BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0049.0082.p (191 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1069 [J] COG0231 Translation elongation factor P (EF-P)/trans... 224 1e-58 NMA1133 [J] COG0231 Translation elongation factor P (EF-P)/trans... 206 4e-53 NMB0937 [J] COG0231 Translation elongation factor P (EF-P)/trans... 205 5e-53 PA2851 [J] COG0231 Translation elongation factor P (EF-P)/transl... 200 2e-51 FN0720 [J] COG0231 Translation elongation factor P (EF-P)/transl... 159 3e-39 >RSc1069 [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Rso Ralstonia solanacearum Length = 188 Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 108/187 (57%), Positives = 139/187 (74%), Gaps = 6/187 (3%) Query: 1 MKFAKEIRVGNIIMVDSKPMIVLRSDVNGSSRTGFTYKWKMKNLLTNSPLESVFRGDDKF 60 +K A+E+R GN+ M+ + PM+VL+++ + S R K K KNLLT +P ESVF+ DDK Sbjct: 3 LKIAQELRAGNVFMIGNDPMVVLKTEYSRSGRNAAVVKMKYKNLLTGAPSESVFKADDKM 62 Query: 61 DVVVLDKKPVTYSYFADPLYVFMDEEYNQYEIEGENMGDAIGYLKDGMQCEAVFYEGKAI 120 D ++LDKK TYSYFADP+YVFMD +YNQYE+E ++MGDAI YL+DGM E FY KAI Sbjct: 63 DQIILDKKECTYSYFADPMYVFMDTDYNQYEVEADSMGDAIHYLEDGMAAEVTFYNEKAI 122 Query: 121 SVEMPTTIVRKVAYSEPAVKGNT-SGNVLKEAKIENAIEANQITVMVPLFVSQDDDIEID 179 SVE+PTT+VR++ Y+EPAVKG+T SG VLK AKI+ E + VPLF S D IEID Sbjct: 123 SVELPTTLVREIEYTEPAVKGDTSSGKVLKMAKIKGGFE-----IQVPLFCSTGDKIEID 177 Query: 180 TRTNEYK 186 TRT+EY+ Sbjct: 178 TRTHEYR 184 >NMA1133 [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) NmA Neisseria meningitidis Z2491 Length = 186 Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 100/189 (52%), Positives = 137/189 (72%), Gaps = 7/189 (3%) Query: 1 MKFAKEIRVGNIIMVDSKPMIVLRSDVNGSSRTGFTYKWKMKNLLTNSPLESVFRGDDKF 60 MK A+E+R GN+ MV + PM+V +++ R+ K+KNLLT + E++++ DDKF Sbjct: 1 MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNLLTGAASETIYKADDKF 60 Query: 61 DVVVLDKKPVTYSYFADPLYVFMDEEYNQYEIEGENMGDAIGYLKDGM--QCEAVFYEGK 118 DVV+L +K TYSYFADP+YVFMDEE+NQYEIE +N+GDA+ ++ DGM QCE FYEG Sbjct: 61 DVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALKFIVDGMEDQCEVTFYEGN 120 Query: 119 AISVEMPTTIVRKVAYSEPAVKGNTSGNVLKEAKIENAIEANQITVMVPLFVSQDDDIEI 178 ISVE+PT IVR+V Y+EPAVKG+TSG V+K A++ + +I VM ++ D IEI Sbjct: 121 PISVELPTIIVREVEYTEPAVKGDTSGKVMKTARL---VGGTEIQVMS--YIENGDKIEI 175 Query: 179 DTRTNEYKK 187 DTRT E++K Sbjct: 176 DTRTGEFRK 184 >NMB0937 [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Nme Neisseria meningitidis MC58 Length = 186 Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 99/189 (52%), Positives = 137/189 (72%), Gaps = 7/189 (3%) Query: 1 MKFAKEIRVGNIIMVDSKPMIVLRSDVNGSSRTGFTYKWKMKNLLTNSPLESVFRGDDKF 60 MK A+E+R GN+ MV + PM+V +++ R+ K+KNLLT + E++++ DDKF Sbjct: 1 MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNLLTGAASETIYKADDKF 60 Query: 61 DVVVLDKKPVTYSYFADPLYVFMDEEYNQYEIEGENMGDAIGYLKDGM--QCEAVFYEGK 118 DVV+L +K TYSYFADP+YVFMDEE+NQYEIE +N+GDA+ ++ DGM QCE FYEG Sbjct: 61 DVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALKFIVDGMEDQCEVTFYEGN 120 Query: 119 AISVEMPTTIVRKVAYSEPAVKGNTSGNVLKEAKIENAIEANQITVMVPLFVSQDDDIEI 178 ISVE+PT IVR+V Y+EPAVKG+TSG V+K A++ + +I VM ++ D +EI Sbjct: 121 PISVELPTIIVREVEYTEPAVKGDTSGKVMKTARL---VGGTEIQVMS--YIENGDKVEI 175 Query: 179 DTRTNEYKK 187 DTRT E++K Sbjct: 176 DTRTGEFRK 184 >PA2851 [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Pae Pseudomonas aeruginosa Length = 188 Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 97/193 (50%), Positives = 133/193 (68%), Gaps = 7/193 (3%) Query: 1 MKFAKEIRVGNIIMVDSKPMIVLRSDVNGSSRTGFTYKWKMKNLLTNSPLESVFRGDDKF 60 MK A+E R G + ++ P ++ +++ N S R K K+KNLLT + E+VF+ DDK Sbjct: 1 MKTAQEFRAGQVANINGAPWVIQKAEFNKSGRNAAVVKMKLKNLLTGAGTETVFKADDKL 60 Query: 61 DVVVLDKKPVTYSYFADPLYVFMDEEYNQYEIEGENMGDAIGYLKDGMQ--CEAVFYEGK 118 + ++LD+K VTYSYFADPLYVFMD E+NQYEIE +++ + +++DGM CEAVFY K Sbjct: 61 EPIILDRKEVTYSYFADPLYVFMDSEFNQYEIEKDDLEGVLTFIEDGMTDICEAVFYNDK 120 Query: 119 AISVEMPTTIVRKVAYSEPAVKGNTSGNVLKEAKIENAIEANQITVMVPLFVSQDDDIEI 178 ISVE+PTTIVR++AY+EPAV+G+TSG V+K A++ N E + V F D IEI Sbjct: 121 VISVELPTTIVRQIAYTEPAVRGDTSGKVMKTARLNNGAE-----LQVSAFCEIGDSIEI 175 Query: 179 DTRTNEYKKVVRG 191 DTRT EYK V+ Sbjct: 176 DTRTGEYKSRVKA 188 >FN0720 [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Fnu Fusobacterium nucleatum Length = 187 Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 81/191 (42%), Positives = 127/191 (66%), Gaps = 6/191 (3%) Query: 1 MKFAKEIRVGNIIMVDSKPMIVLRSDVNGSSRTGFTYKWKMKNLLTNSPLESVFRGDDKF 60 MK A+E+R G+ I + + P +VL+++ N S R K+KMKNL++ + ++V++ DDK Sbjct: 1 MKIAQELRAGSTIKIGNDPFVVLKAEYNKSGRNAAVVKFKMKNLISGNISDAVYKADDKM 60 Query: 61 DVVVLDKKPVTYSYFADPLYVFMD-EEYNQYEIEGENMGDAIGYLKDGMQCEAVFYEGKA 119 D + LDK YSY Y+F + E + + E++GE++GDA+ YL++ M + V+YE A Sbjct: 61 DDIKLDKVKAIYSYQNGDSYIFSNPETWEEIELKGEDLGDALNYLEEEMPLDVVYYESTA 120 Query: 120 ISVEMPTTIVRKVAYSEPAVKGNTSGNVLKEAKIENAIEANQITVMVPLFVSQDDDIEID 179 ++VE+PT + R+V Y+EP ++G+TSG V+K A+I E V VPLFV Q + I+ID Sbjct: 121 VAVELPTFVEREVTYTEPGLRGDTSGKVMKPARINTGFE-----VQVPLFVEQGEWIKID 175 Query: 180 TRTNEYKKVVR 190 TRTNEY + V+ Sbjct: 176 TRTNEYVERVK 186