BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0049.0073.p         (189 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp1241 [K] COG1510 Predicted transcriptional regulators Rso Ral...   250   1e-66
AGl1535 [K] COG1510 Predicted transcriptional regulators Atu Agr...   213   3e-55
BMEII0763 Non COG                                                     207   1e-53

>RSp1241 [K] COG1510 Predicted transcriptional regulators Rso Ralstonia
           solanacearum
          Length = 186

 Score =  250 bits (639), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 117/175 (66%), Positives = 141/175 (80%)

Query: 6   LSPLMQRFIGHFGEMGSRWGINRTVGQIYALLYICGRALNADEIADYLSFSRSNVSMGLK 65
           LSPL QRF+ HFGEMGSRWGINRTVGQIYALLY     +NADEIA+ L FSRSNVS+GLK
Sbjct: 3   LSPLKQRFVLHFGEMGSRWGINRTVGQIYALLYASREPINADEIAEALGFSRSNVSIGLK 62

Query: 66  ELQSWRLVKLLHKPNDRREYFEPPGDIWDIFKVLLEERRRREIEPTLSMLRDALLEPAGN 125
           EL+SW+LV+L HKP DRREYF  P DIW IF+ L EERR+REI+PTLS+LRD +LE  G+
Sbjct: 63  ELESWKLVRLTHKPGDRREYFSAPDDIWTIFRTLAEERRKREIDPTLSLLRDVMLESPGD 122

Query: 126 KDDKQVQQRMREMYELIELSSSWFDEVQRLSPETLVSLMKMGAKVKKLLDVREKF 180
            DD+  Q RM+EMY LI L ++WFD+VQ+L  + L  LMKMGAKV+KLL+++ K 
Sbjct: 123 PDDRHAQARMKEMYRLITLVTTWFDDVQKLDADALQQLMKMGAKVQKLLEMKNKL 177


>AGl1535 [K] COG1510 Predicted transcriptional regulators Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 214

 Score =  213 bits (541), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 100/175 (57%), Positives = 131/175 (74%)

Query: 6   LSPLMQRFIGHFGEMGSRWGINRTVGQIYALLYICGRALNADEIADYLSFSRSNVSMGLK 65
           LSPL+Q F+ HFGEMGSRWGINRTVGQ+YALLYI  + L ADEI + L  SRSNVSM LK
Sbjct: 27  LSPLVQSFVLHFGEMGSRWGINRTVGQVYALLYISPQPLCADEIVEALGISRSNVSMSLK 86

Query: 66  ELQSWRLVKLLHKPNDRREYFEPPGDIWDIFKVLLEERRRREIEPTLSMLRDALLEPAGN 125
           ELQ+W L  L H P DRR++F  P D+W I + L EER++REI+PTLS+LR+ L+E   N
Sbjct: 87  ELQAWNLAILKHFPGDRRDFFTTPDDVWQILRTLAEERKKREIDPTLSVLREILMETPEN 146

Query: 126 KDDKQVQQRMREMYELIELSSSWFDEVQRLSPETLVSLMKMGAKVKKLLDVREKF 180
           +D++  Q+R+ EM  LIE  + W+D+V+RL  E L SL+ +G+KV KLL+ ++K 
Sbjct: 147 EDERHAQRRIDEMKTLIEQLTGWYDDVKRLETERLASLLALGSKVTKLLEAKDKI 201


>BMEII0763 Non COG
          Length = 194

 Score =  207 bits (527), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 95/175 (54%), Positives = 129/175 (73%)

Query: 6   LSPLMQRFIGHFGEMGSRWGINRTVGQIYALLYICGRALNADEIADYLSFSRSNVSMGLK 65
           LSP++Q F+ HFGEMGSRWGINRTVGQIYALLY+    L ADEI + L  SRSNVSMG++
Sbjct: 3   LSPIVQSFVLHFGEMGSRWGINRTVGQIYALLYLSPEPLCADEIVEALGVSRSNVSMGIR 62

Query: 66  ELQSWRLVKLLHKPNDRREYFEPPGDIWDIFKVLLEERRRREIEPTLSMLRDALLEPAGN 125
           ELQ W LV L H P DRR++F  P D+W I + L EER++REI+PTLS+LR+ L+E   +
Sbjct: 63  ELQGWNLVLLKHIPGDRRDFFTTPDDVWQILRTLAEERKKREIDPTLSVLREVLMEQPQD 122

Query: 126 KDDKQVQQRMREMYELIELSSSWFDEVQRLSPETLVSLMKMGAKVKKLLDVREKF 180
             D+  Q RM++MY LIE  ++W+D+V++L  + L SL+ +GAKV + L+  ++ 
Sbjct: 123 DSDRYAQDRMKDMYSLIERLTNWYDDVKKLDTDRLTSLLALGAKVTRFLETTDRI 177