BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0049.0068.p (202 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0405 [T] COG1493 Serine kinase of the HPr protein, regulates ... 286 2e-77 NMB0737 [T] COG1493 Serine kinase of the HPr protein, regulates ... 209 3e-54 NMA0947 [T] COG1493 Serine kinase of the HPr protein, regulates ... 209 3e-54 XF1406 [T] COG1493 Serine kinase of the HPr protein, regulates c... 186 2e-47 SA0715 [T] COG1493 Serine kinase of the HPr protein, regulates c... 145 8e-35 >RSc0405 [T] COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism Rso Ralstonia solanacearum Length = 324 Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 145/206 (70%), Positives = 172/206 (83%), Gaps = 8/206 (3%) Query: 3 CDEKNIPLFSQ------VIDYLRVYLSKKLAQQITMHGVFMDVLGVGVLITGESGLGKSE 56 C + PLF+ VID+LR+YLS+ A ++TMHGVF+D+LG+GVLI G+SGLGKSE Sbjct: 110 CTRSSTPLFTSPISSAAVIDHLRLYLSRISAPRVTMHGVFLDILGMGVLIMGDSGLGKSE 169 Query: 57 LGLELISRSHGLVADDAVEFARIAPNMIEGRCPPLLANLLEVRGLGLLDIKAIFGETAVR 116 LGLELISR HGLVADDAV+F R+ P+ IEGRCPPLL NLLEVRGLGLLDIK IFGETAVR Sbjct: 170 LGLELISRGHGLVADDAVDFVRLGPDFIEGRCPPLLQNLLEVRGLGLLDIKTIFGETAVR 229 Query: 117 RKMRLKLIVHLVRRSTLEENYERLPLDAQYEEVLGLPIRKVVIPVAAGRNIAVLLEAAVR 176 RKM++KLIV LVRR+ E +ERLPLD+QY +VLGLPI V I VAAGRN+AVL+EAAVR Sbjct: 230 RKMKIKLIVQLVRRNDGE--FERLPLDSQYMDVLGLPIHMVKIQVAAGRNLAVLVEAAVR 287 Query: 177 NTILQLRGIDTLKEFIERQRRAMNGE 202 NTIL+LRGIDTL++F++RQR AM E Sbjct: 288 NTILRLRGIDTLRDFMDRQRAAMQAE 313 >NMB0737 [T] COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism Nme Neisseria meningitidis MC58 Length = 320 Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 107/204 (52%), Positives = 143/204 (70%), Gaps = 7/204 (3%) Query: 3 CDEKNIPLFSQ------VIDYLRVYLSKKLAQQITMHGVFMDVLGVGVLITGESGLGKSE 56 C + +IPL + ++D LR+YL + LA HGVF+DV +GVLITG SGLGKSE Sbjct: 105 CHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGLGKSE 164 Query: 57 LGLELISRSHGLVADDAVEFARIAPNMIEGRCPPLLANLLEVRGLGLLDIKAIFGETAVR 116 L LELISR H L+ADDAVE RI P +EGRC P+L + LEVRGLG+L+I+ IFGET++R Sbjct: 165 LALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIFGETSIR 224 Query: 117 RKMRLKLIVHLVRRST-LEENYERLPLDAQYEEVLGLPIRKVVIPVAAGRNIAVLLEAAV 175 K L+LI++LV + +RL + + E +L + +R V +PVA GRN+AVL+EAAV Sbjct: 225 PKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNLAVLVEAAV 284 Query: 176 RNTILQLRGIDTLKEFIERQRRAM 199 RN ILQLRG D+ +EF+ER + + Sbjct: 285 RNYILQLRGKDSTREFLERHQTQL 308 >NMA0947 [T] COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism NmA Neisseria meningitidis Z2491 Length = 320 Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 107/204 (52%), Positives = 143/204 (70%), Gaps = 7/204 (3%) Query: 3 CDEKNIPLFSQ------VIDYLRVYLSKKLAQQITMHGVFMDVLGVGVLITGESGLGKSE 56 C + +IPL + ++D LR+YL + LA HGVF+DV +GVLITG SGLGKSE Sbjct: 105 CHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGLGKSE 164 Query: 57 LGLELISRSHGLVADDAVEFARIAPNMIEGRCPPLLANLLEVRGLGLLDIKAIFGETAVR 116 L LELISR H L+ADDAVE RI P +EGRC P+L + LEVRGLG+L+I+ IFGET++R Sbjct: 165 LALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIFGETSIR 224 Query: 117 RKMRLKLIVHLVRRST-LEENYERLPLDAQYEEVLGLPIRKVVIPVAAGRNIAVLLEAAV 175 K L+LI++LV + +RL + + E +L + +R V +PVA GRN+AVL+EAAV Sbjct: 225 PKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNLAVLVEAAV 284 Query: 176 RNTILQLRGIDTLKEFIERQRRAM 199 RN ILQLRG D+ +EF+ER + + Sbjct: 285 RNYILQLRGKDSTREFLERHQTQL 308 >XF1406 [T] COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism Xfa Xylella fastidiosa 9a5c Length = 316 Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 96/203 (47%), Positives = 137/203 (67%), Gaps = 8/203 (3%) Query: 1 VVCDEKNIPLF------SQVIDYLRVYLSKKLAQQITMHGVFMDVLGVGVLITGESGLGK 54 D IPL+ +++++L +L++ LA + T+HGVFM++ +GVLITGE+G GK Sbjct: 105 TAADNSQIPLWVSPKRGHELLNHLSYHLARILAPRATLHGVFMEIYSIGVLITGEAGSGK 164 Query: 55 SELGLELISRSHGLVADDAVEFARIAPNMIEGRCPPLLANLLEVRGLGLLDIKAIFGETA 114 SEL LEL+SR H LVADDA EF +IAP++++G CP +L +LLEVRGLG+L+++ +FG+TA Sbjct: 165 SELALELLSRGHRLVADDAPEFTQIAPDVLDGTCPEILQDLLEVRGLGVLNVRHMFGDTA 224 Query: 115 VRRKMRLKLIVHLVRRST--LEENYERLPLDAQYEEVLGLPIRKVVIPVAAGRNIAVLLE 172 +++ L+LIVHL + T YERL D+ VL L + + +PV GRN+AVL E Sbjct: 225 IKKNKYLRLIVHLTKPITEPTPSGYERLTGDSGTRHVLDLDVPLITLPVMPGRNLAVLTE 284 Query: 173 AAVRNTILQLRGIDTLKEFIERQ 195 AA R IL+ +GID FI R Sbjct: 285 AATRLHILRTKGIDPATMFIARH 307 >SA0715 [T] COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism Sau Staphylococcus aureus N315 Length = 310 Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 80/198 (40%), Positives = 124/198 (62%), Gaps = 7/198 (3%) Query: 3 CDEKNIPLF------SQVIDYLRVYLSKKLAQQITMHGVFMDVLGVGVLITGESGLGKSE 56 E N PL + ++ L +L LA+ ++HGV +DV GVGVLITG+SG+GKSE Sbjct: 100 AKELNTPLIVAKDATTSLMSRLTTFLEHALAKTTSLHGVLVDVYGVGVLITGDSGIGKSE 159 Query: 57 LGLELISRSHGLVADDAVEFARIAPNMIEGRCPPLLANLLEVRGLGLLDIKAIFGETAVR 116 LEL+ R H LVADD VE +I + + G+ P L+ +LLE+RGLG++++ +FG ++ Sbjct: 160 TALELVKRGHRLVADDNVEIRQINKDELIGKPPKLIEHLLEIRGLGIINVMTLFGAGSIL 219 Query: 117 RKMRLKLIVHLVRRSTLEENYERLPLDAQYEEVLGLPIRKVVIPVAAGRNIAVLLEAAVR 176 + R++L ++L + ++ Y+R+ L+ + +L I K IPV GRN+AV++E A Sbjct: 220 TEKRIRLNINLENWNK-QKLYDRVGLNEETLSILDTEITKKTIPVRPGRNVAVIIEVAAM 278 Query: 177 NTILQLRGIDTLKEFIER 194 N L + GI+T +EF ER Sbjct: 279 NYRLNIMGINTAEEFSER 296