccggca ataccatcat tgccaagcca tccgaacaca 1861 cttcggtatc cctgctggaa ctggccaagc tgtttgtcga agccggtttc ccgccgggcg 1921 tattcaacgt catcaccggt ttcggcggtg aggtcggcga gccgctggtg acgcacccga 1981 aggtgccgcg cattgccttt accggcggcg acgaaggcgg acgcaaggtg aacgtgctcg 2041 gcgcgcagca tttcaagcgc gtatcgctgg aactcggcgg caagtcaccg cacatcattt 2101 ttgatgacgc tgatctgacg cgtgccgcca atggggtgat aaccggtatt ttctcggccg 2161 gcggccagac ttgcatggcc ggttcgcgcc tgctgttgca ggaaagcatt catgatgagt 2221 tcgtcgaacg gctggtggcc atcgccagca aggccaagct cggcgatccg accttgcctg 2281 acgtgcaggt aggtccggtg gcgacgcgtc cgcaattcga caaggtcatg gaatatattg 2341 cgattgccaa gaatgaaggt gcacgttgcg tgttcggcgg caatgcccgc accggcgaag 2401 gcttcggcgc tggtcagttc gtcgagccga cgatcttcgt tgatgtcgac aacagcatgc 2461 gcattgcgca ggaagaagta ttcggtccgg tgttgtcggt gatcaagttc aaggatgagg 2521 aagatgcgat ccgcatcgcc aacgatattc gcttcggcct cgcctcggga gtgtggacta 2581 ccagtctgca ccgggccatg ttgatgacct ccagaatcaa ggccggcacg gtatgggtca 2641 acaattatcg ttccaccagc ttcaccacgc cgttcggcgg ttacaaggac agcggcaccg 2701 gacgggaagg cgggatcgaa gcggtcaagg aatacctcga gaccaagagc gtctggatct 2761 cgaccgacct cgacatgcct gatccgttca tccgcaagta ttgatcggta taccatgtgc 2821 ggcataagcc gcgccgggac caatcgcagc aaccgcagta atcgcagcaa tcaggacgcg 2881 gccgtcatgc gcaggcatgg cgcgccggtg ccgcaacaga acaggtgggc aacatgaata 2941 cacatgcagc aggatgggat ttactggtga tcggcagcgg catctcgggc ttgtcggcgg 3001 cggttgcggc cgctacggcc ggggcgcggg tgctggtgct ggaacgttcg gtgccggaag 3061 aattcggcgg caatacgcgc tggaccgaat cgtatttccg catgaaaagc gataccgaag 3121 tcagcgatga ttttgaagag ctgctgatca gcaatgccgg ctacaacctg gatccgaata 3181 tcgtgcagga agtggcgggg gaatatgcca actggccatc ctacgtcaag gcgcatggca 3241 tgccggatcc ggaactgatt tcaaccttgt cggcactggc cgggccgacc gtgcagtggc 3301 tgaaaagctt cggcgtgcgc ttcgatactt tgccgactta ctttgtgacc gccgccgcgc 3361 cgcgtctgat gccggtgggc ggcgggctgg ccatgatcga ggcgttgctg gcgcaggcgc 3421 aaaagattgg cgttgaattc cgctaccgga cgacggcgac caaaatggaa cgcggcatgg 3481 caggcggtgc gttcagcgtg accgtgaccg atgccggcgg cgaacaacag caactggcgg 3541 cgaccaatgt catgatcgcg tcgggtggat ttgaaggcaa cccggaaatg ctgacgcaat 3601 atctgggcag cagcgccaaa tttgtacgac cggtggcgcg cggcggctat tacaaccgcg 3661 gcgaaggcat ccgcatggcg ctggccgccg gtgccgcacc ggccggcgat ttcagctcgt 3721 atcacgccga accgctggac ccgcgttcgg ccgccaccga agcactggtc atgaacttta 3781 cctatggcgt gctgatcaac aagcgcggca agcgctttct cgatgaagcg ccggggccgg 3841 tcgatttgca ctacgaccat atctcacgcg acatcggcga gcagccggac ggcatcgcct 3901 acgtggtgtt cgatcaacgc atcaacgatg taccgaactg gaaaaagagc atccgcaccg 3961 atcagccggc gatccaggca gacacgctgg aacagttggc cgctgcgtgc ggcttgccgg 4021 tgacggcctt catgcgcacc atcgcggaat acaacaacgc ctgcaccgat ggtgaattca 4081 aaccgctgga agccgatggt ctggcgaccc ggggcctcga tatcaacaag tcgaactggt 4141 cgcggccgat cagcgccgga ccgttttatg cctatccgat cattcccggc atctgcttca 4201 cctacggcgg tgtcaagacc aacaagcagg cccaggtgat cgaccatgac ggtcgtccga 4261 ttgccggtct gtatgccgcc ggtgaagccg caggactgta ttaccaggtg tataccggcg 4321 ccacctcggt catgcgcggc gccgtgttcg gcaagatcgc cggcgaacat gccgcagccg 4381 caagcggccg cagcgactag cactttccgg cggtcgcggc cggcatcctg ccgcgaccgc 4441 cgggttttca ggcacgtaaa acaagaaagc gatgatctgc gctgtcgtcg cgggcgatgg 4501 ctcgtccgca gatgcggtat gcggcgcgat tgcagtccga tatctcattt tttcattcag 4561 gagacacata tgaaaatcaa acaggttctc aagcataacg gcagttccct ggcgctcaag 4621 gccatcagcg cagtggtttg ttccggcttg ttgcatggca ctgccatggc acagccgcaa 4681 ggcatttccg ataacgtggt gcggatcggc gtgctgaccg acatgagcgg cacgttttcc 4741 gacttcgccg gcaaaggcgc ggtggaagcg gtgaagatgg cggtcgagga tttcggcggc 4801 aaggtcaatg gcaagccgat cgaagtgatt tttgccgatc acctgaacaa ggccgacatt 4861 gcctcttcca cggcacgcga gtggatcgac cagcgcaagg ttgacatgat caccgatatt 4921 tccggttcgg ccacggcact ggctaccatc aaggtggcgg ccgagaaaaa gcggatcgcc 4981 atcgtcaacg gcgccggcac cacgcgcgtg accaatgaag actgtacgcc attcagtgtg 5041 cattacaacc acgataccgc ctccatggcc aatgtggcgg gcaagtacat tgtcaggcag 5101 ggcggcacta cctggtattt cctgacggcc gattattcct tcggttactc cttgcaggcc 5161 gataccacag cggtggtgga tgccaacggt ggcaaggtgg tgggcgccgt caagcatccg 5221 ttcaatacct cggatttctc gtcctatctg ttgcaggcgc aaaccagcgg tgccaagatc 5281 atcggtctgg ccaatgccgg cgccgacacc atcaattcga tcaagaccgc ctccgaattc 5341 ggcatgctca attccggcaa gcagaaattc gccggcctgc tgatgttcat caatgatgtc 5401 catgcactgg gtctgaaggc ggcgcagggg ctgtacatca cggaagcgtt ctattgggac 5461 ctcaacgacg agacccgcaa gtggtctgaa cgcttctaca aacgcgtggg caaaatgcca 5521 tcgtcgattc aggctgccga ctattcgtcg accatgcaat acctgaatgc catcaaggcc 5581 accggcaccg atgatgcgga aacggtcatc aaaaagatga aagaaacccc gatcaatgac 5641 ttctatacca agaacggcaa gattcgcgcc gacggccgca tggtgcatga catgtatttg 5701 atgcaggtca agacgccggc ggaatcgaag aagccatggg actactatca cgtgcgcgcg 5761 accgtgccgg gtgacgaggc ttatccatcg atggccagcg gcacttgcgc cttcgccagg 5821 aaacaatgag cgcgatagcc gtcgatgcgt agaaagattc ccagcattac cgcattgatg 5881 gccttcgagg cggccgcgcg ttatgaaaat ttctcacgcg cggcagaggt attgtcgctg 5941 accgaaggcg cgatcagtcg ccagatcgcc gggctggaag attttctggc gctgcgtctg 6001 tttcatcgga ttaaaaagcg ggtgcagctg accgatatcg gcaaagccta ttacgtccat 6061 gtgcgcgagg acctgaaccg gcttgaacgc aacacgctca gtgccatggc gtatcaggac 6121 gggcagcaga ttctggagct ggcagtgatt ccgaccttcg ccaccaaatg gctgattccg 6181 cggctgtcgg cattcagtcg tttgcatccg gcaatcgtgg tcaacctcag cgaacgggcg 6241 ctgccatttc tgtttggcga ttcggtattc gacgctgccg tacattatga gcacccggcc 6301 tgggccggca acgcgcagga attattgttc gatgaagaac tggtgccggt atgcagtccg 6361 caattgctgg ccggaaaagc acaactcagc gtggatgaac tggcgaccta tcccttgctg 6421 cacaagaaca cgcgggaaga tgcctggcgt cactggttcg atcagcaagg gtatcagggc 6481 ctcaacccgg tgggcgggcc gcgccatgat ctgttttcca tgatcattca ggcagcctgt 6541 tatggtcgtg gcatcgcgct ggtgccgcgc ttgtatatcg aggatgaact caagagcggc 6601 gccttgctga taccgaccga tttgccgatc cgtggtttga agaaatattg tgtggtgtat 6661 cccgagcatg aagaagtttc cgccacgctc aagctgttca tcgactggtt gaaacaggta 6721 gcgcaggagc agggcggttt tacatgaaag acagcatgga tatcattctg gagacaaaaa 6781 acctg //