BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0050.0090.p (334 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH0350 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel trans... 317 3e-86 TM0501 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel trans... 315 1e-85 lin2297 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel tran... 312 6e-85 DR1568 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel trans... 308 9e-84 BS_oppD [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel tran... 306 5e-83 >BH0350 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Bha Bacillus halodurans Length = 329 Score = 317 bits (811), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 162/323 (50%), Positives = 214/323 (66%), Gaps = 6/323 (1%) Query: 3 VLLDVKNLKVDLPTENGMLHAVRGIDFQVRRGEMLCLVGESGCGKSMTSLALMGLLPRKA 62 LL V+ LK TE+G + +V G+ F+V+ GE + +VGESGCGKS+TSL++MGL+ Sbjct: 5 TLLSVRELKTYFYTESGAVPSVNGVSFEVKHGETVAVVGESGCGKSVTSLSIMGLVRSPG 64 Query: 63 QCSADHILFDGVDLHGMPDKQLMQLRGKRMAMIFQEPMTSLNPSYTLGNQLCEAMLQQPG 122 + I F+G DL + +++ +LRG ++MIFQEP+TSLNP +T+GNQL E +LQ Sbjct: 65 KIVGGDIRFNGQDLTTISEREYRKLRGNELSMIFQEPLTSLNPLFTIGNQLGEVILQHQQ 124 Query: 123 VSRAEARERALYLLHRTGISNAEDRLRQYPHQLSGGLRQRVMIAMSLMCNPDLIIADEPT 182 V++ EA+++ + +L + GI AE R YPHQLSGG+RQRVMIAM+L C P L+IADEPT Sbjct: 125 VTKEEAKQKGIEMLKKVGIPRAEQVYRSYPHQLSGGMRQRVMIAMALACEPKLLIADEPT 184 Query: 183 TALDVTIQAQILRMIRELQKEFGAAVIFITHDLGVVSRIADRVAVMYAGQVVETTDVAQL 242 TALDVTIQAQIL+++R+L KE A++ ITHDLGVV+ +AD V VMYAGQVVE DV L Sbjct: 185 TALDVTIQAQILQLMRKLVKENDTAILLITHDLGVVAEMADTVIVMYAGQVVEQADVFTL 244 Query: 243 FAQPRHPYTQGLLNCIPVRGKTLPGSHLQAIPGVVPSLVGQVSGCAFRNRCAKADSGC-E 301 FA P HPYTQGLL P G LQ+I G VP+ GC F RC A C Sbjct: 245 FATPAHPYTQGLLASTP--NIHASGEKLQSIEGTVPTHETMPKGCRFFPRCLHATEQCVH 302 Query: 302 RDPQMVQQGSVTAPHQARCLKLD 324 ++P +++ G RC D Sbjct: 303 QEPPLMKTGR---GQHVRCWLFD 322 >TM0501 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Tma Thermotoga maritima Length = 327 Score = 315 bits (806), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 159/323 (49%), Positives = 221/323 (68%), Gaps = 10/323 (3%) Query: 7 VKNLKVDLPTENGMLHAVRGIDFQVRRGEMLCLVGESGCGKSMTSLALMGLLPRKAQCSA 66 ++NLK TE+G++ AV G+ F+VR GE L +VGESG GKS+TSL++M LL + + Sbjct: 1 MENLKTYFYTEDGVVKAVDGVSFEVREGETLGIVGESGSGKSVTSLSIMRLLDQNGKIVD 60 Query: 67 DHILFDGVDLHGMPDKQLMQLRGKRMAMIFQEPMTSLNPSYTLGNQLCEAMLQQPGVSRA 126 I+F G +L + + ++ ++RGK +AMIFQEPM +LNP +T+G+Q+ EA++ VS Sbjct: 61 GKIIFKGRNLLELSENEMRKIRGKEIAMIFQEPMVALNPVFTIGDQIMEAIILHQNVSEK 120 Query: 127 EARERALYLLHRTGISNAEDRLRQYPHQLSGGLRQRVMIAMSLMCNPDLIIADEPTTALD 186 EAR+ A+ LL + GI E R+ +YPHQLSGG+RQR MIAM+L C P L+IADEPTTALD Sbjct: 121 EARKMAIDLLRKVGIPEPEKRVDEYPHQLSGGMRQRAMIAMALSCRPSLLIADEPTTALD 180 Query: 187 VTIQAQILRMIRELQKEFGAAVIFITHDLGVVSRIADRVAVMYAGQVVETTDVAQLFAQP 246 VTIQAQIL +++ELQKE+G A+I ITHD+GVV+ ++D+VAVMYAG+VVE DV +F +P Sbjct: 181 VTIQAQILELMKELQKEYGMAIILITHDMGVVAEMSDKVAVMYAGKVVEYGDVKTIFTEP 240 Query: 247 RHPYTQGLLNCIPVRGKTLPGSHLQAIPGVVPSLVGQVSGCAFRNRCAKADSG-CE-RDP 304 +HPYT LL IP + L++IPG VP + GC F RC + G C+ +P Sbjct: 241 KHPYTYALLESIP--RIDVEQERLKSIPGNVPDPLNFPPGCKFHPRCEFFEKGKCDVEEP 298 Query: 305 QMVQQGSVTAPHQARCL---KLD 324 ++ + H+ RC KLD Sbjct: 299 EL---EDLDGNHKVRCFFWQKLD 318 >lin2297 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Lin Listeria innocua Length = 358 Score = 312 bits (800), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 150/297 (50%), Positives = 213/297 (71%), Gaps = 5/297 (1%) Query: 1 MSVLLDVKNLKVDLPTENGMLHAVRGIDFQVRRGEMLCLVGESGCGKSMTSLALMGLLPR 60 M LL+VK+L + T G + A+RG++F + +GE L +VGESG GKS+T+ ++M LLP Sbjct: 1 MEKLLEVKDLNISFHTYAGEVKAIRGVNFDLYKGETLAIVGESGSGKSVTTKSIMRLLPE 60 Query: 61 -KAQCSADHILFDGVDLHGMPDKQLMQLRGKRMAMIFQEPMTSLNPSYTLGNQLCEAMLQ 119 ++ + ILF+G+D+ +KQ+ ++RGK +AMIFQ+PMTSLNP+ T+G Q+ E +++ Sbjct: 61 GNSEIKSGQILFNGMDIAKAHEKQMQKIRGKDIAMIFQDPMTSLNPTMTIGKQISEPLIK 120 Query: 120 QPGVSRAEARERALYLLHRTGISNAEDRLRQYPHQLSGGLRQRVMIAMSLMCNPDLIIAD 179 +S+ EA + AL LL GI+NAE+R++QYPHQ SGG+RQRV+IA+SL CNP ++IAD Sbjct: 121 HQKISKHEAHKTALRLLQLVGIANAEERIKQYPHQFSGGMRQRVVIAISLACNPQILIAD 180 Query: 180 EPTTALDVTIQAQILRMIRELQKEFGAAVIFITHDLGVVSRIADRVAVMYAGQVVETTDV 239 EPTTALDVTIQAQIL ++++LQK+ ++IFITHDLGVV+ +ADRVAVMY G++VE V Sbjct: 181 EPTTALDVTIQAQILDLMKDLQKKIDTSIIFITHDLGVVANVADRVAVMYGGKIVEIGTV 240 Query: 240 AQLFAQPRHPYTQGLLNCIPVRGKTLPGSHLQAIPGVVPSLVGQVSGCAF--RNRCA 294 ++F P+HPYT GL++ +P L IPG P L+ G AF RN+ A Sbjct: 241 DEIFYNPQHPYTWGLISSMPTLDTD--DEELFVIPGTPPDLLHPPKGDAFAARNKYA 295 >DR1568 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Dra Deinococcus radiodurans Length = 386 Score = 308 bits (790), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 165/337 (48%), Positives = 221/337 (65%), Gaps = 21/337 (6%) Query: 3 VLLDVKNLKVDLPTENGMLHAVRGIDFQVRRGEMLCLVGESGCGKSMTSLALMGLLPRK- 61 VLL V NLK T++G++ +V G+ F +++GE L +VGESG GKS+TSL +M L+P Sbjct: 32 VLLAVNNLKTYFNTDDGVVKSVDGVTFHIKKGETLAVVGESGSGKSVTSLTVMRLIPMPP 91 Query: 62 AQCSADHILFDGVD-----LHGMPDKQLMQLRGKRMAMIFQEPMTSLNPSYTLGNQLCEA 116 Q + ILF G D L + + ++ ++RG ++MIFQEPMTSLNP YT+G+Q+ EA Sbjct: 92 GQIAGGEILFTGKDGVQRNLVNVSEAEMRRIRGNDISMIFQEPMTSLNPVYTVGDQIAEA 151 Query: 117 MLQQPGVSRAEARERALYLLHRTGISNAEDRLRQYPHQLSGGLRQRVMIAMSLMCNPDLI 176 ++ G +R EA + A +L GI E R+ +YPHQ+SGG+RQRVMIAM+L C P L+ Sbjct: 152 VVLHQGKTRKEAMDVATDMLRFVGIPAPEKRVNEYPHQMSGGMRQRVMIAMALSCKPALL 211 Query: 177 IADEPTTALDVTIQAQILRMIRELQKEFGAAVIFITHDLGVVSRIADRVAVMYAGQVVET 236 IADEPTTALDVTIQAQIL ++R LQ+E G +++FITH+LGVV+ +ADRV VMY G+VVE Sbjct: 212 IADEPTTALDVTIQAQILDLMRNLQREVGMSILFITHNLGVVAEMADRVVVMYGGRVVEE 271 Query: 237 TDVAQLFAQPRHPYTQGLLNCIP---------VRGKTLPGSHLQAIPGVVPSLVGQVSGC 287 DV ++F PRHPYT GLLN IP V G+ P L+AIPG VP+ + GC Sbjct: 272 GDVIEIFKAPRHPYTMGLLNSIPRPSEDEHAHVPGQ--PKKRLEAIPGNVPNPLNLPPGC 329 Query: 288 AFRNRCAKADSGCERD-PQMVQQGSVTAPHQARCLKL 323 F RC A C + P + G H ARC++ Sbjct: 330 TFEPRCKFAVPQCSQAVPALEDTG---GGHMARCIRW 363 >BS_oppD [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Bsu Bacillus subtilis Length = 358 Score = 306 bits (784), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 154/310 (49%), Positives = 209/310 (67%), Gaps = 9/310 (2%) Query: 4 LLDVKNLKVDLPTENGMLHAVRGIDFQVRRGEMLCLVGESGCGKSMTSLALMGLLPRK-A 62 LL+VK+L + T G + A+RG++F + +GE L +VGESG GKS+TS A+M L+P Sbjct: 7 LLEVKDLAISFKTYGGEVQAIRGVNFHLDKGETLAIVGESGSGKSVTSQAIMKLIPMPPG 66 Query: 63 QCSADHILFDGVDLHGMPDKQLMQLRGKRMAMIFQEPMTSLNPSYTLGNQLCEAMLQQPG 122 ILF+G DL + +K++ +RGK + MIFQ+PMTSLNP+ +G Q+ E + + Sbjct: 67 YFKRGEILFEGKDLVPLSEKEMQNVRGKEIGMIFQDPMTSLNPTMKVGKQITEVLFKHEK 126 Query: 123 VSRAEARERALYLLHRTGISNAEDRLRQYPHQLSGGLRQRVMIAMSLMCNPDLIIADEPT 182 +S+ A++RA+ LL GI E R+ Q+PH+ SGG+RQRV+IAM+L NP L+IADEPT Sbjct: 127 ISKEAAKKRAVELLELVGIPMPEKRVNQFPHEFSGGMRQRVVIAMALAANPKLLIADEPT 186 Query: 183 TALDVTIQAQILRMIRELQKEFGAAVIFITHDLGVVSRIADRVAVMYAGQVVETTDVAQL 242 TALDVTIQAQIL ++++LQK+ ++IFITHDLGVV+ +ADRVAVMYAGQ+VET V ++ Sbjct: 187 TALDVTIQAQILELMKDLQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVETGTVDEI 246 Query: 243 FAQPRHPYTQGLLNCIPVRGKTLPGS---HLQAIPGVVPSLVGQVSGCAFRNRCAKA-DS 298 F PRHPYT GLL +P TL S L AIPG P L G AF R + A Sbjct: 247 FYDPRHPYTWGLLASMP----TLESSGEEELTAIPGTPPDLTNPPKGDAFALRSSYAMKI 302 Query: 299 GCERDPQMVQ 308 E++P M + Sbjct: 303 DFEQEPPMFK 312