BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0050.0083.p         (196 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA4799 [F] COG0563 Adenylate kinase and related kinases Pae Pseu...   237   1e-62
DR0202 [F] COG0563 Adenylate kinase and related kinases Dra Dein...   117   2e-26
Cgl0315 [F] COG0563 Adenylate kinase and related kinases Cgl Cor...    91   2e-18
BH1014 [F] COG0563 Adenylate kinase and related kinases Bha Baci...    72   1e-12
DR2273 [F] COG0563 Adenylate kinase and related kinases Dra Dein...    71   2e-12

>PA4799 [F] COG0563 Adenylate kinase and related kinases Pae Pseudomonas
           aeruginosa
          Length = 192

 Score =  237 bits (604), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 114/161 (70%), Positives = 132/161 (81%)

Query: 21  RYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQAVPHSQFESAVREASHGPCW 80
           R +VVGTSGAGKSTF+ ALAA+LG  ++ELD  YWG  WQAVPH +FE AV  A+  P W
Sbjct: 13  RVVVVGTSGAGKSTFSAALAARLGCTHVELDRLYWGPGWQAVPHERFEHAVERATTAPRW 72

Query: 81  VADGNYSAVRELLWSRATDVIWLNYGRATVFSRVFWRTVSRGLLRTRLSHGNRESLRMAF 140
           VADGNYSAVRELLW RAT V+WLN+GR TVFSRV  RT++RGLLRTRLSHGNRESLRMAF
Sbjct: 73  VADGNYSAVRELLWGRATHVVWLNFGRWTVFSRVLRRTLARGLLRTRLSHGNRESLRMAF 132

Query: 141 LSRDSILLWAYTTFEKNRHKFSQLREDPHYAHLQWHEFRQP 181
            SRDSILLW++TTF  NR K++ LREDP +AHL+W E  +P
Sbjct: 133 CSRDSILLWSWTTFAGNRRKYTGLREDPRFAHLRWVEVGEP 173


>DR0202 [F] COG0563 Adenylate kinase and related kinases Dra Deinococcus
           radiodurans
          Length = 178

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 100/171 (58%), Gaps = 2/171 (1%)

Query: 21  RYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQAVPHSQFESAVREASHGPCW 80
           R +V+GT+G+GK+TFA+ALA +LG  + E DA+    +WQ  P  +F + V   +  P W
Sbjct: 3   RIIVIGTTGSGKTTFARALAQRLGLPHGEQDAWNHEANWQMAPLGRFRARVDTFTSQPAW 62

Query: 81  VADGNYSAVRELLWSRATDVIWLNYGRATVFSRVFWRTVSRGLLRTRLSHGNRESLRMAF 140
           V DGNY   R+L W+RA  +IWL++    V+SR+  RT+ R L +  L +GNRE+ R A 
Sbjct: 63  VMDGNYGKARDLGWARADTLIWLDFPAWLVYSRLVRRTLWRVLTQQELWNGNRETWRGAL 122

Query: 141 LSRDSILLWAYTTFEKNRHKFSQLREDPHYAHLQWHEFRQPRQARAFLLAV 191
           L  +  L W + T  + R +   L  +  + HL+    R P +AR FL AV
Sbjct: 123 LDPEGPLRWFWKTHWRRRQETPALAAE--FPHLRLVRLRSPGEARRFLAAV 171


>Cgl0315 [F] COG0563 Adenylate kinase and related kinases Cgl
           Corynebacterium glutamicum
          Length = 187

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 5/175 (2%)

Query: 20  RRYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQAVPHSQFESAVREASHGPC 79
           +R  V G SG GK+T  + +AA  G   +ELD+ Y GE+W  VP   F + V++   GP 
Sbjct: 13  QRIAVSGVSGVGKTTLCKQIAALSGFPRVELDSLYHGENW--VPRETFVAEVQDFIKGPQ 70

Query: 80  WVADGNYSAVRELLWSRATDVIWLNYGRATVFSRVFWRTVSRGLLRTRLSHGNRE-SLRM 138
           WV +  Y  VR L+  RA  V+WL+Y       R+  RT+ R L +T+L + N E  L  
Sbjct: 71  WVMELQYRQVRPLIVERADTVLWLDYSTPRQMFRLIKRTIPRSLFKTKLFNDNIEPPLWT 130

Query: 139 AFLSRDSILLWAYTTFEKNRHKFSQLREDPHYAHLQWHEFRQPRQARAFLLAVDE 193
            F   D I+ W + T  +N  K      +  +A L       P++ + +L A  E
Sbjct: 131 IFKDPDHIVRWGWQT--RNSLKKVTPTFEGRFAPLTVVRLSSPKETKRWLRAYGE 183


>BH1014 [F] COG0563 Adenylate kinase and related kinases Bha Bacillus
           halodurans
          Length = 178

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 14/181 (7%)

Query: 20  RRYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQAVPHSQFESAVREAS--HG 77
           +R +++G  GAGKSTFA+ L  + G   I LDA +W   W  VP +  E AV +     G
Sbjct: 2   KRVMIIGPGGAGKSTFAKQLHERTGLPLIHLDAHFWKRGW--VPSTTEEIAVMQKQWVQG 59

Query: 78  PCWVADGNYSAVRELLWSRATDVIWLNYGR-ATVFSRVFWRTVSRGLLRTRLSHGNRESL 136
             W+ DGNY A  E+ ++    VI+ ++    T++  +  R +  G  R+ +  G  E L
Sbjct: 60  EEWIIDGNYGATLEIRFAACDTVIYFDFPTYMTLYGILKRRLMYHGQSRSDMGEGCIEKL 119

Query: 137 RMAFLSRDSILLWAYTTFEKNR-HKFSQLREDPHYAHLQWHEFRQPRQARAFLLAVDEQD 195
              F+       W  T   + R H    L E P   ++    FR     R FL  ++++ 
Sbjct: 120 DWIFIK------WVATYRRRKRPHILRALTELPREKNVII--FRSRSDVRRFLQEIEQKP 171

Query: 196 S 196
           S
Sbjct: 172 S 172


>DR2273 [F] COG0563 Adenylate kinase and related kinases Dra Deinococcus
           radiodurans
          Length = 162

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 53/101 (52%)

Query: 20  RRYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQAVPHSQFESAVREASHGPC 79
           +R L+VG+ GAGKSTFA+ LAA+ G     LD  YW   W+ V    +   ++ A  G  
Sbjct: 2   KRVLIVGSPGAGKSTFAKKLAARTGLPLTHLDDLYWNAGWEKVERDVWLKRLQTALDGDA 61

Query: 80  WVADGNYSAVRELLWSRATDVIWLNYGRATVFSRVFWRTVS 120
           W+ DGNY +  +   +RA  VI+    R     R+  R +S
Sbjct: 62  WIMDGNYGSTLDRRAARADTVIFFVPPRELCLLRMLRRELS 102