BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0049.0038.p (214 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2936 [C] COG3038 Cytochrome B561 Pae Pseudomonas aeruginosa 155 5e-38 AGc2735 [C] COG3038 Cytochrome B561 Atu Agrobacterium tumefacien... 76 7e-14 yceJ [C] COG3038 Cytochrome B561 Eco Escherichia coli K12 67 4e-11 YPO2974 [C] COG3038 Cytochrome B561 Ype Yersinia pestis 66 5e-11 Z1693 [C] COG3038 Cytochrome B561 EcZ Escherichia coli O157:H7 E... 65 9e-11 >PA2936 [C] COG3038 Cytochrome B561 Pae Pseudomonas aeruginosa Length = 193 Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 91/189 (48%), Positives = 122/189 (64%), Gaps = 13/189 (6%) Query: 13 AKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIPLLNIHWVLGVSI 72 +L HWSMA FI A ++ Y+VIW + + + +P+LN+HWVLG+ + Sbjct: 12 TRLLHWSMAFCFIGAIVLAYFVIWVLGHDHPQR-------------LPVLNLHWVLGLLV 58 Query: 73 GVLVVPRLVWRLVNVEPAPVPGSALEHLLARLAHWALYLFMIVMPLTGYLNTYDPTNFGL 132 G+L+VPR+V RL VPG+ LEH LA AH +LY M+VMPLTGY+ T PT+FGL Sbjct: 59 GLLLVPRIVSRLRGPRLPAVPGTPLEHRLAHYAHLSLYALMLVMPLTGYVGTRLPTDFGL 118 Query: 133 FVIPAFRETALFAWIASTWQLTAEQVETPIFAVHKFLGDWVVWVVVALHVAAAIFHHRVR 192 FV+P+F++TALFAWI+ T L+ E E P AVH+ +G W+ VV LH AA +H VR Sbjct: 119 FVVPSFKDTALFAWISQTLNLSWEAFEKPFDAVHRVVGLWLSTSVVLLHALAAGYHQWVR 178 Query: 193 KDATLTRML 201 +D TL RML Sbjct: 179 RDGTLERML 187 >AGc2735 [C] COG3038 Cytochrome B561 Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 214 Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 34/207 (16%) Query: 3 KNTTERFGSIAKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIPLL 62 +NT FG +A FHW++AV F+ A + + Y++ SI P L Sbjct: 19 RNTPSSFGVVAIAFHWTIAVLFV-AQLALGYLM----SRDSIDPVL---------QFNFF 64 Query: 63 NIHWVLGVSIGVLVVPRLVWRLVNVEPAPVPGSA-LEHLLARLAHWALYLFMIVMPLTGY 121 H +G + L VPR +W + + +P V G + AR+AH AL + +PL G+ Sbjct: 65 QYHKSIGFLVLALAVPRCLWSVFSRKPRAVDGEGPVSRFAARVAHSALLFLTLAVPLAGW 124 Query: 122 -LNTYDPTN-----FGLFVIPAFRETALFAWIASTWQLTAEQVETPIFAVHKFLGDWVVW 175 + + P F L V+P T ++Q E VH L ++ Sbjct: 125 AVASTSPLQIPSYVFDLVVVPGLPMT------------ISDQAEAFWSDVHATLA-YLAA 171 Query: 176 VVVALHVAAAIFHHRVRKDATLTRMLP 202 V+V LHV AA++HH +R+D TL RMLP Sbjct: 172 VIVLLHVIAALWHHFIRRDPTLRRMLP 198 >yceJ [C] COG3038 Cytochrome B561 Eco Escherichia coli K12 Length = 188 Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 27/200 (13%) Query: 4 NTTERFGSIAKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIPLLN 63 NT ER+G I+ FHW ++ I+ Y + +W + S + P Sbjct: 5 NTPERYGVISAAFHW---LSAIIVYGMFALGLWMV--TLSYYDGWYHKAPE--------- 50 Query: 64 IHWVLGVSIGVLVVPRLVWRLVNVEPAPVPG-SALEHLLARLAHWALYLFMIVMPLTGYL 122 +H +G+ + + +V R++WR+++ P P+P S + L AR H ALYL + + ++GYL Sbjct: 51 LHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAARAGHLALYLLLFAIGISGYL 110 Query: 123 -NTYDPTNFGLFVIPAFRETALFAWIASTWQLTAEQVETPIFAVHKFLGDWVVWVVVALH 181 +T D + ++F W L + F W V V+ +H Sbjct: 111 ISTADG-----------KPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMH 159 Query: 182 VAAAIFHHRVRKDATLTRML 201 A+ HH + KD TL RML Sbjct: 160 GFMALKHHFIDKDDTLKRML 179 >YPO2974 [C] COG3038 Cytochrome B561 Ype Yersinia pestis Length = 174 Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 12/143 (8%) Query: 63 NIHWVLGVSIGVLVVPRLVWRLVNVEPAPVPGSALEHLLA-RLAHWALYLFMIVMPLTGY 121 N+H+ G+S+ +L++ RL R N PA P LL R++HW LYL + +P+ G+ Sbjct: 43 NLHFNFGISVWLLMLVRLWLRQRNPTPAISPPLPHWQLLGVRISHWGLYLMFLSLPILGF 102 Query: 122 LNTYDPTNFGLFVIPAFRETALFAWIASTWQLTAEQVETPIFAVHKFLGDWVVWVVVALH 181 L +G R L W W V + H F+ + + + V+ +H Sbjct: 103 LTQ----AYG------GRTWLLLGWQVPQWLTPNTDVRDYLKQTHVFIAN-LGYFVIGIH 151 Query: 182 VAAAIFHHRVRKDATLTRMLPAA 204 AA++HH +R+D TL RM+P Sbjct: 152 GVAALYHHYIRRDDTLRRMMPGK 174 >Z1693 [C] COG3038 Cytochrome B561 EcZ Escherichia coli O157:H7 EDL933 Length = 188 Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 27/200 (13%) Query: 4 NTTERFGSIAKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIPLLN 63 NT ER+G I+ FHW ++ I+ Y + +W + S + P Sbjct: 5 NTPERYGVISAAFHW---LSAIIVYGMFALGLWMV--TLSYYDGWYHKAPE--------- 50 Query: 64 IHWVLGVSIGVLVVPRLVWRLVNVEPAPVPG-SALEHLLARLAHWALYLFMIVMPLTGYL 122 +H +G+ + + +V R++WR+++ P P+P S + L A+ H ALYL + + ++GYL Sbjct: 51 LHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAAKAGHLALYLLLFAIGISGYL 110 Query: 123 -NTYDPTNFGLFVIPAFRETALFAWIASTWQLTAEQVETPIFAVHKFLGDWVVWVVVALH 181 +T D + ++F W L + F W V V+ +H Sbjct: 111 ISTADG-----------KPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMH 159 Query: 182 VAAAIFHHRVRKDATLTRML 201 A+ HH + KD TL RML Sbjct: 160 GFMALKHHFIDKDDTLKRML 179